Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00085 ATGTTCTTGAAGAAGATGAGTGGTTGGAGAGGTGGATTGTTTGTGGAATTGGTTGTTTTTGCAGATATGTGTCTGATGGTGTCTGGTTTAGGCTCTATGGCTTCTGTGGCTGTTTCTTATGGCGAGAAAGGGCCTGTTTTCTGTGGTTTAATGGCAGATGGGTCTCATCTTGTGAGCTGTTTTGGTTCAAATTCAGCCATAACTTACGGAACTCCTTCTCATTTCCCCTTCATTGGTCTCACTGCTGGTGATGGTTTTGTTTGTGGGCTTCTTTTGGATTCCAATCAGCCTTACTGTTGGGGAAGCAGTGGCTATGTTCAAATGGGTGTTCCTCAGCCCATGATCAAAGCCGCTCAATACCAGGAAATCAGTGCTGGTGATTACCATCTCTGTGGCCTCCGAACACCGCTAACTGGAAGGCATAGGAACAACACGTCTTTTGTTGATTGTTGGGGTTACAACATGACAAGAACCTTTGTGTTTGATGGCCCGATTGAATCGATCTCGGCAGGGTCTGAGTTCAACTGTGGGCTGTTTTCTCTTAATAGAACTGTTTTGTGTTGGGGCGATGAGACGAGCAGCCGGGTCATCAGTTTGATACCTAAAGATATGAGGTTTCTAAAGATTGCTTCTGGTGGATATCATGTTTGTGGGATTCTAGAGGGCGCTAAGGCGAGGGCGTTCTGTTGGGGAAGGAGCTTAGACATTGAAGGAAGTGCAGACTTGGTTCCAGTTGATCCATTAGACTCTGTTGTTGGGGGCAAGTTTCATGCTTGTGGGATCAAGAGCATGGACCGTGGTGTGATTTGTTGGGGCTTTACAGTCAAACCAAGCACTCCAGCGCCGGATGGGATTAAGGTTTATGACATAGCAGCTGGAGATTACTTCACTTGTGGAATTCTAGCTGAGAAATCTCTCCTGCCTGTTTGCTGGGGTCTTGGATTTCCTAGTTCTATGCCCTTAGCTGTGTCGCCAGGAGTCTGTAAAGCAACTCCTTGTGCTCCTGGTTTCTATGAACTAAGCCAAGACAGTGCTCGGTGCAAGTCGCCGAGTTTTCGTGTGTGTATGCCCTGCAGTACTACATGCCCTCCTGAGATGTACCAAAAATTTGAATGCTCCTTAAAATCTGATAGACAATGTGAATATAACTGTTCAAGTTGTTTTTCTTCGGAGTGTTCATCAAACTGTTCATCCATTAGTTCAAATGGCTTGATGGGGAAGAAAAATGAGAAGTTGTGGTCAATGCAGCTTCCAGCTCTGGTAGCAGAGGTTGCTTTTGCTCTGTTTTTGGTAGCTATTGTGTCGTTAACTGCGATCTTATACGTTCGGTATAAGTTACGGAGCTTCCATTGTTCCGAAAGGGAGTTAAAGTCTAAGAAGAACCAAGGGACTGCCTCTTCCTTCCAGAAGGAAAGCTACAAAATACGTCCTGACTTGGATGAGCTAAAGATAATGAGGGCTCGGATGTTCACTTACGAAGAACTCGTGGGAGCGACGTGCGGGTTTAAGGAAGATTCAATGGTGGGAAAGGGAAGTTTCTCCTGTGTTTTCCGAGTTTTAGATCCGATACTAAAACCGCCATCCGATATCGAGGCCTTGAAGAGGATAGCAAACGTAGCTTGTACATGTGTGAGAATGAGGGCGAAGGAGAGGCCATCAATGGACAAAGTCACGACGGCATTGGAACGTGCTCTTGCCCAGTTAATGGGAAGTCCATATAATGAACAACCTATCTTACCAACGGAGGTGGTTTTAGGAAGCAGTAGACTGCATAAAAAGTCATCTCAAAGATCATTGAACCATTCCGTCTCCGAAACGGATATAGCAGAATCTGAGGATCAAAGGTTCGAGTTCAGAGCTCCGTCGTGGATTACATTCCCGAGCGTGACATCGTCCCAGCGGAGGAAATCCTCAGCTTCAGAAGCAGATGTTGATGGAAAGAATTTAGAAGGAAGAAATGGGGATGGATTGAAGAGTTTAGAGGAAGAGATTGAGCCTGCTTCCCCTCAGGAAAAGCTGTTCTTGGAGCACAATTTCTAA 2040 45.69 MFLKKMSGWRGGLFVELVVFADMCLMVSGLGSMASVAVSYGEKGPVFCGLMADGSHLVSCFGSNSAITYGTPSHFPFIGLTAGDGFVCGLLLDSNQPYCWGSSGYVQMGVPQPMIKAAQYQEISAGDYHLCGLRTPLTGRHRNNTSFVDCWGYNMTRTFVFDGPIESISAGSEFNCGLFSLNRTVLCWGDETSSRVISLIPKDMRFLKIASGGYHVCGILEGAKARAFCWGRSLDIEGSADLVPVDPLDSVVGGKFHACGIKSMDRGVICWGFTVKPSTPAPDGIKVYDIAAGDYFTCGILAEKSLLPVCWGLGFPSSMPLAVSPGVCKATPCAPGFYELSQDSARCKSPSFRVCMPCSTTCPPEMYQKFECSLKSDRQCEYNCSSCFSSECSSNCSSISSNGLMGKKNEKLWSMQLPALVAEVAFALFLVAIVSLTAILYVRYKLRSFHCSERELKSKKNQGTASSFQKESYKIRPDLDELKIMRARMFTYEELVGATCGFKEDSMVGKGSFSCVFRVLDPILKPPSDIEALKRIANVACTCVRMRAKERPSMDKVTTALERALAQLMGSPYNEQPILPTEVVLGSSRLHKKSSQRSLNHSVSETDIAESEDQRFEFRAPSWITFPSVTSSQRRKSSASEADVDGKNLEGRNGDGLKSLEEEIEPASPQEKLFLEHNF 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 535279 537960 - Cp4.1LG08g05850.1 Cpe08g00085 473051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00085 679 Gene3D - 25 159 IPR009091 -
Cpe08g00085 679 Gene3D - 160 315 IPR009091 -
Cpe08g00085 679 MobiDBLite consensus disorder prediction 638 679 - -
Cpe08g00085 679 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 332 380 IPR001368 GO:0005515
Cpe08g00085 679 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 519 679 - -
Cpe08g00085 679 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 13 518 - -
Cpe08g00085 679 MobiDBLite consensus disorder prediction 629 679 - -
Cpe08g00085 679 SUPERFAMILY RCC1/BLIP-II 31 273 IPR009091 -
Cpe08g00085 679 PANTHER RECEPTOR-LIKE KINASE 519 679 - -
Cpe08g00085 679 PANTHER RECEPTOR-LIKE KINASE 13 518 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01243 Cpe08g00085 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00085 Cpe-Chr8:535279 Cpe10g00211 Cpe-Chr10:1208138 4.61E-41 dispersed
Cpe03g01243 Cpe-Chr3:10075627 Cpe08g00085 Cpe-Chr8:535279 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00085 - - csv:101210393 907.131