Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00067 ATGGAGAAAACCCCACCCCCAGAAAAGTCTGAAAGTTTTTCAAGAAATTTCAATAGAAGGATTGCGAATTTGGGCTCACCTCGCCGGACTACTGATGCCGCCGCTGATGCTAAATCGGAAGCTGAAAAGCATGCCGATCGTGAAGATGAAGCGTTCATTGAAGAGCCTCTTTCTGAATCAGAAACAGCTTTGATTTTCGAAGAGGTTGATCGATTCCTTGCGAATTCGTCCGATGCTAGAGATGACGGATCGAATCTCATGGTTGAAATTCCGAGCTCCGTTCTTTCCTTGTGCAAAATGGTGGACTCGATGACCTCCAGGTTCTATTCTACCAAAATTCCGGCGAAGCTCGGTAGCGATCCTGACCTAGATTCTTCGTTTTTCGAAGCTCTTAATCGCATTTCGAAGGTTGCGATTAAATTAAGCGAATTCCCTTCGACCACTGCCTCCATTCCTTCGCTCAATCGAACCACCACGTCTCTACAGCGAGCCATGTCGTTATTGGACGAAGAATTCAACGCGCTTCTGAAAGAATGCAAACATCGAGAGTCCGATTCGAAATTTGATAAGAAAGCGTTGAAGCAATCGTCCTTCAAATCAAGCAACGAATCAACAGATCAACATCACAGCGCCGTTCCTGAATCATCCGAGCCAGATTCTACCAAGGAGGAAGAATTTCCCTCTTTCTCGCTGGAAACTATATCGAAAATGAAAAGAATCGCCGAAACGATGATCTGCGCCGGCTACGAGAAGGAATGTTGTTTCAGCTACAGCTTACTCCGGCAGAGCTCGTTCAAAGGAATACTGAACAAGTACGGCTACGAAAATATTAGCATAGACGACATACAGAAAATGCAATGGGAGATTCTTCAATCGGAAATCGACAAATGGATGGCCGTCGTCAATAAATGCTCAAGTTCCTTGTTCCCAGGCGAGTGGAAGCTCTGCGACGCTGTTTTCGCCGATCATCCCTTCATTGCTCATACGCTCTTCAGCGGTTTAACAAGAGGAATAGTCATCAAGCTTCTCAACTTCGCAAATGCGGTGGTTCTAACAAAGCGATCGGCGGAGAAGATGTTCAAATTACTCGACATGTACGAGACCCTCCGCGATTTGATTCCGGCATTCAATGGCTTCCCTGAAAATTGCAGAACAGAGCTAATTTCAGAAGCGGAAGGGGCAAAACGCGGAATAGGCGAAGCAATAGTCGGGATTTTCTACGACCTAGAAAGCTCAATCAAAAGCGACAACGCGAAAATTCCTGTTCCAGGAGGAGCAGTTCATCCATTGACGCGCTACATAATGAATTACCTAAAATACGCCTGCGAGTACAAAGAAACCCTAGAACAGGTCCTTGAATTCCTCGACCCTAAAGCCGAAGAAAATCGACCGGCAATAATCGACGAAAACGACGATGAATCCCCGAGAAAGTCTCAGCTCGCGTATCAGGTGACGATGGTGATGGATCTGCTGGACGCGAACCTCGCGATGAGATCGAAGTTGTACCGCGACGCATCTCTTCGGTACATCTTCCTGATGAACAACGGAAGGTACATATTTCAGAAAATCAAAAGCTCAAGTGGAATAACGGAATTGATGGGAGACCGCTGGTGCCGGAAACGATCGACGAATCTGCGACGGTACCACAAAAATTACCAGCGAGAAACATGGAGTAAGGTGCTGCAATGCCTGAACCACGAAGGATTGCAGGTGAACGGGAAGGTATCGAAGCCCATATTGAAGGAGAGATTCAAAAGCTTCAACGCGATGTTCGACGAAATACACAAAACGCAGAGCAGTTGGGTGGTGAGCGACGACCAGCTTCAATCGGAGCTTCGGATTTCAGTGTCGGCGGTGATGATTCCGGCATACCGTTCGTTCGTGGGGAGATTCAAGCAGTATTTCGATCCGGGAAGACAATCGGAGAAGTACATAAAGTATCAGCCGGACGATATTGAAGGCTTGATCGAGGACCTGTTTGATGGCAATACTGCCTCTATGTCGAGAAGGAGAACGTAG 2019 46.95 MEKTPPPEKSESFSRNFNRRIANLGSPRRTTDAAADAKSEAEKHADREDEAFIEEPLSESETALIFEEVDRFLANSSDARDDGSNLMVEIPSSVLSLCKMVDSMTSRFYSTKIPAKLGSDPDLDSSFFEALNRISKVAIKLSEFPSTTASIPSLNRTTTSLQRAMSLLDEEFNALLKECKHRESDSKFDKKALKQSSFKSSNESTDQHHSAVPESSEPDSTKEEEFPSFSLETISKMKRIAETMICAGYEKECCFSYSLLRQSSFKGILNKYGYENISIDDIQKMQWEILQSEIDKWMAVVNKCSSSLFPGEWKLCDAVFADHPFIAHTLFSGLTRGIVIKLLNFANAVVLTKRSAEKMFKLLDMYETLRDLIPAFNGFPENCRTELISEAEGAKRGIGEAIVGIFYDLESSIKSDNAKIPVPGGAVHPLTRYIMNYLKYACEYKETLEQVLEFLDPKAEENRPAIIDENDDESPRKSQLAYQVTMVMDLLDANLAMRSKLYRDASLRYIFLMNNGRYIFQKIKSSSGITELMGDRWCRKRSTNLRRYHKNYQRETWSKVLQCLNHEGLQVNGKVSKPILKERFKSFNAMFDEIHKTQSSWVVSDDQLQSELRISVSAVMIPAYRSFVGRFKQYFDPGRQSEKYIKYQPDDIEGLIEDLFDGNTASMSRRRT 672
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 441455 443473 - Cp4.1LG08g06050.1 Cpe08g00067 473033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00067 672 MobiDBLite consensus disorder prediction 33 51 - -
Cpe08g00067 672 SUPERFAMILY Cullin repeat-like 125 661 IPR016159 -
Cpe08g00067 672 Pfam Exo70 exocyst complex subunit 296 658 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cpe08g00067 672 MobiDBLite consensus disorder prediction 1 15 - -
Cpe08g00067 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 57 671 IPR004140 GO:0000145|GO:0006887
Cpe08g00067 672 MobiDBLite consensus disorder prediction 210 226 - -
Cpe08g00067 672 MobiDBLite consensus disorder prediction 1 55 - -
Cpe08g00067 672 MobiDBLite consensus disorder prediction 197 227 - -
Cpe08g00067 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 57 671 - -
Cpe08g00067 672 Gene3D Exocyst complex component Exo70 110 670 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01977 Cpe-Chr1:16913665 Cpe08g00067 Cpe-Chr8:441455 0 dispersed
Cpe08g00067 Cpe-Chr8:441455 Cpe13g00544 Cpe-Chr13:5496933 0 dispersed
Cpe03g01216 Cpe-Chr3:9914479 Cpe08g00067 Cpe-Chr8:441455 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00067 K07195 - csv:101220402 1107.05