Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01145 ATGTGTGTGACGGATTCCGAGCCGGTTGGGGCTGAGAGGGCGCCTTCTGGGAGTACTAATAGCAAGCCATGGCGCATGCATTGTGAATTTTTGGAGACCCAGATGGGGAATCCTGATCAGGAGCTTGATCTTGGTGGAACTAGCGACCTAACCCGTTCTGGGAATTCTTTTCCTCTCGAGAGCATTTCCGAGGACGCTGCAGTGGTAGACAGGAAAGAGAGCCCATCGACTTTTGTTCCTGCGCTTAGATCGGGAGAATGGTCTGATATCGGAAAGCGTCCGTATATGGAGGACACTCATGTATGCATTCAGGACATGGCTAAGAAGTTCGGGTGTAGTTTCGTCAACGAGGAAGCGGTCTCCTTCTATGGTTCGGGTAAGGGGAGGCCTGAGATTTTACATGGACGTTGCAAACCCCGTTCCGCTCCTGTAATCGGAATCAACCAAGCTCTCGGATCTTTACTTGTAGCAAACGCTGGCGATTGCCGAGCAGTGTTATCAAGACAAGGATGTGCAATAGAAATGTCTAAAGACCACAGACCATGCTGCACAAAAGAACGTAAGAGAATCGAGGCGTTAGGCGGATTCATCGACGACGATTACCTAAACGGACTACTTGGGGTCACTCGTGCGTTAGGAGACTGGCATCTTGAAGGAATGAAGGAAATGAGCGAGAGAGGTGGACCGTTAAGCGCCGAACCCGAACTTAAACTAATAACATTGACGAAGGAGGAGGAGTTTTTGATCATAGGGAGTGACGGAATATGGGACGTGTTCACGAGTCAAAACGCTATCGACTTTGCTCGTCGGAGGCTCCTAGAACACAACGACGTGAAGCTTTGCTGCAAGGAAATAGTAGAAGAAGCCATAAAGAGAGGAGCCACGGACAACTTAACAGTGGTGTTGGTTAGCTTTCATTTGGAGCCACCTGAGCCTGTGGTGTTTCAGAGGCCAAGATTTAGACGAAGCATTTCAGCTGAAGGGCTTCAGAACCTGAAATTTCTGCTAGAGGGATAG 1017 49.26 MCVTDSEPVGAERAPSGSTNSKPWRMHCEFLETQMGNPDQELDLGGTSDLTRSGNSFPLESISEDAAVVDRKESPSTFVPALRSGEWSDIGKRPYMEDTHVCIQDMAKKFGCSFVNEEAVSFYGSGKGRPEILHGRCKPRSAPVIGINQALGSLLVANAGDCRAVLSRQGCAIEMSKDHRPCCTKERKRIEALGGFIDDDYLNGLLGVTRALGDWHLEGMKEMSERGGPLSAEPELKLITLTKEEEFLIIGSDGIWDVFTSQNAIDFARRRLLEHNDVKLCCKEIVEEAIKRGATDNLTVVLVSFHLEPPEPVVFQRPRFRRSISAEGLQNLKFLLEG 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10019791 10025374 - Cp4.1LG07g10950.1 Cpe07g01145 472952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01145 338 CDD PP2Cc 152 305 IPR001932 -
Cpe07g01145 338 SMART PP2C_4 73 303 IPR001932 -
Cpe07g01145 338 PANTHER PROTEIN PHOSPHATASE 2C 153 326 IPR015655 GO:0004722|GO:0006470
Cpe07g01145 338 PANTHER PROTEIN PHOSPHATASE 2C 1 126 IPR015655 GO:0004722|GO:0006470
Cpe07g01145 338 SUPERFAMILY PP2C-like 153 306 IPR036457 -
Cpe07g01145 338 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 153 326 - -
Cpe07g01145 338 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 126 - -
Cpe07g01145 338 MobiDBLite consensus disorder prediction 1 23 - -
Cpe07g01145 338 Pfam Protein phosphatase 2C 154 297 IPR001932 -
Cpe07g01145 338 ProSiteProfiles PPM-type phosphatase domain profile. 83 305 IPR001932 -
Cpe07g01145 338 Gene3D - 131 313 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01145 Cpe-Chr7:10019791 Cpe17g00726 Cpe-Chr17:5769558 3.21E-56 dispersed
Cpe11g01025 Cpe-Chr11:8632574 Cpe07g01145 Cpe-Chr7:10019791 2.87E-178 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49804 PF00481 PP2C 4.90E-46 CL0238 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01145 K14803 - csv:101210349 536.954