Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00274 ATGGATTCGAGAGGAAACGAGGATAAATCTCTGAACTCAAAGGATGCTAGTATGGGAAGCATTAGCAGCAAAGATATGATATTTAGAGCAGATAAGATTGATTTGAAAAACCTGGATATGCAGCTGGAAAAGCACTTGAGCCGTGTTTGGTCGAAGAGCGTTGGCGTTGAGACACAAAAGCCTAAGGAGGAGTGGGAGATTGATTTGTCTAAACTCGATATTCGATATGTCGTCGCTCACGGGACTTACGGGACGGTGTTCAGGGGTACATATGACAATCAAGATGTCGCTGTGAAGCTATTGGACTGGGGGGAGGATGGTCTTGCCACATCTGCTGAAACTGCTGCTTTGCGTGCATCGTTTCAGCAAGAGGTTGCTGTCTGGCACAAGCTTGATCATCCTAATGTTACAAAATTTGTTGGAGCTTCAATGGGAGCTACAAATCTTAAGATTCCTTCAAATGGCTCTTCGATGGATGGTCAAAATTCCCTTCCATCTAGAGCCTGCTGTGTTGTTGTTGAGTATCTTCCTGGTGGGACATTAAAACAATACTTGATAAGGAACAGGAAAAAGAAACTTGCCTTTAAGGTTGTGATTCAAATAGCTTTGCATCTCTCCAGAGGGCTTAGCTATCTACACTCCAAGAAGATTGTACACCGTGATGTCAAAACTGAAAATATGTTGTTAGATAGTCAAAGAACTCTCAAAATTGCTGATTTTGGGGTTGCCCGTGTCGAAGCTCAGAATCCAAGAGACATGACTGGGGAAACTGGTACTCTTGGATACATGGCCCCAGAGGTTCTTGATGGGAAGCCGTACAATAGAAGATGTGATGTCTACAGCTTTGGCATCTGCTTATGGGAAATTTACTGTTGTGATATGCCATACCCCGATCTTAGTTTTGCTGATGTCTCATCTGCTGTTGTTCGACAGAACCTACGACCTGATATCCCAAAGTGCTGTCCTAGTTCTCTGGCTAATGTGATGAAGAAATGCTGGGATGGCAACCCGTCCAAACGCCCTGAAATGGACGAGGTTGTCAAAATGTTGGAAGCCATTGATACAAGTAAAGGAGGTGGGATGGTTTCTGATGACCAAGTCTCTAGAAATAAAGCAGAGTCAAAACTAGTTACCAAGCTTTCTTTGCCTTCAGGACTTGTCAATGAAGCGTTCTCTTCCCAATAG 1185 43.71 MDSRGNEDKSLNSKDASMGSISSKDMIFRADKIDLKNLDMQLEKHLSRVWSKSVGVETQKPKEEWEIDLSKLDIRYVVAHGTYGTVFRGTYDNQDVAVKLLDWGEDGLATSAETAALRASFQQEVAVWHKLDHPNVTKFVGASMGATNLKIPSNGSSMDGQNSLPSRACCVVVEYLPGGTLKQYLIRNRKKKLAFKVVIQIALHLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPDIPKCCPSSLANVMKKCWDGNPSKRPEMDEVVKMLEAIDTSKGGGMVSDDQVSRNKAESKLVTKLSLPSGLVNEAFSSQ 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1762011 1765943 - Cp4.1LG08g04080.1 Cpe08g00274 473240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00274 394 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 12 371 - -
Cpe08g00274 394 PANTHER KINASE ATMRK1, PUTATIVE-RELATED 12 371 - -
Cpe08g00274 394 Gene3D Transferase(Phosphotransferase) domain 1 176 382 - -
Cpe08g00274 394 ProSiteProfiles Protein kinase domain profile. 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00274 394 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672|GO:0006468
Cpe08g00274 394 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Cpe08g00274 394 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672|GO:0006468
Cpe08g00274 394 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672|GO:0006468
Cpe08g00274 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Cpe08g00274 394 SMART serkin_6 72 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00274 394 Pfam Protein tyrosine and serine/threonine kinase 76 350 IPR001245 GO:0004672|GO:0006468
Cpe08g00274 394 Gene3D Phosphorylase Kinase; domain 1 61 153 - -
Cpe08g00274 394 SUPERFAMILY Protein kinase-like (PK-like) 51 350 IPR011009 -
Cpe08g00274 394 CDD STKc_MAP3K-like 78 350 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01454 Cpe08g00274 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01454 Cpe-Chr3:11598656 Cpe08g00274 Cpe-Chr8:1762011 6.64E-107 dispersed
Cpe04g00554 Cpe-Chr4:5962969 Cpe08g00274 Cpe-Chr8:1762011 2.19E-178 dispersed
Cpe04g01549 Cpe-Chr4:12135714 Cpe08g00274 Cpe-Chr8:1762011 0 dispersed
Cpe08g00274 Cpe-Chr8:1762011 Cpe18g00839 Cpe-Chr18:7743553 0 dispersed
Cpe17g00866 Cpe-Chr17:6706885 Cpe08g00274 Cpe-Chr8:1762011 6.48E-101 wgd
Cpe03g01453 Cpe-Chr3:11593287 Cpe08g00274 Cpe-Chr8:1762011 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62540 PF07714 PK_Tyr_Ser-Thr 4.90E-60 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00274 - - jre:108989477 640.573