Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00291 ATGGTGAGGGAGAGGGATTATAAAGTGGTCATTAAGTTCGTTGCAAGGGCAAATTTGCAGTATTTGGGTCAGTTCCTTGCCGGTAAGCGTGCCAATGCACCACAAGAAGCCATTCAAATACTGGACATTGTCTTGAGAGAGCTATCATCCAAAAGGAGGGAGAGGGATTATAAAGTGGTCATTAAGTTCGTTGCAAGGGCAAATTTGCAGTATTTGGGTCAGTTCCTTGCCGGTAAGCGTGCCAATGCACCACAAGAAGCCATTCAAATACTGGACATTGTCTTGAGAGAGCTATCATCCAAAAGGTACTGTCCTATAGGAAGATCCTTCTTTTCTCCTGATATCAGGTCACCTCAACGTCTCGGTGATGGCCTAGAATCATGGCGCGGTTTTTACCAGAGTATAAGGCCTACTCAAATGGGACTGTCTCTGAACATTGATATGGCTTCAGCTGCATTCATCGAGCCTCTCCCTATCCTCGAGTTTGTTGCTCAGCTTCTCGGGAAAGATGTTTTGTCTCGGCCACTGTCTGATTCCGATCGCATCAAAAAGGCTCTTAGAGGGGTGAAAGTCGACGTAACGCACCGGGGTAATGTAAGGCGTAAGTATCGTATTTCGGGGCTAACGTCACAGCCTACAAGAGAGCTAGTGTTTCCTGTTGACGACAACTCGACCATGAAGTCGGTTGTCGAGTACTTCCAGGAGATGTATGGCTTCACCATCCAACATGCTCATCTGCCTTGCCTTCAAGTAGGAAATCAGAAGAAGGCCAATTATTTACCAATGGAGACTGTTCAACATAATGCCTATAACAACGATCCTTATGCAAAGGAGTTTGGGATAAATGTTAGTGAAAAGATGACTTCTGTTGAAGCTAGAATTCTTCCTCCTCCATGGCTGAAATACCATGATACTGGAAAAGAGAAGGATTGCTTGCCTCAAGTGGGTCAATGGAATATGATGAATAAGAAAATGATTAATGGAATGACGGTTAGTCGGTGGGCGTGTATCAACTTCTCTAGGAGCGTGCAGGAGAGCGTTGCTCGTGGATTTTGTTCTGAACTTGCTCAAATGTGTCAAGTGTCTGGAATGGAATTCAATACAGAACCAGTTATTCCAATATACAATGCTAGGCCAGAACAAGTAGAGAAAGCTTTGAAGCATGTTTATCATGCTTCCATGAACAAGACTAAAGGAAAAGAGTTAGAGCTATTATTAGCTATCTTACCCGACAGTAACGGATCGCTTTACGGTGATCTTAAGCGAATCTGTGAGACGGATCTTGGTTTAATATCACAATGCTGTCTTACAAAATATGTGTTCAAGATTAGTAAACAGTATCTTGCTAATGTTTCATTGAAGATCAATGTCAAGATGGGTGGTAGAAACACTGTTCTTCTAGATGCTATCAGCTGCAGGATACCGCTCGTAAGCGACATACCGACTATAATATTTGGAGCAGACGTGACTCATCCAGAGAACGGCGAAGATTCGAGCCCTTCGATAGCTGCTGTTGTAGCATCTCAGGATTGGCCTGAAGTGACAAAGTATGCTGGACTAGTATGTGCTCAGGCTCATAGACAAGAACTTATACAAGACTTGTACAAAACTTGGCAGGATCCTGTCCGTGGCACCGTCAGCGGGGGCATGATCAGGGCAGAAGCCTCTAAGAATAATATTTTACAGGCATGTGCTTCTTTAGAACTGAATTACCAGCCACCCGTGACGTTCATCGTCGTACAAAAACGACATCACACCCAACTGTTTGCCAACAACCATAGAGACAGAAGTAGCACAGACAGGAGTGGAAACATTTTACCTGGCACCGTAGTCGACTCCAAAATATGCCACCCGACAGAATTTGATTTCTATCTTTGTAGCCATGCTGGAATTCAGGGGACAAGCCGACCAGCTCATTACCATGTTCTTTGGGATGAAAACAATTTTACAGCAGATGGGATTCAGTCCTTAACCAATAATCTTTGCTACACGTATGCAAGGTGTACGCGTTCGGTTTCTATCGTCCCTCCAGCATACTATGCACATTTAGCAGCATTCCGAGCTCGATTCTACATGGAACCAGAGATGCAAGAGAATGGCACGAGCGGTCGTTCTGCTAAGAGTGCGACCGGGGTTCGCCCTTTGCCAGCTCTAAAGGAAAATGTGAAGAGAAAATCGGAACCACCAAGCAAAGGGGAGGCTCGTAGTCGGAGCGATGACCGGAAAGGTTCGGGTTCCTCTGGCATTAGTTCCCTT 2256 44.95 MVRERDYKVVIKFVARANLQYLGQFLAGKRANAPQEAIQILDIVLRELSSKRRERDYKVVIKFVARANLQYLGQFLAGKRANAPQEAIQILDIVLRELSSKRYCPIGRSFFSPDIRSPQRLGDGLESWRGFYQSIRPTQMGLSLNIDMASAAFIEPLPILEFVAQLLGKDVLSRPLSDSDRIKKALRGVKVDVTHRGNVRRKYRISGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHAHLPCLQVGNQKKANYLPMETVQHNAYNNDPYAKEFGINVSEKMTSVEARILPPPWLKYHDTGKEKDCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQESVARGFCSELAQMCQVSGMEFNTEPVIPIYNARPEQVEKALKHVYHASMNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGLISQCCLTKYVFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRAEASKNNILQACASLELNYQPPVTFIVVQKRHHTQLFANNHRDRSSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPEMQENGTSGRSAKSATGVRPLPALKENVKRKSEPPSKGEARSRSDDRKGSGSSGISSL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1866829 1875488 - Cp4.1LG08g03890.1 Cpe08g00291 473257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00291 752 Pfam Argonaute linker 1 domain 105 154 IPR014811 -
Cpe08g00291 752 PANTHER PROTEIN ARGONAUTE 10 50 270 - -
Cpe08g00291 752 PANTHER PROTEIN ARGONAUTE 10 271 552 - -
Cpe08g00291 752 Gene3D - 473 726 IPR036397 GO:0003676
Cpe08g00291 752 ProSiteProfiles PAZ domain profile. 157 269 IPR003100 GO:0005515
Cpe08g00291 752 Pfam Argonaute linker 2 domain 264 302 IPR032472 -
Cpe08g00291 752 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 50 270 - -
Cpe08g00291 752 PANTHER PROTEIN ARGONAUTE 10 3 52 - -
Cpe08g00291 752 MobiDBLite consensus disorder prediction 718 742 - -
Cpe08g00291 752 CDD PAZ_argonaute_like 156 266 - -
Cpe08g00291 752 PANTHER PROTEIN ARGONAUTE 10 559 723 - -
Cpe08g00291 752 Gene3D paz domain 150 268 - -
Cpe08g00291 752 Gene3D - 294 467 - -
Cpe08g00291 752 SMART DUF1785_2 104 156 IPR014811 -
Cpe08g00291 752 SUPERFAMILY Ribonuclease H-like 392 693 IPR012337 -
Cpe08g00291 752 Pfam PAZ domain 179 266 IPR003100 GO:0005515
Cpe08g00291 752 ProSiteProfiles Piwi domain profile. 404 693 IPR003165 GO:0003676
Cpe08g00291 752 SUPERFAMILY PAZ domain 75 266 IPR036085 GO:0005515
Cpe08g00291 752 SMART Piwi_a_2 404 693 IPR003165 GO:0003676
Cpe08g00291 752 Pfam Mid domain of argonaute 313 390 IPR032473 -
Cpe08g00291 752 Pfam Piwi domain 558 692 IPR003165 GO:0003676
Cpe08g00291 752 Pfam Piwi domain 405 539 IPR003165 GO:0003676
Cpe08g00291 752 Pfam N-terminal domain of argonaute 50 95 IPR032474 -
Cpe08g00291 752 CDD Piwi_ago-like 274 692 IPR045246 -
Cpe08g00291 752 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 559 723 - -
Cpe08g00291 752 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 3 52 - -
Cpe08g00291 752 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 271 552 - -
Cpe08g00291 752 SMART PAZ_2_a_3 161 293 IPR003100 GO:0005515
Cpe08g00291 752 MobiDBLite consensus disorder prediction 697 752 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g01473 Cpe08g00291 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00291 Cpe-Chr8:1866829 Cpe20g00042 Cpe-Chr20:188486 0 dispersed
Cpe03g01473 Cpe-Chr3:11678135 Cpe08g00291 Cpe-Chr8:1866829 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00291 K11593 - csv:101221352 1256.12