Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe08g00146 | ATGGCGTCGTCTCTGTTTCTGAATCCTGTGGCGAGTTCTGAGCGATCGCGTGATTCGTCCAGAAAGAAAAAGAAGAAGAAAGAGGCGAGGGAGGACGGTCGTCAAGATCAGGATCACTTGAAGTGGAAATCGCAAGCGCAGCATCAAATTTACTCGTCGAAGCTGTTGCGCGCCTTGAGTCAGGTCAGGATCAGTTCTCCTTATTCCCCGTCGGCGCCGAACGAGATGCCACGGCGTGGCCAAGCCGTTCGGGAGGCGGCGGATACGGTTCTGGCGATGACGGCGAAAGGAAGAAGTAGGTGGAGCAGAGCAATCTTGACGAACCGTCTGAAGCTCAAGTTTCGAAAGCACAATCGGCAGAAGGCGCGTGTGAGTGGAAGCAGCCGAACGAAGAAGCCGAGAGTTAGCGTTTTGCGGTTGAAAGGGAAGGGATTACCTACTGTACAGAGAAAAGTCCGGCTTCTCGGCCGGCTGGTTCCCGGCTGCCGGAAGCAACCGCTGCCGGTGATTCTGGATGAAGCAACTGATTACATACCCGCACTGGACATGCAGATCCGAGTCATGAGCGCCATATTCAACCTGGTTTCAAGCTCTTCGTCTTCTCCTGGTATGGATTCTTCCATCTCCCAACCTTCTTCTACCTGA | 645 | 53.95 | MASSLFLNPVASSERSRDSSRKKKKKKEAREDGRQDQDHLKWKSQAQHQIYSSKLLRALSQVRISSPYSPSAPNEMPRRGQAVREAADTVLAMTAKGRSRWSRAILTNRLKLKFRKHNRQKARVSGSSRTKKPRVSVLRLKGKGLPTVQRKVRLLGRLVPGCRKQPLPVILDEATDYIPALDMQIRVMSAIFNLVSSSSSSPGMDSSISQPSST | 214 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 956328 | 956972 | - | Cp4.1LG08g05360.1 | Cpe08g00146 | 473112 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe08g00146 | 214 | MobiDBLite | consensus disorder prediction | 25 | 43 | - | - | |
| Cpe08g00146 | 214 | CDD | bHLH_AtIBH1_like | 137 | 191 | IPR044549 | GO:0006355 | |
| Cpe08g00146 | 214 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
| Cpe08g00146 | 214 | PANTHER | TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1 | 7 | 210 | - | - | |
| Cpe08g00146 | 214 | PANTHER | TRANSCRIPTION FACTOR IBH1-LIKE 1 | 7 | 210 | IPR044660 | GO:0006355 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe08g00146 | Cpe-Chr8:956328 | Cpe17g00075 | Cpe-Chr17:429216 | 3.17E-88 | dispersed | |
| Cpe12g00330 | Cpe-Chr12:2174973 | Cpe08g00146 | Cpe-Chr8:956328 | 1.84E-80 | wgd | |
| Cpe03g01321 | Cpe-Chr3:10747008 | Cpe08g00146 | Cpe-Chr8:956328 | 2.43E-107 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe08g00146 | - | - | csv:105434845 | 313.538 |