Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00164 ATGGCGTTCAACTTCTGGGTCACCGCCACCGTCGATCTGCTCCTCCTCCTGATCTTCACGGTCATACCCTTTTCGATTTGTCAGCCAACTGACCAAGCTCCGCCTCCCTCCGCCGATTCTTGCAATAGTATCTTCTTGTCCTATAGTTTCAACCAAGGAACGAAGCTCCCCCCTAATGTCACTGATCGGACCCGTCAGCCGTACCGATTCGAGTCTACTCTCTTGATTCTCAATAACGGCCTTCAGGAGCTTAAGTCTTGGAAGGTTTTTGTGGGGTTTCAGCACGATGAGTTCTTGGTCTCGGCTTCCGGCGCCGTCCTTGCCGATGGGAATAGCGTTCCCGGAAACGTCGGTAATGGGACCGTCTTTGCTGGTTTTCCGATGACCGATTTGAAGACGGCGATTGAAACTGCTGGAGACTTCACTCAGATGCAGGTCCAAGTCAAATTGGTTGGGACCCAATTTGGGGTTGCCCCTCCGAATAGTCCGATGCCTACGAATATATCTCTTGCTAATGATGGATACCTCTGCCCTCGGCCAACTCTACTAGGAAAGAGTGAGATGCACGTCTGTTGTAGACCCGATCCAAGCGTTAAAACAAACATCACAACTAGTGAAGAGTTCTTGCCTCGCCAAAATGGCGATCTAACGATCATGTATGATGTGACAAGAACCTATGATTCAAGTTATTGGGCACAAGTCAAAATTTCTAACCATAATCCTCTCGGTCGTCTTGATTATTGGAAGTTGAGCTGGGAATGGATGAAGGATGAGTTCATCTTTTCAATGAAAGGTGCTTATCCTTCTGTTGTTGATTCTACTGATTGCATTTTTGGTAGACAAGGCACTTATTATAAGGATTTAGACTTTGCCAATGTATTAAGCTGTGCAAAAAAGCCAACAATTGTTGATTTGCCTCCAACTAAGGCCAACGACACTACGCTCGGGTTGATCCCGTTCTGTTGTCGAAACGGGACGATCTTGCCTTCTCATATGGACTCAAGCAAGTCGATTTCAGCGTTTCAAATGCAAGTTTTTAAAATGCCACCAGATCTCAATAGATCCCAGATTACACCACCTCAGAATTGGAAGATCAGTGGCGTTCTAAACCCGACGTATAAATGTGGTGCTCCGTTGAGGGTAAGTCCTAGCGAATTCCCAGACTCAAGTGGTTTACCATTGAATTCGACTGCAGTGGCTAGTTGGCAAGTTGTTTGTAACATAACTCACGTCAAGGACGACACACCGAAATGCTGTGTTTCGTTTTCGGCTTACTACAACGATTCTGTCGTCCCTTGTCGAACGTGTGCTTGTGGATGCCCGCATAACACTGCTCGTACATGTAATGCAACGTCCTCTGCAATGCTCCTCCCACCGGAAGCCCTTCTTGTTCCGTTTGAGAATAGGAGCGCCATGGCTGTGGCTTGGGCTGGTCTTAAACACTACCCAACTCCCAATCCCATGCCTTGTCCCGATAACTGCGGTGTGAGTATCAATTGGCATTTGTATACCGATTATAGAGACGGATGGAGTGCAAGGATTACGCTCTTCAACTGGGACGAAGTGAACTTTGCAGATTGGTTTGCTGCAGTTCAGATGAAGAAAGCAGCACCTGGTTTCCAGGCAATGTACTCGTTCAACGCGACGACCTTGGAACTGAATGGTGCCAATAATACTATCTTTATGCAGGGTAATCCTGGACTAAACTATCTCGTAGGCGAAACGGACGGAGTCCACCCAGAAAGGGATCCGAGGGTACCCGGAAAACAGCAATCTGTGATATCATTTACAAAGAAGAACATACAAGTTCTTAACATGGCTGCTGGAGATGGGTTCCCCACTAAAGTGTTCTTCAATGGGGAAGAATGTCTACTCCCAAAAACATTCCCTGTTAACGACAGCCGAAGGAACTTAGCTTCGTCGATTCCGAGCATCTTAACGCTACTATTTGTGTTCGTGTTTGTTCAGCAATAG 1974 46.86 MAFNFWVTATVDLLLLLIFTVIPFSICQPTDQAPPPSADSCNSIFLSYSFNQGTKLPPNVTDRTRQPYRFESTLLILNNGLQELKSWKVFVGFQHDEFLVSASGAVLADGNSVPGNVGNGTVFAGFPMTDLKTAIETAGDFTQMQVQVKLVGTQFGVAPPNSPMPTNISLANDGYLCPRPTLLGKSEMHVCCRPDPSVKTNITTSEEFLPRQNGDLTIMYDVTRTYDSSYWAQVKISNHNPLGRLDYWKLSWEWMKDEFIFSMKGAYPSVVDSTDCIFGRQGTYYKDLDFANVLSCAKKPTIVDLPPTKANDTTLGLIPFCCRNGTILPSHMDSSKSISAFQMQVFKMPPDLNRSQITPPQNWKISGVLNPTYKCGAPLRVSPSEFPDSSGLPLNSTAVASWQVVCNITHVKDDTPKCCVSFSAYYNDSVVPCRTCACGCPHNTARTCNATSSAMLLPPEALLVPFENRSAMAVAWAGLKHYPTPNPMPCPDNCGVSINWHLYTDYRDGWSARITLFNWDEVNFADWFAAVQMKKAAPGFQAMYSFNATTLELNGANNTIFMQGNPGLNYLVGETDGVHPERDPRVPGKQQSVISFTKKNIQVLNMAAGDGFPTKVFFNGEECLLPKTFPVNDSRRNLASSIPSILTLLFVFVFVQQ 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1061672 1065287 + Cp4.1LG08g05160.1 Cpe08g00164 473130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00164 657 Pfam COBRA-like protein 230 409 IPR006918 GO:0010215|GO:0031225
Cpe08g00164 657 PANTHER COBRA-LIKE PROTEIN 7 14 654 - -
Cpe08g00164 657 PANTHER COBRA-LIKE PROTEIN 7 14 654 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01343 Cpe08g00164 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00164 Cpe-Chr8:1061672 Cpe02g01400 Cpe-Chr2:12225363 2.72E-38 dispersed
Cpe01g00854 Cpe-Chr1:5055397 Cpe08g00164 Cpe-Chr8:1061672 4.13E-13 transposed
Cpe03g01343 Cpe-Chr3:10899780 Cpe08g00164 Cpe-Chr8:1061672 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00164 - - csv:101209258 1204.5