Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00144 | ATGGAGAAAAAATTTGAAGACTCGTTGATGGGGTCGGCTACTTCCACCGGAATTTACTCTCAAACGGTGTTTTCCGACGAGTTTCCGGTGGGTGGTTCGGGTTTTTCCGGTGTGTTCGACCTGCCATGTGATGATGATCATAAAGCTTCTTGTTGTTCTTCTTCTTCTTTTGACTTGTTTGGTGGTGGGATTGGATTCCATGATTTCTATAATCCTTCTTCTATGTTCGATTTGCTTTCTACTACTGCTCCCCCCCTTCAGCCGCCGCTTTCCTCGCCGTCCTCCACCGTCCCGGAGTCCTCCGAGGTGCTTAATGCTCCGACGACGCCTAATTCTTCCTCCGTTTCTAATTCCTCCTCCAATGAAGCTTCTCCTATTGAAGAGGTCGACAAGAACAAGACTTCCAAAATGTTGAAGCCAAAGAAGAACCAGAAGAAGCAAAGAGAACGGAGATTTGCTTTCATGACAAAGAGTGATATCGATCATCTCGACGACGGTTATCGATGGAGGAAGTACGGTCAAAAGGCCGTGAAGAACAGTCCTTATCCTAGAAGTTATTATCGTTGCACGACGTCACAATGCGGTGTGAAGAAGAGGGTGGAACGGTCATCGAGCGACCATTCAATCGTCATCACAACGTACGAAGGCCAACACACCCACCAAAGTCCGGTAATGCCACGAGGAAGCATTCGAATCCTATCGGAATCAACCAATTGCCTCGTTGCCGATCACGACGTTGCCACCACCGGAATTCTGTTCCAACACAACGTTCCCGGCCAACCCTTCATGTATAACCCTCTGCAACCGTTTCTAACAAATGATTCATCGTTCTTGAGTCCTCGTCCTCCTCCATCTTCCGTTCCACCGCCATCGTTGTCGTCTCGAGCTTCCTTGCTTCAAGACAATGGACTTCTGCAGGACTTGGTGCCATTGCAAGTGAGGAAGGAACCAAAAGATGAACAAAATGGATGA | 972 | 48.05 | MEKKFEDSLMGSATSTGIYSQTVFSDEFPVGGSGFSGVFDLPCDDDHKASCCSSSSFDLFGGGIGFHDFYNPSSMFDLLSTTAPPLQPPLSSPSSTVPESSEVLNAPTTPNSSSVSNSSSNEASPIEEVDKNKTSKMLKPKKNQKKQRERRFAFMTKSDIDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTSQCGVKKRVERSSSDHSIVITTYEGQHTHQSPVMPRGSIRILSESTNCLVADHDVATTGILFQHNVPGQPFMYNPLQPFLTNDSSFLSPRPPPSSVPPPSLSSRASLLQDNGLLQDLVPLQVRKEPKDEQNG | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 939405 | 941099 | - | Cp4.1LG08g05270.1 | Cpe08g00144 | 473110 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00144 | 323 | PANTHER | WRKY TRANSCRIPTION FACTOR 48-RELATED | 87 | 309 | - | - | |
Cpe08g00144 | 323 | MobiDBLite | consensus disorder prediction | 274 | 299 | - | - | |
Cpe08g00144 | 323 | MobiDBLite | consensus disorder prediction | 86 | 151 | - | - | |
Cpe08g00144 | 323 | Pfam | WRKY DNA -binding domain | 164 | 221 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00144 | 323 | SMART | WRKY_cls | 163 | 222 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00144 | 323 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 87 | 309 | IPR044810 | GO:0003700 | |
Cpe08g00144 | 323 | Gene3D | WRKY domain | 148 | 224 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00144 | 323 | SUPERFAMILY | WRKY DNA-binding domain | 155 | 223 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00144 | 323 | ProSiteProfiles | WRKY domain profile. | 158 | 223 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00144 | 323 | MobiDBLite | consensus disorder prediction | 93 | 125 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe08g00144 | Cpe12g00331 | CCT | |
Cpe08g00144 | Cpe12g00331 | ECH | |
Cpe03g01319 | Cpe08g00144 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00144 | Cpe-Chr8:939405 | Cpe15g00881 | Cpe-Chr15:8508582 | 1.61E-43 | dispersed | |
Cpe12g00331 | Cpe-Chr12:2190645 | Cpe08g00144 | Cpe-Chr8:939405 | 3.63E-60 | wgd | |
Cpe03g01319 | Cpe-Chr3:10730902 | Cpe08g00144 | Cpe-Chr8:939405 | 1.30E-114 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49822 | PF03106 | WRKY | 1.80E-25 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00144 | - | - | bhj:120088001 | 356.681 |