Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01153 ATGGCGGAGATTCTCGACGGGGAAGTTTACAAATACTATTCCGAAGGTGAGTGGAAGAAATCCTCCTCCGGGAAGAGCGTCGCCATTATCAACCCCACTACGAGGAAGACGCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATCAAGTGATGGAAATAGCCAAAACTGCTCAGAAATTATGGGCTAAGACTCCATTGTGGAAGAGAGCTGAGCTTCTTCATAAGGCAGCTGCAATTTTGAAAGAACATAAAGCACCCATTGCTGAGTGTTTGGTGAAGGAAATTGCAAAACCAGCTAAAGATGCAGTGACTGAGGTTGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGATCTTGGGAGAAGGGAAGTTCTTGGTTTCTGATAGTTTTCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCACTTGGTGTGATCTTAGCCATTCCTCCATTTAACTATCCTGTCAATCTGGCTGTCTCGAAAATTGCACCGGCTTTGATTGCTGGAAATTCGATCGTCCTCAAGCCTCCAACTCAGGCATCAACTAATGGCCAAAGGTGCACCGCCGTCAAGGTTGTTTTGGTAATGGAGTCCGTAGCAGATGCTTTGGTTGAGAAAGTAAATGCCCGGGTGGCTAAACTAACCGTCGGTGCCCCGGAAGACGACTCAGACATTACTCCAGTCGTGACCGAGTCGTCGGCAAATTTCATCGAAGGGTTGGTAATGGATGCAAAGGAAAAGGGAGCAACATTTTGCCAGGAGTACAGAAGAGAAGGCAACCTGATATGGCCCTTGTTGTTAGATAATATTAGACCTGATATGAGGATTGCATGGGAAGAACCCTTTGGACCAGGATGTGTCTTCACAAAGGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGGACAGTTCAAATCAACTCTGCACCCGCTCGAGGACCCGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGCTCTCAAGGAGTGACCAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTGATCAACTTGCCAACGCCTTCCTACACCATGGGTTAG 1116 46.59 MAEILDGEVYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNQVMEIAKTAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQASTNGQRCTAVKVVLVMESVADALVEKVNARVAKLTVGAPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDNIRPDMRIAWEEPFGPGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMG 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10092621 10096606 + Cp4.1LG07g10870.1 Cpe07g01153 472960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01153 371 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 192 IPR016162 GO:0016491
Cpe07g01153 371 PANTHER ALDEHYDE DEHYDROGENASE 2 192 - -
Cpe07g01153 371 PANTHER ALDEHYDE DEHYDROGENASE 192 295 - -
Cpe07g01153 371 PANTHER ALDEHYDE DEHYDROGENASE 296 371 - -
Cpe07g01153 371 SUPERFAMILY ALDH-like 9 363 IPR016161 GO:0016491
Cpe07g01153 371 Pfam Aldehyde dehydrogenase family 296 358 IPR015590 GO:0016491
Cpe07g01153 371 Pfam Aldehyde dehydrogenase family 18 192 IPR015590 GO:0016491
Cpe07g01153 371 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 191 202 IPR016160 GO:0016491
Cpe07g01153 371 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 297 330 IPR016163 GO:0016620
Cpe07g01153 371 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 193 295 IPR016163 GO:0016620
Cpe07g01153 371 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 331 358 IPR016162 GO:0016491
Cpe07g01153 371 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 192 - -
Cpe07g01153 371 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 192 295 - -
Cpe07g01153 371 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 296 371 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01153 Cpe-Chr7:10092621 Cpe17g00066 Cpe-Chr17:391085 6.29E-12 dispersed
Cpe07g00985 Cpe-Chr7:8924751 Cpe07g01153 Cpe-Chr7:10092621 2.80E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01153 K00131 - egr:104439326 594.734