Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00128 ATGAGAGTTGGGAAGTATGAGTTGGGGAAAACTCTGGGGGAAGGCAATTTCGGCAAGGTAAAGTTGGCCGTCGATCTCCGTTCCGGCCGCCGTTATGCTGTCAAGATCCTTGACAAGACCAAGATTCTTCATCTCAACTTCTCTGATCAGATTAAGCGTGAAATAAGTACTCTCAAGCTTCTTAGACATCCGAATGTTGTTAGACTCTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTATGGAGTGCGTCACTGGTGGGGAATTGTTTGATAGAATCGAAGATGGTTTGCTGCACACCACTTGTGGAAGTCCCAACTATGTTGCACCAGAAGTACTTGCTAATAGAGGATACAATGGAGCTGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTGATTCTTACAGCTTGTCTTCCTTTTGACGAGACGAATCTGGCTCTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGCTACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATAAAGAGAACTCTTGACCCCAATCCCAATACTCGGATTACAATGGCAGGAATTAAAAAGGATGAATGGTTCAAGATTGACTATAATCCTGCTTCTCCTTGTTATGATGATGATGATGAGGATGAGGAGATTCCATTCACTGATCAGGACGATGCCATCTCGACGCACGATGAGGCATTTGACGGTGAAAACAGCCCAGAATCTCCCTCTATTATCAACGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGACCTGTCCGGCTTCTTTGAGCAAGAGGATGTTTCTGAGAGGAAGACCAGATTTACATCCAACCATTCTGCCAAGGACTTGCTCGAGAGGATCGAGATTATAGCAACGGATATGGGATTCCGGGTCCAAAAGAAAAGTGGAAAGTTGAAAGTAATGCAAGAGATAAGAAATCAAAGAAGCCTAAGCAATCTCTCATTCAAAGCAGAGGTCTTTGAGATTAGCCCATTGCTTAACGTAGTGGAACTGAAGAAATCTTTTGGAGATTCCTCAGCTTACAGACAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCCGAGCTCGAACGGCATAATTCGAGTTCATTCACGTTAAATAGTGCATGTTAG 1146 43.02 MRVGKYELGKTLGEGNFGKVKLAVDLRSGRRYAVKILDKTKILHLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVMECVTGGELFDRIEDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLALLYKKTLRGDFQLPKWLSAGARNLIKRTLDPNPNTRITMAGIKKDEWFKIDYNPASPCYDDDDEDEEIPFTDQDDAISTHDEAFDGENSPESPSIINAFELIGMSSSLDLSGFFEQEDVSERKTRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEIRNQRSLSNLSFKAEVFEISPLLNVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSSSFTLNSAC 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 840252 843666 - Cp4.1LG08g05460.1 Cpe08g00128 473094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00128 381 PANTHER - 96 367 - -
Cpe08g00128 381 MobiDBLite consensus disorder prediction 361 381 - -
Cpe08g00128 381 Pfam Protein kinase domain 6 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00128 381 Pfam Protein kinase domain 100 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00128 381 ProSiteProfiles NAF domain profile. 241 265 IPR018451 GO:0007165
Cpe08g00128 381 PANTHER - 1 95 - -
Cpe08g00128 381 CDD CIPK_C 247 358 - -
Cpe08g00128 381 Gene3D Kinase associated domain 1, KA1 245 363 - -
Cpe08g00128 381 PANTHER CBL-INTERACTING PROTEIN KINASE 21 96 367 - -
Cpe08g00128 381 PANTHER CBL-INTERACTING PROTEIN KINASE 21 1 95 - -
Cpe08g00128 381 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
Cpe08g00128 381 Gene3D Phosphorylase Kinase; domain 1 1 95 - -
Cpe08g00128 381 Gene3D Transferase(Phosphotransferase) domain 1 96 244 - -
Cpe08g00128 381 Pfam NAF domain 243 302 IPR004041 GO:0007165
Cpe08g00128 381 SUPERFAMILY Protein kinase-like (PK-like) 3 207 IPR011009 -
Cpe08g00128 381 ProSiteProfiles Protein kinase domain profile. 6 198 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01300 Cpe08g00128 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00128 Cpe-Chr8:840252 Cpe09g00800 Cpe-Chr9:7438499 9.31E-81 dispersed
Cpe12g00350 Cpe-Chr12:2366003 Cpe08g00128 Cpe-Chr8:840252 3.06E-109 wgd
Cpe03g01300 Cpe-Chr3:10556643 Cpe08g00128 Cpe-Chr8:840252 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62538 PF00069 Pkinase 2.80E-18 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00128 K07198 - csv:101205987 507.679