Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00104 ATGGCGCCGAGCGATTTGAAGAATCTGGATCCATTTCTGATGCTCGATGATTTTTCCGTTAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACTTACATGTTACAGGGAGGAATTACCCATCAGGATTTTGCTGGCCACAAGGGCACGATCAGAACAGGGGATGTACAGTGGATGACAGCAGGAAGAGGTATTATCCATTCTGAAATGCCTGCTGGCGAAGGTCCTCAAAAGGGATTGCAACTTTGGATCAATCTTGCAGCACATGACAAAATGATGGAACCAAAATATCAGGAGATTCTAAGCGAGGACATTCCGAGAGCGGAGAACGACGGTGTCGAAGTTAACGTTATAGCAGGAGAGTCCATGGGAGTCCATTCTCCAATCTACACTCAAACGCCAACGATGTACCTCGACTTCACATTGAAACCAAAAGCTCAAGTGCATCAAAGCATCCCAGACACATGGACTTCTTTCGTATACATAATCGACGGGGAAGGGGTATTCGGGTCGTTGAACTCGTCCCGGGTAGCTGCTCACCATGTCCTAGTGTTGGGACCGGGAGATGGGCTTAGTGTATGGAACAAATCTTCAAATCCATTGAGGTTTATTCTTGTAGCAGGGAAGCCACTGAATGAACCAATTGTTCAACATGGACCATTTGTGATGAACTCCCAATCTGAAATTGACCAAGCCATTGAGGACTACCACTATGCCAAAAATGGGTTTGAAATGGCAAAGCATTGGAGATCACAGTGA 777 46.72 MAPSDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGPQKGLQLWINLAAHDKMMEPKYQEILSEDIPRAENDGVEVNVIAGESMGVHSPIYTQTPTMYLDFTLKPKAQVHQSIPDTWTSFVYIIDGEGVFGSLNSSRVAAHHVLVLGPGDGLSVWNKSSNPLRFILVAGKPLNEPIVQHGPFVMNSQSEIDQAIEDYHYAKNGFEMAKHWRSQ 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 664627 666438 + Cp4.1LG08g05760.1 Cpe08g00104 473070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00104 258 Gene3D Jelly Rolls 4 243 IPR014710 -
Cpe08g00104 258 Pfam Pirin 5 90 IPR003829 -
Cpe08g00104 258 CDD cupin_pirin_N 3 92 - -
Cpe08g00104 258 PANTHER PIRIN-LIKE PROTEIN 4 258 - -
Cpe08g00104 258 CDD cupin_pirin_C 140 216 - -
Cpe08g00104 258 SUPERFAMILY RmlC-like cupins 5 256 IPR011051 -
Cpe08g00104 258 PIRSF Pirin 1 256 IPR012093 -
Cpe08g00104 258 Gene3D Jelly Rolls 112 217 IPR014710 -
Cpe08g00104 258 Pfam Pirin C-terminal cupin domain 143 247 IPR008778 -
Cpe08g00104 258 PANTHER PIRIN-RELATED 4 258 IPR012093 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00104 Cpe-Chr8:664627 Cpe14g00761 Cpe-Chr14:5978983 6.81E-97 dispersed
Cpe03g01269 Cpe-Chr3:10287007 Cpe08g00104 Cpe-Chr8:664627 1.74E-172 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00104 K06911 - csv:101205861 494.967