Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00047 ATGGAAAACCCCTTTTCGTCCAAGGAGGAAGGGATGATGGGGTATTGGGGACCTTCCAGAACTCAGGCCGAAACTATGAATTCCACTGACGCTGGAATGAGGATTTTGAGTCCTGAAGATGTCCTCCCCACCTTCTCTGACATGATGAATTTTGATTCTTATGCGGCAATCGATCAGATTTTCACATCTTGTGGGTTTTCATCGATGCCCCAAATGAGTACTTGCGGTTCTATCGAGGGCTTGTCTTTTGTAGAAGGGGGGTGCCATGAAGGATTCCCTCTGAATGAACATGGTGGAGCTTCTATTTCCATGGCGAATTCTTTTACTTGTGGGGACAAGGCGATGTTTCAGCTGCCAGACACTGAATTTGGGGTGTCTAATGTTTCGGACAACGCAAACAAAGTAGATTCTAAATCAAATGATGTCCCTGTAGACATGGATAGCTGTCTGATCTCTAGGCCGTTTGGTTGGTCACTTGATGAGAAAATGCTGAGGGTTTTATCCATGTTTAAAGAGTCATCACCTGGAGGTATTTTGGCTCAAGTCTGGGTTCCTGTGAAGCATGGAGACCAATTCTTCTTGAGCACCAGCGAGCAGCCATATTTGCTTGATCAAATGCTCACAGGGTACCGTGAAGTGTCGAGGTCGTTTACATTCTCAGCAGAAGGAAAACTGGGTTCTCTCCTTGGGCTTCCTGGTCGTGTTTTCACCTCCAAACTCCCAGAATGGACATCAAATGTTAGATATTACAGTGACCACGAGTATCTGAGAATGCAACATGCAATCGGTCATGACGTTTATGGATCGATTGCCTTACCGGTATTCAATAACGAAGTCGAAAAATCATGCTGTGCCGTACTTGAAGTTGTTACTACAAAGGAGAAGCCCAATTTTGATGCAGAAATCGACATTGTTTCCCAAGCACTAGAGACTGTTAGCTTGAGCACTGTTCCGCCTCCTCGACTATATTCGCAGTGCTTGAAGAAGAACCAGAGAGCTGCACTGGCGGAGATAGTGGACGTGCTACGTGTTGTATGTCATGCACATAGACTACCTCTTGCCCTAACCTGGATTCCTTGTTGTTATTCTTTCGACGCCGTTGATGAGGTTGCAAGAGTTCGTGTTAAGGAGAACAACATTAACCCAGAGGAGAAATTTGTATTATGTATTGAGGAAACAGCATGTTATGTGAATGACAAATCAACTCAAGGATTCGTGCATGCATGTCTGGAGCATCATCTTGAAGAAGGGCAAGGGATAGCTGGGAAAGCTCTTCAATCTAATCATCCCTTCTTTTATCCTGACGTGAAGGCATATGATATTAATAAATATCCGCTGGTCCATCACGCACGCAAGTTCGGTTTGAATGCTGCAGTTGCAATCAGGCTGAGAAGCATGTACACCGGCAACGATGATTATATACTTGAATTCTTTCTACCTGTCAATATGAAAGGAGCTGCAGAACAACAACTATTGTTAAACAATCTCTCTGTTACCATGCAAAGAATGTGCAGGAGTTTGAGGACAGTTTCAAAGGAAGAACTAATAGGGGCTGAGGATTCTGTTGTTGACTTTCAGAGTGGATTAATTGGGAAGTCCACAACTACATCAATGAGAAACTCGCAATCCACGGTAACAGACAGTGAAACAAGGGTGTCTAACTCGATAAATAATGGAGCTGAAGCGGAATGTCCTGAGAAGCAGATGACTGATGGATCATGGAAGCAGGGTGAGAAAAAACGTAGCACATCCGAAAAAAACGTGAGCTTGAGTGTTCTACAGCAATATTTTTCTGGGAGTCTCAAGGATGCAGCAAAGAGCATTGGTGAACTCAATGCACAAAATAGTCTTCTCTTCTCTGATAATAACCCAGCTATACCAAACCTTGACCTGTTCCTTCATGACGTAAATTCGGTTCCTTCGGCCCCTTTCAATACTCAGAATTCTGCCATCAAACTGGAAATGGACGAGTCTTCCGTTTCTATATCCCAAAGAACGTCATCGAGGGGTGTTCTCATTCCAGAGAAGGAACCGAACGTTCGCCAGCATGATTGTAGTGAAGGTTTGGAGTCCGCTGGTGTAGATGCTGCATCATGCCAGCTTGCTGATCTGGATATGATGAGTTGGGATGTCCAAGGGAATGCCTCAGTTTCTATTGCTGCTAAAAAAAGTGACAGATTGGATTTTGTGAAGAACGATTTGAGATCAGGAGATGCCGACTGCCAATTTATGGCCAAGAGCTCGATCTCTTTTGCAGCTGCTGATGAAGTCGGTACCGTGTTGAATGAACATTACCAGCCAACTACTTCGAGCATGACCGACTCATCAAATGGCTCTGGCTTAATGATTCATGGCAGTTCATCTAGCAGTCAGAGCGTCGAGAGGAAGCATTTGCCAGAAAAAGTTGGCTCGGTTGACAGCGAATCCAAGATTATTGTAAAAGCTTCATACAAAGACGACACAGTTCGATTCAAGTTCGATCCTTGTTTAGGATATCTCCAGCTCTACGAAGAAGTTGGCATGCGATTCAAGCTAAACCAAGGAACATTTCAACTCAAATACCTAGACGATGAAAAAGAATGGGTGATGCTAGTAAGCAATTCAGACTTACAGGAATGTCTCGAGGTGATGGACGAAATCGGCACGAGAAATGTGAGGCATCCCTCCTACCCATTACCAGCCACCGCGTTTTACCCGCGGCACCCCGAATCCTGCAGGTTGTTCCTGCCCGACGCTGTCTCAGTCGCCGCCGCAGTCTGCACTTTCAGCCTTCCCGCTGCTTTCTTCCTCTCCCTCTATTTCAGAAACTCAGTGGTTCAGCATTTTACCCGCGTCAGGGTTAATCTCTCACTACTCCAAGGAGGCTTTCATTTCGCCTTGGATATGGGGAAGAAACGTAATAACGAGAAACAGAAGGTAATTCTACCGCCGGACCTTCCACCAGAGGTTACCGAGGAAGAAATTGAGGTCTCCGATGAGGATTTGGAGTTTGTCAAGGAGAACCAGGACTATGCCGTCTCTGTTACTCGTCTAGACACTAAATCCATTACCAAGCATGTTACACGTGTTGCTAATGTTGAAGAAGATGCTTTGGAGGTTTTATATGAGAAGCGTCTGCGCAAGAAGCCACTGCCGAAACCGGAGGAGGAAAATAAGACCCAGGTTGATCGTGTAGATGCTCTTCCTGTCAAAACACTTGAGGGGGAACTTTACTACCGGACATGTATATCTTACTTGTCTTCTTTGTCTCATATTATGTCCAGCTACATTTGCATATTCACTCTCTTACTGCTTGCAGCAAAAACATCTGATGCACCTGAAGATGGTGGGAACGAAGAGGCAATGGAAGAGGACAGGGTAGATAATGGTGTATTGAAGTTAACTAAAGCGGAAAGGAGGGCAAAGCTGAAGAAAACTAAAAAGGTTGCCAAGAAACAAGAGGATGTGACCAAAGCTGAAGAAGTTAAACCAACCCCACAAGCAGCAGTTTTGGCGGAAGTGGTAGAAGATCTTACTGCTGAAAAGACATTTGAAAGTAAGAAGCAGAAACTTGCGGAGCTTGGAATTGCGTTGCTGGCAGACCCAAATTCCAATATTAAGTCTCTGAAGGACATGCTACAGATTGTTAAGGATAATGATCAAGCAATTGTGAAACTTGGACTTCTATCATTATTGGCTGTTTTTAAAGACATTATACCTGGTTATCGGATTCGGCTTCCTACAGAAAAGGAGCTAGAAGTTAAAGTATCCAAGGATGTCAAGAAAATGCGGTACTATGAGTACACTCTTCTCACTACTTATAAGGGATACCTGCAGAAGCTGATGTCATTGGAGAAATCTACGGCATTTCAGCATATTGTTATTCGCTGTATCTGTACGTTGCTTGATGCAGTTCCCCACTTCAATTTTCGAGAGACATTGTTAGGCATTGTTGTTCAAAATATAAGCTCCCCTGATGATGTTGTTAGAAAACTCTGTAGTGGTGCTATTAAGTCTTTATTTATCAATGAGGGAAAGCATGGTGGTGAGGCGACTGTGGAGGCTGTCCGGTTGATTGCTGATCATGTGAAATTTCATGACTGCCAATTGCATCCTGATTCCATCCAGCCTTTCATGCATCTAACATTTGACGAGGATTTGAGAAGAGCAGAAAAGCAAGATGAGCATAATAAAGTAAAGAACAAAAAACAATGGAAAAAAAAGAATCGTGAGGAAAAAAAGAATCGTGAGGAATCAAGTCATTCGCAAGGGAATGATGGAAGACAAAGTACGAGGACAAAGTTTACTGAAGAGGTTGCTGCGGATTACAGGGCTGCTTCTCTTGCTCCAGATGTGATGAAGCAAAGAGAGATGCAGTCAGATACACTTCGTGCTGTATTTGAAACATATTTCCGAATCTTAAGGCATACAATGCAGTCATTAAAGGCTAGGCCTGAAGCAAATATTACTGCATCTACTACTAGCCCATCTGGATCCCATCCTCTGCTTGCTCCATGTTTGAATGGGTTGGGGAAATTTTCTCATCTGATCGATTTAGATTTCATGGGAGATCTTATGAATTATCTAAAAAGGCTTGCTTCTGGTGATGATAAATCTTCTGAGAAACAGTCGCAATGTTTGACCGTTTCTGAGCGCCTTCAGTGTTGCATCGTGGCATTTAAAGTAATGAGGAAAAACCTTGATGCTTTGAATGTTGATCTTCAGGACTTTTTTGTTCAGCTGTACAATATTGTACTCGAGTACAGGCCTGGAAGAGATCATGGTGGATTGTTAGCTGAAGCTTTGAAGATAATGTTGTGCGATGATAGACAGCATGACATGCAAAAGGCAGCTGCATTCATTAAGCGTTTGGCTACTTTCTCATTATGCTTTGGATCTGCAGAGTCGATGGCAGCCTTGGTCACCGTAAGGCATCTTCTTCTGAAAAATGTCAAGTGCCGCAACCTTTTGGAAAACGATGCTGGGGGAGGTTCAGTGTCTGGTTCAATAGCGAAATATCAACCATATGCTTCTGACCCAACATTGAGTGGCGCTCTTGCTTCTGTCCTTTGGGAACTTAATCTTCTGTGGAAGCATTATCATCCAACTATCTCAACGATGGCAGCGAGCATATCAAGCATGAATAATGCTCAAAACCAAGTTTATATCTCCACTGTTGCTCCCCAACAGGCATTCAAAGACTTGTCGCTGGAACAAGAGTCTTTCAACCCACAGTTTAATGTACGAAAAGTTAACAAGAAAAAAAGAGGCAGGGAATCATCCGAGCCTACTCTCGATACTTGCAGCGCAATCGACGAAAATGAAGTGAAAGAGAAACTTTCAACAAGATTCTTTCTTCTCCGGGACATCAAGGAGAATGAAAGGTTGAGAGCTGAATTGGAGCGTACCACTTTGTCTTTGCAGCTATACGAAGAATACAAAAGGCAAAAGAGAAAAACCAAAAAGTCCAAGAATGTTTAA 5460 43.48 MENPFSSKEEGMMGYWGPSRTQAETMNSTDAGMRILSPEDVLPTFSDMMNFDSYAAIDQIFTSCGFSSMPQMSTCGSIEGLSFVEGGCHEGFPLNEHGGASISMANSFTCGDKAMFQLPDTEFGVSNVSDNANKVDSKSNDVPVDMDSCLISRPFGWSLDEKMLRVLSMFKESSPGGILAQVWVPVKHGDQFFLSTSEQPYLLDQMLTGYREVSRSFTFSAEGKLGSLLGLPGRVFTSKLPEWTSNVRYYSDHEYLRMQHAIGHDVYGSIALPVFNNEVEKSCCAVLEVVTTKEKPNFDAEIDIVSQALETVSLSTVPPPRLYSQCLKKNQRAALAEIVDVLRVVCHAHRLPLALTWIPCCYSFDAVDEVARVRVKENNINPEEKFVLCIEETACYVNDKSTQGFVHACLEHHLEEGQGIAGKALQSNHPFFYPDVKAYDINKYPLVHHARKFGLNAAVAIRLRSMYTGNDDYILEFFLPVNMKGAAEQQLLLNNLSVTMQRMCRSLRTVSKEELIGAEDSVVDFQSGLIGKSTTTSMRNSQSTVTDSETRVSNSINNGAEAECPEKQMTDGSWKQGEKKRSTSEKNVSLSVLQQYFSGSLKDAAKSIGELNAQNSLLFSDNNPAIPNLDLFLHDVNSVPSAPFNTQNSAIKLEMDESSVSISQRTSSRGVLIPEKEPNVRQHDCSEGLESAGVDAASCQLADLDMMSWDVQGNASVSIAAKKSDRLDFVKNDLRSGDADCQFMAKSSISFAAADEVGTVLNEHYQPTTSSMTDSSNGSGLMIHGSSSSSQSVERKHLPEKVGSVDSESKIIVKASYKDDTVRFKFDPCLGYLQLYEEVGMRFKLNQGTFQLKYLDDEKEWVMLVSNSDLQECLEVMDEIGTRNVRHPSYPLPATAFYPRHPESCRLFLPDAVSVAAAVCTFSLPAAFFLSLYFRNSVVQHFTRVRVNLSLLQGGFHFALDMGKKRNNEKQKVILPPDLPPEVTEEEIEVSDEDLEFVKENQDYAVSVTRLDTKSITKHVTRVANVEEDALEVLYEKRLRKKPLPKPEEENKTQVDRVDALPVKTLEGELYYRTCISYLSSLSHIMSSYICIFTLLLLAAKTSDAPEDGGNEEAMEEDRVDNGVLKLTKAERRAKLKKTKKVAKKQEDVTKAEEVKPTPQAAVLAEVVEDLTAEKTFESKKQKLAELGIALLADPNSNIKSLKDMLQIVKDNDQAIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEVKVSKDVKKMRYYEYTLLTTYKGYLQKLMSLEKSTAFQHIVIRCICTLLDAVPHFNFRETLLGIVVQNISSPDDVVRKLCSGAIKSLFINEGKHGGEATVEAVRLIADHVKFHDCQLHPDSIQPFMHLTFDEDLRRAEKQDEHNKVKNKKQWKKKNREEKKNREESSHSQGNDGRQSTRTKFTEEVAADYRAASLAPDVMKQREMQSDTLRAVFETYFRILRHTMQSLKARPEANITASTTSPSGSHPLLAPCLNGLGKFSHLIDLDFMGDLMNYLKRLASGDDKSSEKQSQCLTVSERLQCCIVAFKVMRKNLDALNVDLQDFFVQLYNIVLEYRPGRDHGGLLAEALKIMLCDDRQHDMQKAAAFIKRLATFSLCFGSAESMAALVTVRHLLLKNVKCRNLLENDAGGGSVSGSIAKYQPYASDPTLSGALASVLWELNLLWKHYHPTISTMAASISSMNNAQNQVYISTVAPQQAFKDLSLEQESFNPQFNVRKVNKKKRGRESSEPTLDTCSAIDENEVKEKLSTRFFLLRDIKENERLRAELERTTLSLQLYEEYKRQKRKTKKSKNV 1819
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 308576 325914 + Cp4.1LG08g06250.1 Cpe08g00047 473013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00047 1819 MobiDBLite consensus disorder prediction 768 794 - -
Cpe08g00047 1819 MobiDBLite consensus disorder prediction 1383 1426 - -
Cpe08g00047 1819 Pfam PB1 domain 813 883 IPR000270 GO:0005515
Cpe08g00047 1819 Pfam Nucleolar complex-associated protein 1180 1270 IPR011501 -
Cpe08g00047 1819 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 636 886 - -
Cpe08g00047 1819 Pfam CBF/Mak21 family 1546 1701 IPR005612 -
Cpe08g00047 1819 PANTHER PROTEIN NLP8 6 609 IPR045012 GO:0003700
Cpe08g00047 1819 Gene3D - 806 890 - -
Cpe08g00047 1819 SMART PB1_new 810 889 IPR000270 GO:0005515
Cpe08g00047 1819 Coils Coil 1786 1806 - -
Cpe08g00047 1819 SUPERFAMILY ARM repeat 1200 1584 IPR016024 -
Cpe08g00047 1819 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 6 609 - -
Cpe08g00047 1819 MobiDBLite consensus disorder prediction 534 561 - -
Cpe08g00047 1819 SUPERFAMILY CAD & PB1 domains 805 884 - -
Cpe08g00047 1819 MobiDBLite consensus disorder prediction 534 586 - -
Cpe08g00047 1819 PANTHER PROTEIN NLP8 636 886 IPR045012 GO:0003700
Cpe08g00047 1819 ProSiteProfiles PB1 domain profile. 810 889 IPR000270 GO:0005515
Cpe08g00047 1819 MobiDBLite consensus disorder prediction 768 793 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00047 Cpe-Chr8:308576 Cpe14g00447 Cpe-Chr14:2792768 6.95E-16 dispersed
Cpe04g00861 Cpe-Chr4:7921214 Cpe08g00047 Cpe-Chr8:308576 3.92E-09 transposed
Cpe15g00894 Cpe-Chr15:8607377 Cpe08g00047 Cpe-Chr8:308576 0 transposed
Cpe03g01194 Cpe-Chr3:9777035 Cpe08g00047 Cpe-Chr8:308576 6.70E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00047 K14834 - csv:101222520 1327.77