Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01145 | ATGTGTGTGACGGATTCCGAGCCGGTTGGGGCTGAGAGGGCGCCTTCTGGGAGTACTAATAGCAAGCCATGGCGCATGCATTGTGAATTTTTGGAGACCCAGATGGGGAATCCTGATCAGGAGCTTGATCTTGGTGGAACTAGCGACCTAACCCGTTCTGGGAATTCTTTTCCTCTCGAGAGCATTTCCGAGGACGCTGCAGTGGTAGACAGGAAAGAGAGCCCATCGACTTTTGTTCCTGCGCTTAGATCGGGAGAATGGTCTGATATCGGAAAGCGTCCGTATATGGAGGACACTCATGTATGCATTCAGGACATGGCTAAGAAGTTCGGGTGTAGTTTCGTCAACGAGGAAGCGGTCTCCTTCTATGGTTCGGGTAAGGGGAGGCCTGAGATTTTACATGGACGTTGCAAACCCCGTTCCGCTCCTGTAATCGGAATCAACCAAGCTCTCGGATCTTTACTTGTAGCAAACGCTGGCGATTGCCGAGCAGTGTTATCAAGACAAGGATGTGCAATAGAAATGTCTAAAGACCACAGACCATGCTGCACAAAAGAACGTAAGAGAATCGAGGCGTTAGGCGGATTCATCGACGACGATTACCTAAACGGACTACTTGGGGTCACTCGTGCGTTAGGAGACTGGCATCTTGAAGGAATGAAGGAAATGAGCGAGAGAGGTGGACCGTTAAGCGCCGAACCCGAACTTAAACTAATAACATTGACGAAGGAGGAGGAGTTTTTGATCATAGGGAGTGACGGAATATGGGACGTGTTCACGAGTCAAAACGCTATCGACTTTGCTCGTCGGAGGCTCCTAGAACACAACGACGTGAAGCTTTGCTGCAAGGAAATAGTAGAAGAAGCCATAAAGAGAGGAGCCACGGACAACTTAACAGTGGTGTTGGTTAGCTTTCATTTGGAGCCACCTGAGCCTGTGGTGTTTCAGAGGCCAAGATTTAGACGAAGCATTTCAGCTGAAGGGCTTCAGAACCTGAAATTTCTGCTAGAGGGATAG | 1017 | 49.26 | MCVTDSEPVGAERAPSGSTNSKPWRMHCEFLETQMGNPDQELDLGGTSDLTRSGNSFPLESISEDAAVVDRKESPSTFVPALRSGEWSDIGKRPYMEDTHVCIQDMAKKFGCSFVNEEAVSFYGSGKGRPEILHGRCKPRSAPVIGINQALGSLLVANAGDCRAVLSRQGCAIEMSKDHRPCCTKERKRIEALGGFIDDDYLNGLLGVTRALGDWHLEGMKEMSERGGPLSAEPELKLITLTKEEEFLIIGSDGIWDVFTSQNAIDFARRRLLEHNDVKLCCKEIVEEAIKRGATDNLTVVLVSFHLEPPEPVVFQRPRFRRSISAEGLQNLKFLLEG | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 10019791 | 10025374 | - | Cp4.1LG07g10950.1 | Cpe07g01145 | 472952 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01145 | 338 | CDD | PP2Cc | 152 | 305 | IPR001932 | - | |
Cpe07g01145 | 338 | SMART | PP2C_4 | 73 | 303 | IPR001932 | - | |
Cpe07g01145 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C | 153 | 326 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe07g01145 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 126 | IPR015655 | GO:0004722|GO:0006470 | |
Cpe07g01145 | 338 | SUPERFAMILY | PP2C-like | 153 | 306 | IPR036457 | - | |
Cpe07g01145 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 153 | 326 | - | - | |
Cpe07g01145 | 338 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 126 | - | - | |
Cpe07g01145 | 338 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Cpe07g01145 | 338 | Pfam | Protein phosphatase 2C | 154 | 297 | IPR001932 | - | |
Cpe07g01145 | 338 | ProSiteProfiles | PPM-type phosphatase domain profile. | 83 | 305 | IPR001932 | - | |
Cpe07g01145 | 338 | Gene3D | - | 131 | 313 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g01145 | Cpe-Chr7:10019791 | Cpe17g00726 | Cpe-Chr17:5769558 | 3.21E-56 | dispersed | |
Cpe11g01025 | Cpe-Chr11:8632574 | Cpe07g01145 | Cpe-Chr7:10019791 | 2.87E-178 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49804 | PF00481 | PP2C | 4.90E-46 | CL0238 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01145 | K14803 | - | csv:101210349 | 536.954 |