Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00059 ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTAAGTTCCCGGCAGAAGTGGTGGAGGTAGAAACAATGATGGAACAGAAAAGGAACCTATGCTCTGTTGATGAGAGCAGTCTCACTTCTCTTACATCCAAGCGACGCAAGGCAGATTTTTCCATCTCCGCTAAGGAAAAGAAAGACAAACTGGGCGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATTCGGAAAGACAGATACGGCATCTGTTCTTCTTGAGGCCATGGAATATATTCAATTCCTTCACGAGCAAGTCAAGGTATTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTCAGTTGCAGGAGATGGAGTTGCCATACAACCACGGCCTGAGGAACAAAGGTTTATGTCTTGTACCCATCTCTTGTACTGCAGGAGTTGCACGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAACCTCCCCCAAACTTGAGAAGATCATCTCACCATTCAATTGA 507 46.35 MIASSLCNASAKFPAEVVEVETMMEQKRNLCSVDESSLTSLTSKRRKADFSISAKEKKDKLGERIMALQQLVSPFGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVQLQEMELPYNHGLRNKGLCLVPISCTAGVARSNGADIWAPVKTTSPKLEKIISPFN 168
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 397738 401806 + Cp4.1LG08g06130.1 Cpe08g00059 473025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00059 168 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983
Cpe08g00059 168 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cpe08g00059 168 Gene3D - 41 117 IPR036638 GO:0046983
Cpe08g00059 168 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 109 IPR036638 GO:0046983
Cpe08g00059 168 SMART finulus 53 100 IPR011598 GO:0046983
Cpe08g00059 168 PANTHER TRANSCRIPTION FACTOR BHLH113-LIKE ISOFORM X1 17 152 - -
Cpe08g00059 168 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00059 Cpe-Chr8:397738 Cpe04g01116 Cpe-Chr4:9662278 1.67E-32 dispersed
Cpe03g01208 Cpe-Chr3:9873308 Cpe08g00059 Cpe-Chr8:397738 1.14E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00059 - - cmax:111470730 323.939