Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00112 ATGGAGAAGGACAAACCCCAGAGCCATTCTGGTGGATTTCTATCCCCATCAAGTCGTTACCCAGGTCTTTCTCCAACTGGAAGCAGTTTCAATGGAAAATCTGAAGCAACCTCGTCTTCAATGACGCTTCCTCCAATGGCTTCGGGTGCTAATTCTGATTCAATTCAATTCAGTCACGGAATGTCCACTAATTCTAATCGGTTCAGCCATGATATTTGTCGGATGCCTGATAACCCACCAAGAAATATTGGTCACAGACGTGCTCATTCAGAAATACTGACCCTTCCTGACGATATATGTTTCAACAGTGACCTAGGTGTCATTGGCAGTGCTGATGGGCCTTCCTTTTCTGATGACACTGAGGAAGATTTGCTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCCTCTGCTACCTCTGCAATGCAAGTTGGCGAGTCATCTGCTGCTGTTGTAGATGCAAGATCAACTCCTTCATCAGAAATTGGAGCAGCAACATCTAAAGACGATGCTGTTGTTGGCTTGAAGGAGAGGCCAAGAGTAAGACACCAGCATAGCCAGTCCATGGATGGCTTGTCAAGCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGTCTCTGCTGCTGACTCCAAGAAATCCGCGTCAGCTACAAAGCTTGCTGAGCTTGCACTAATTGACCCCAAACGTGCAAAGAGGATATGGGCAAATAGACAGTCAGCTGCGAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCTGACTCTGCAAACAGAGGGAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTACTGCTGAGAACAGTGAACTAAAGCTACGGTTGCAGACAATGGAGCAGCAGGTTCACCTACAAGATGGATATGGCGTGTCTTGTTGA 942 46.07 MEKDKPQSHSGGFLSPSSRYPGLSPTGSSFNGKSEATSSSMTLPPMASGANSDSIQFSHGMSTNSNRFSHDICRMPDNPPRNIGHRRAHSEILTLPDDICFNSDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSSATSAMQVGESSAAVVDARSTPSSEIGAATSKDDAVVGLKERPRVRHQHSQSMDGLSSIKPEMLVSGSEEVSAADSKKSASATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVLTLQTEGTSLSAQLTLLQRDTNGLTAENSELKLRLQTMEQQVHLQDGYGVSC 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 722843 726626 + Cp4.1LG08g05640.1 Cpe08g00112 473078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00112 313 Pfam bZIP transcription factor 231 279 IPR004827 GO:0003700|GO:0006355
Cpe08g00112 313 SMART brlzneu 227 291 IPR004827 GO:0003700|GO:0006355
Cpe08g00112 313 Gene3D - 230 306 - -
Cpe08g00112 313 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 308 - -
Cpe08g00112 313 SUPERFAMILY Leucine zipper domain 231 282 IPR046347 GO:0003700|GO:0006355
Cpe08g00112 313 MobiDBLite consensus disorder prediction 10 61 - -
Cpe08g00112 313 Coils Coil 282 302 - -
Cpe08g00112 313 CDD bZIP_plant_RF2 232 281 IPR044759 GO:0003700|GO:0006355
Cpe08g00112 313 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 308 - -
Cpe08g00112 313 MobiDBLite consensus disorder prediction 1 61 - -
Cpe08g00112 313 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 292 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01277 Cpe-Chr3:10340875 Cpe08g00112 Cpe-Chr8:722843 6.05E-174 dispersed
Cpe08g00112 Cpe-Chr8:722843 Cpe05g01003 Cpe-Chr5:6554341 1.34E-45 dispersed
Cpe08g00110 Cpe-Chr8:710408 Cpe08g00112 Cpe-Chr8:722843 1.71E-35 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49818 PF00170 bZIP_1 2.60E-08 CL0018 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00112 - - csv:101210291 510.375