Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00128 | ATGAGAGTTGGGAAGTATGAGTTGGGGAAAACTCTGGGGGAAGGCAATTTCGGCAAGGTAAAGTTGGCCGTCGATCTCCGTTCCGGCCGCCGTTATGCTGTCAAGATCCTTGACAAGACCAAGATTCTTCATCTCAACTTCTCTGATCAGATTAAGCGTGAAATAAGTACTCTCAAGCTTCTTAGACATCCGAATGTTGTTAGACTCTATGAGGTTTTAGCTAGTAAGACGAAGATTTATATGGTTATGGAGTGCGTCACTGGTGGGGAATTGTTTGATAGAATCGAAGATGGTTTGCTGCACACCACTTGTGGAAGTCCCAACTATGTTGCACCAGAAGTACTTGCTAATAGAGGATACAATGGAGCTGCCTCTGATATATGGTCATGTGGGGTTATCTTGTATGTGATTCTTACAGCTTGTCTTCCTTTTGACGAGACGAATCTGGCTCTACTTTATAAAAAGACTTTGAGGGGGGATTTTCAGCTACCCAAATGGTTATCAGCAGGTGCCAGAAATTTGATAAAGAGAACTCTTGACCCCAATCCCAATACTCGGATTACAATGGCAGGAATTAAAAAGGATGAATGGTTCAAGATTGACTATAATCCTGCTTCTCCTTGTTATGATGATGATGATGAGGATGAGGAGATTCCATTCACTGATCAGGACGATGCCATCTCGACGCACGATGAGGCATTTGACGGTGAAAACAGCCCAGAATCTCCCTCTATTATCAACGCGTTTGAGTTAATTGGGATGTCTTCAAGTCTGGACCTGTCCGGCTTCTTTGAGCAAGAGGATGTTTCTGAGAGGAAGACCAGATTTACATCCAACCATTCTGCCAAGGACTTGCTCGAGAGGATCGAGATTATAGCAACGGATATGGGATTCCGGGTCCAAAAGAAAAGTGGAAAGTTGAAAGTAATGCAAGAGATAAGAAATCAAAGAAGCCTAAGCAATCTCTCATTCAAAGCAGAGGTCTTTGAGATTAGCCCATTGCTTAACGTAGTGGAACTGAAGAAATCTTTTGGAGATTCCTCAGCTTACAGACAGTTGTGTGAAAGGCTATCAAATGATTTGGGCACAAACCCCGAGCTCGAACGGCATAATTCGAGTTCATTCACGTTAAATAGTGCATGTTAG | 1146 | 43.02 | MRVGKYELGKTLGEGNFGKVKLAVDLRSGRRYAVKILDKTKILHLNFSDQIKREISTLKLLRHPNVVRLYEVLASKTKIYMVMECVTGGELFDRIEDGLLHTTCGSPNYVAPEVLANRGYNGAASDIWSCGVILYVILTACLPFDETNLALLYKKTLRGDFQLPKWLSAGARNLIKRTLDPNPNTRITMAGIKKDEWFKIDYNPASPCYDDDDEDEEIPFTDQDDAISTHDEAFDGENSPESPSIINAFELIGMSSSLDLSGFFEQEDVSERKTRFTSNHSAKDLLERIEIIATDMGFRVQKKSGKLKVMQEIRNQRSLSNLSFKAEVFEISPLLNVVELKKSFGDSSAYRQLCERLSNDLGTNPELERHNSSSFTLNSAC | 381 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 840252 | 843666 | - | Cp4.1LG08g05460.1 | Cpe08g00128 | 473094 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00128 | 381 | PANTHER | - | 96 | 367 | - | - | |
Cpe08g00128 | 381 | MobiDBLite | consensus disorder prediction | 361 | 381 | - | - | |
Cpe08g00128 | 381 | Pfam | Protein kinase domain | 6 | 96 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe08g00128 | 381 | Pfam | Protein kinase domain | 100 | 198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe08g00128 | 381 | ProSiteProfiles | NAF domain profile. | 241 | 265 | IPR018451 | GO:0007165 | |
Cpe08g00128 | 381 | PANTHER | - | 1 | 95 | - | - | |
Cpe08g00128 | 381 | CDD | CIPK_C | 247 | 358 | - | - | |
Cpe08g00128 | 381 | Gene3D | Kinase associated domain 1, KA1 | 245 | 363 | - | - | |
Cpe08g00128 | 381 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 96 | 367 | - | - | |
Cpe08g00128 | 381 | PANTHER | CBL-INTERACTING PROTEIN KINASE 21 | 1 | 95 | - | - | |
Cpe08g00128 | 381 | ProSitePatterns | Protein kinases ATP-binding region signature. | 12 | 35 | IPR017441 | GO:0005524 | |
Cpe08g00128 | 381 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 95 | - | - | |
Cpe08g00128 | 381 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 244 | - | - | |
Cpe08g00128 | 381 | Pfam | NAF domain | 243 | 302 | IPR004041 | GO:0007165 | |
Cpe08g00128 | 381 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 207 | IPR011009 | - | |
Cpe08g00128 | 381 | ProSiteProfiles | Protein kinase domain profile. | 6 | 198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01300 | Cpe08g00128 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00128 | Cpe-Chr8:840252 | Cpe09g00800 | Cpe-Chr9:7438499 | 9.31E-81 | dispersed | |
Cpe12g00350 | Cpe-Chr12:2366003 | Cpe08g00128 | Cpe-Chr8:840252 | 3.06E-109 | wgd | |
Cpe03g01300 | Cpe-Chr3:10556643 | Cpe08g00128 | Cpe-Chr8:840252 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62538 | PF00069 | Pkinase | 2.80E-18 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00128 | K07198 | - | csv:101205987 | 507.679 |