Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00112 | ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTATCCCCATCAAGTCGTTACCCAGGTCTTTCTCCAACTGGAAGCAGTTTCAATGGAAAATCTGAAGCAACCTCGTCTTCAATGACGCTTCCTCCAATGGCTTCGGGTGCTAATTCTGATTCAATTCAATTCAGTCACGGAATGTCCACTAATTCTAATCGGTTCAGCCATGATATTTGTCGGATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGACGATATATGTTTCAACAGTGACCTAGGTGTCATTGGCAGTGCTGATGGGCCTTCCTTTTCTGATGACACTGAGGAAGATTTGCTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGCGAGTCATCTGCTGCTGTTGTAGATGCAAGATCAACTCCTTCATCAGAAATTGGAGCAGCAACATCTAAAGACGATGCTGTTGTTGGCTTGAAGGAGAGGCCAAGAGTAAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAAGCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGTCTCTGCTGCTGACTCCAAGAAATCCGCGTCAGCTACAAAGCTTGCTGAGCTTGCACTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCGAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGGAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTACGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGATATGGCGTGTCTTGTTGA | 942 | 46.07 | MEKDKPQSHSGGFLSPSSRYPGLSPTGSSFNGKSEATSSSMTLPPMASGANSDSIQFSHGMSTNSNRFSHDICRMPDNPPRNIGHRRAHSEILTLPDDICFNSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAMQVGESSAAVVDARSTPSSEIGAATSKDDAVVGLKERPRVRHQHSQSMDGLSSIKPEMLVSGSEEVSAADSKKSASATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVLTLQTEGTSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDGYGVSC | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 722843 | 726626 | + | Cp4.1LG08g05640.1 | Cpe08g00112 | 473078 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00112 | 313 | Pfam | bZIP transcription factor | 231 | 279 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00112 | 313 | SMART | brlzneu | 227 | 291 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00112 | 313 | Gene3D | - | 230 | 306 | - | - | |
Cpe08g00112 | 313 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 7 | 308 | - | - | |
Cpe08g00112 | 313 | SUPERFAMILY | Leucine zipper domain | 231 | 282 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe08g00112 | 313 | MobiDBLite | consensus disorder prediction | 10 | 61 | - | - | |
Cpe08g00112 | 313 | Coils | Coil | 282 | 302 | - | - | |
Cpe08g00112 | 313 | CDD | bZIP_plant_RF2 | 232 | 281 | IPR044759 | GO:0003700|GO:0006355 | |
Cpe08g00112 | 313 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 7 | 308 | - | - | |
Cpe08g00112 | 313 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Cpe08g00112 | 313 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 229 | 292 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g01277 | Cpe-Chr3:10340875 | Cpe08g00112 | Cpe-Chr8:722843 | 6.05E-174 | dispersed | |
Cpe08g00112 | Cpe-Chr8:722843 | Cpe05g01003 | Cpe-Chr5:6554341 | 1.34E-45 | dispersed | |
Cpe08g00110 | Cpe-Chr8:710408 | Cpe08g00112 | Cpe-Chr8:722843 | 1.71E-35 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49818 | PF00170 | bZIP_1 | 2.60E-08 | CL0018 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00112 | - | - | csv:101210291 | 510.375 |