Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01154 ATGAGAAAACTCACCAACTCCCTCCCCGACCGCCATAGCAACCGCCGCAACCGGCCGCCAGAGACCGATGCCTCTCAACTCCACCACCACCAAAACCACCTTCAAACCTCTCATCTCCATCCCTCTTCCTTCTCCTCCGACGATTTCCTCGACCAAATCCTCTCCTCCATCCCCCTTCCCTGGGAACTCCCTACCGGTCTTCCAAATCCCCACTCAAACCTCCCTCCTCAGCCACCGCAAATCTCGCGAAATTCCGACAATGCCGCTTTTCAGATCGGCGACACCACTCCAGCCGCCAAAATGGCCATGGCCATGCTTCACCAGCAGTTACTCACCACCGCGGCAGATTCCAGTCTCCTTACATTGCCTGGAAACGACGTCGTTGAAGTCGAAGGCTCTCCGTCCTTCAAATGCCCTAATCCGATTATCGTCGACGGTTCCGTCAATCCGTCGCTCTTCAACGAATTCACCGGATTCCTCAACGCCTCCGGCTCCAGCCATAGCCATAACCAGAATCAATCTCAGGCAATAAGTAGTTCGATTCGATCGGAAATTCAACTTCAACTTCACAGAAACAGAGCTTCGGAGCTCCAGTATCAGCCAATACTACACCTCCGGTGGGGACTGGTTCCGGCGGTGGTGCTAGCGCAGCGGCGCAGCCGCGACAGAGAGTCAGAGCTCGGCGAGGTCAAGCGACGGATCCTCACATTACGGAGAGAGCGAATTGCAGAGAGAATGAAAGCTCTACAAGAACTGGTTCCCAACGCTAACAAGACAGACAAGGCGTCAATGCTGGATGAGATCATAGACTACGTAAAGTTCCTCCAGCTTCAAGTCAAAGTTCTGAGTATGAGCAGGCTGGGCGGCGCCACTGCCTCCTTGCCTTCCCAACCTGTCGCCGACATGTCCTCCCACTCTGAGGCGTTCGCTGGGGCTCCGGCAAGTAATGACACGATGACGGTGACGGAGCATCAGGTGGTGAAGTTAATGGAGAAGGACATGGGCTCCGCCATGCAGTACTTACAAGGCAAAGGCCTTTGTCTCATGCCCATCTCTCTAGCCACCGCTATCTCCACCGCCACATGTCACAGCCGCCCTGTTACAGCCTCTAGAGGCGGCGGAGATCGCCCCACCTCACCCAGCCTGTCGGCGTTGACCGTTCAGTCAACCGCCTTGGGTAACGGCACCGGAAGAATTTTGTAA 1203 55.53 MRKLTNSLPDRHSNRRNRPPETDASQLHHHQNHLQTSHLHPSSFSSDDFLDQILSSIPLPWELPTGLPNPHSNLPPQPPQISRNSDNAAFQIGDTTPAAKMAMAMLHQQLLTTAADSSLLTLPGNDVVEVEGSPSFKCPNPIIVDGSVNPSLFNEFTGFLNASGSSHSHNQNQSQAISSSIRSEIQLQLHRNRASELQYQPILHLRWGLVPAVVLAQRRSRDRESELGEVKRRILTLRRERIAERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATASLPSQPVADMSSHSEAFAGAPASNDTMTVTEHQVVKLMEKDMGSAMQYLQGKGLCLMPISLATAISTATCHSRPVTASRGGGDRPTSPSLSALTVQSTALGNGTGRIL 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 10099747 10103858 + Cp4.1LG07g10880.1 Cpe07g01154 472961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01154 400 Gene3D - 232 290 IPR036638 GO:0046983
Cpe07g01154 400 PANTHER TRANSCRIPTION FACTOR BHLH69 41 176 - -
Cpe07g01154 400 MobiDBLite consensus disorder prediction 1 41 - -
Cpe07g01154 400 CDD bHLH_AtbHLH_like 238 283 IPR045239 -
Cpe07g01154 400 SMART finulus 228 281 IPR011598 GO:0046983
Cpe07g01154 400 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 176 - -
Cpe07g01154 400 Pfam Helix-loop-helix DNA-binding domain 238 276 IPR011598 GO:0046983
Cpe07g01154 400 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 237 370 - -
Cpe07g01154 400 MobiDBLite consensus disorder prediction 1 28 - -
Cpe07g01154 400 PANTHER TRANSCRIPTION FACTOR BHLH69 237 370 - -
Cpe07g01154 400 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 285 IPR036638 GO:0046983
Cpe07g01154 400 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 226 275 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01154 Cpe11g01019 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01154 Cpe-Chr7:10099747 Cpe18g00556 Cpe-Chr18:6104913 6.51E-78 dispersed
Cpe11g01019 Cpe-Chr11:8583989 Cpe07g01154 Cpe-Chr7:10099747 1.82E-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49806 PF00010 HLH 3.30E-06 No_clan Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01154 - - csv:101222794 433.721