Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00144 ATGGAGAAAAAATTTGAAGACTCGTTGATGGGGTCGGCTACTTCCACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTGTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACTGCTCCCCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCGACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTTCTCCTATTGAAGAGGTCGACAAGAACAAGACTTCCAAAATGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACGGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTATCGATGGAGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGAAGTTATTATCGTTGCACGACGTCACAATGCGGTGTGAAGAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGAATCCTATCGGAATCAACCAATTGCCTCGTTGCCGATCACGACGTTGCCACCACCGGAATTCTGTTCCAACACAACGTTCCCGGCCAACCCTTCATGTATAACCCTCTGCAACCGTTTCTAACAAATGATTCATCGTTCTTGAGTCCTCGTCCTCCTCCATCTTCCGTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAAGACAATGGACTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGA 972 48.05 MEKKFEDSLMGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCCSSSSFDLFGGGIGFHDFYNPSSMFDLLSTTAPPLQPPLSSPSSTVPESSEVLNAPTTPNSSSVSNSSSNEASPIEEVDKNKTSKMLKPKKNQKKQRERRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILFQHNVPGQPFMYNPLQPFLTNDSSFLSPRPPPSSVPPPSLSSRASLLQDNGLLQDLVPLQVRKEPKDEQNG 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 939405 941099 - Cp4.1LG08g05270.1 Cpe08g00144 473110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00144 323 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 87 309 - -
Cpe08g00144 323 MobiDBLite consensus disorder prediction 274 299 - -
Cpe08g00144 323 MobiDBLite consensus disorder prediction 86 151 - -
Cpe08g00144 323 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00144 323 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00144 323 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 309 IPR044810 GO:0003700
Cpe08g00144 323 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe08g00144 323 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe08g00144 323 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00144 323 MobiDBLite consensus disorder prediction 93 125 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00144 Cpe12g00331 CCT
Cpe08g00144 Cpe12g00331 ECH
Cpe03g01319 Cpe08g00144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00144 Cpe-Chr8:939405 Cpe15g00881 Cpe-Chr15:8508582 1.61E-43 dispersed
Cpe12g00331 Cpe-Chr12:2190645 Cpe08g00144 Cpe-Chr8:939405 3.63E-60 wgd
Cpe03g01319 Cpe-Chr3:10730902 Cpe08g00144 Cpe-Chr8:939405 1.30E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49822 PF03106 WRKY 1.80E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00144 - - bhj:120088001 356.681