Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00110 TTCATGGAGAAGGACAAACCCCAAAGCCATTCTGCTGGATTTCTTCCCCCATCGAGTCGCTACTCGAGTCTTTCACCAACTGCAAGTAGTTTCAATGGAAAATCCGAGACTGCTTCGTGTTCAATGTCGCTTCCTCCAATGGCTCCGAGTCCTAATTCTTCCGATTCGGGTCAATTTGGTCGTGGAATGTCCAGTGATTCCAATCGTTTCAGCCATGATATTAGTCGGATGCCTGATAACCCGCCGAGAAATATGGGTCATCGACGTGCCCATTCCGAGATTCTGACTCTTCCTGATGATATTTGTTTTGACAGTGATCTTGGTGTCATTGGTGGTGCTGATGGGCCTTCCTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGATAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGGGAGTCATCTTCCGCTGCTGTAGAAGCAAGATCAACTCCTACTTCAGGAATTGGAGCTGCAACTTCTAAGGATGATGCTGCTTCAGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACCTCATTATCTGCTCAATTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTTAAGCTGAGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGCTCTAAATGAAGCATTGAAAGAGGAAATTCAACATTTGAAAATATTGACTGGCCAAGCAATCCCAAATGACATGTTGTAG 804 45.15 FMEKDKPQSHSAGFLPPSSRYSSLSPTASSFNGKSETASCSMSLPPMAPSPNSSDSGQFGRGMSSDSNRFSHDISRMPDNPPRNMGHRRAHSEILTLPDDICFDSDLGVIGGADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAMQVGESSSAAVEARSTPTSGIGAATSKDDAASAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDALNEALKEEIQHLKILTGQAIPNDML 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 710408 714062 + Cp4.1LG08g05820.1 Cpe08g00110 473076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00110 267 Coils Coil 181 250 - -
Cpe08g00110 267 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 175 264 - -
Cpe08g00110 267 MobiDBLite consensus disorder prediction 152 178 - -
Cpe08g00110 267 SMART brlzneu 167 225 IPR004827 GO:0003700|GO:0006355
Cpe08g00110 267 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 173 - -
Cpe08g00110 267 MobiDBLite consensus disorder prediction 1 87 - -
Cpe08g00110 267 SUPERFAMILY Leucine zipper domain 175 219 IPR046347 GO:0003700|GO:0006355
Cpe08g00110 267 CDD bZIP_plant_RF2 176 215 IPR044759 GO:0003700|GO:0006355
Cpe08g00110 267 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 175 264 - -
Cpe08g00110 267 MobiDBLite consensus disorder prediction 152 169 - -
Cpe08g00110 267 MobiDBLite consensus disorder prediction 12 71 - -
Cpe08g00110 267 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 9 173 - -
Cpe08g00110 267 Gene3D - 173 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00110 Cpe-Chr8:710408 Cpe02g01122 Cpe-Chr2:10238148 1.23E-41 dispersed
Cpe08g00110 Cpe-Chr8:710408 Cpe08g00112 Cpe-Chr8:722843 1.71E-35 proximal
Cpe03g01277 Cpe-Chr3:10340875 Cpe08g00110 Cpe-Chr8:710408 1.80E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00110 - - cmax:111470876 356.295