Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00366 ATGGCTGGTCAAGTAAATCTAGCGGTTGGGTGTCTTGTTTGGATTGAGGATCCTGAGGTAGCCTGGATAGATGGGGAAGTTGTGGAAGTTAATGGTCAAGATATCAGAGTACTCTGTTCATCAGGAACTACTGTTGAGGCCAAATCATCAAATGCCTATCCAAAGGATCCTGAATTTCCATCATGTGGTGTGGATGATATGACAAAACTAGCTTATTTACACGAGCCAGGACTGCTACAGAACTTGAAATGTCGTTATGATGTTAATGAAATTTATACCTATACTGGGGGTATACTAATAGCCGTAAATCCTTTTCGAAGACTTCCTCATTTATATGATAATGGCATAATGCAACAATATAAAGGGGCGGATTTAGGTGAGCTGAGCCCGCATCCCTTTGCCATTGCAAATTCTGCATATAGACAGATGATTAATGAGGGTATAAGCCAGTCAATTTTAGTTAGCGGGGAAAGTGGAGCTGGTAAAACGGAGAGTACAAAGATGCTTATGCGCTATCTTGCCCATGTTGGAGGGAGAGATGGAGGGAAGGCTGCAACTGGTGAACGCTCTGTAGAGCAGCAAGTACTAGAGTCCAACCCTGTTCTAGAAGCATTTGGCAATGCAAAGACTGTTAGAAACAATAATTCCAGTCGGTTTGGTAAATTTGTGGAGATCCAATTTGACCGAAGTTGGAGAATTTCTGGAGCTGCTATTAGAACTTATTTATTAGAACGTTCCCGTGTTTGCCAAGTGTCTGATCCTGAGAGGAATTATCATTGCTTTTATATGCTTTGTGCATCAACAGAGGAAGTTGAAAAGTATAAGTTAGGGAATCCAAGAACATTCCATTATCTTAATCAATCTAATTGCTATGAACTTGATGGACTGGACGAGTCCAAGGAATATACTTCTACTAGAGAAGCTATGGATGTCGTTGGAATAAGTACAGCTGAGCAGGATGCTATATTTCGAGTGGTAGCTGCAGTACTTCATTTGGGCAATGTTGAATTTGCAAAGGGGAAGGATGCGGATTCCTCTGAACCTAAGGATGACAAAGCTCGGTTCCATCTCAAAATGGCAGCAGAACTATTCATGTGTGATGAGAAGGCTCTTGAAGATTCAATGTGTACTCGTGTGATAGTTACACGTGATGAAACCATAACTAAATGTCTCGATACAGTATCTGCAACTCTTAGTAGGGATGCTTTGGCAAAAATCGTATATTCAAGATTATTTGATTGGATTGTTGATAAGATTAATAACTCAATTGGCCAAGATCGTGATTCAAAACACTTAATCGGGGTTCTGGATATCTATGGATTCGAGAGTTTCAAGACAAACAGGTGCTTAACCGAATGTTGTTTACAGCATGTGTTCAAGATGGAGCAAGAAGAATATACAAAAGAAGAAATTAACTGGAGTTATATTGATTTTATTGATAATCAGGATGTTCTTGATCTCATTGAGAAGGTGCAGAAGAGTTTCTTTCCTTTCGTGACTAATTTGAATTTTTCTGCAGATTTTATAGAACTCATGTTTCCGAGATCCACACATGAGACTTTTGCTCAGAAACTATATCAAACTTTTAGGGACCATAAGCGATTTAGTAAGCCTAAATTGTCACGAACTGACTTCACAATTTGTCATTATGCTGGCGATGTTACGTACCAAACTGAACTCTTCTTGGACAAAAACAAAGATTATGTTGTTGCGGAGCATCAAGCACTGTTGGGTGCTTCTAAGTGCTGCTTTGTTGCAGGGCTATTCCCCCCTTTACCTGAAGAAACCTCCAAATCATCCAAGTTCTCATCAATAGGGACTAGATTTAAGCAACAACTTCAAACTTTGCTCGAGACACTAAATGCTACTGAGCCACACTACATACGCTGTGTAAAGCCAAACAATCTTCTTAAACCATCCATCTTTGAGAATAATAATGTTTTACAGCAGCTCCGATGTGGGGGAGTCATGGAAGCAATCAGGATCAGTTGTGCTGGATATCCCACTAGGAAGACGTTTGATGAATTTATTGGTCGGTTTACTATCTTGGCACCTGATGTTTTGAAGGGGAGCTCTGATGAAGCCAATGCGTGTAAGAAGCTTTTGCAGAAAGTTAACCTTAATGGGTATCAGATTGGTAAAACCAAAGTGTTTCTTAGGGCTGGTCAAATGGCACAATTAGATGGCTGCCGAACTGAGGTCTTGGGAAGATCTGCTAGTGTTATCCAAAGGAAAGTTCGCTCATATTTGGAACGGAATCGTTTTATTTCGTTGCGGTTGGCTGCTATACAAATTCAAGCACTTTGTAGAGGGGAAGTTGCACGCCAGCAGTATGAAAACATCAGAATGGAAGCTGCTTCTATCAAAATCCAAAAGTATTGGCGCATGTGTTCTGCCCGAAGTTCCTATAAAAGATTGCGCTCTTCAGCTGTAGCTATTCAGGCTGGTATCCATGGCATGGTTGCTCGTAAAGAGCTCAAGTTCAGGAGGGATACAAGAGCTGCAATTATCATTCAGGCTGCTAAGGAAACTGGCGCTCTTCAAGCTGCCAAAGATATGTTGGAAAAGCAAGTGGAAGAACTAACATTGAGATTGGAGCAAGAGAAACAAATGAGGGCTGACATGGAGGATGCCAAGACTCAAGAAAACACAAAATTGAAGTCTGCTTTGGAAGAAATACAAACTCAATTTCAGGAAACGAAAGCACTGCTTATTGAGGAACGTGAAGCTGCAAAGAAAGTAGTTGAGGAACGTGAAGCTGCAAAGAAAGCAGTTGAGGAAATCCGTGAAGCTTCAAAGAAAGTAGTTCAGGAAGTCCCAATAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAATAAAGTAGTTGAGGAAGTCCCAATAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGAAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGAAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGAAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTAGTTGAGGAAGTCCCAGCGAAGCAAGTAGTTGAGGAAGTCCCAGTAGCTGCAAAGGAAGTTGTTGAGGAAGTCCCAGTAGCTGCAAAGAAAGTAGTTGAGGAAGTCCCAGTAGCTGCACAGAAAGTAGTTGTGGAAGTCCCAGTCATACAGGAGGTTCCAGTTGTTGATCATGAGCTTATCAATAAGCTAACTACTGAAAATGAAGAACTTAAGGCTCTTGTTAGTTCTTTGGAAAGTAAAATTGATGAAACAGAAAGGAAATTTGAGGAAAGTAACAGACTTAGTGAAGAGCGGCTGAAGCAGGCTACGGAGGCAGAGTCAAAGATAATAGAATTAAAAACTGCCATGCAAAGGCTTGAGGAAAAGTTATCTGACTTGGAAACTGAGGACCAAATTCTGAGGCAGCAAGCACTGCAAAAGCCTCCTTCAAGAAAAATGTCTGGACATATAACAATGCAGGAATTATTAAGCAATGCACCATCAAAAAAGTATGGTACCGATGCTGATGCAAAATTGAGGAGATCCCAAATTGAAAGGCAGAACGAAGGCATGGATGCTCTATCGAAATACTTGACACGGGATCTTGGGTACAGTGAGGGAAAACCTGTTGCTGCTTTTGTAATTTATAAATCTCTTCTCCATTGGAGATCATTTGAAGCAGAAAAAACAAGTGTATTTGATCGTCTTATTCAGATAATTGGTTCTGCAATTGAGAATCAGGATGATTATGATCACATGGCTTATTGGTTATCCAACACAACTACATTGTTGTTTCTTCTTCAAAAGAGTTTAAAAGCCACACCACGAAAGCCTCCCACCCCGACATCATTGTTTGAGCGAATGACCCAAGGGTTTCGTTCATCTTCTGCCAACCTTCCAGTTGGCACCCTTGATGTTGTGCGGCAAGTTGAAGCCAAATATCCTGCTCTACTTTTCAAGCAGCAGCTAACAGCGTATGTAGAAAAGATATATGGAATAGTTAGAGACAACCTGAAGAAGGAACTATCGCCGTTGCTTTCAACTTGTGTCCAAGCTCCCAAAACTTCGGAAGAGAATGTTGAGGAATCATCTGACGAGACAAAGAGTAGCAGCCTTCTCAATAGTTCATGGGGCATCATCATCCATCACCTTAATCATCATCTTAGTAGATTGCAGACGAACTTCGTGCCTGCCGTTTTGGTCCAGAAGATATTCACTCAGGTTTTTTCATACATCAACGTACAGCTTTTCAATAGTCTTCTACTTCGTCAAGAGTGCTGCACGTTTAGTAATGGAGAATATGTGAAGTCAGGACTTGCTGAGTTAGAGAGTTGGTGTACCCAAGCCAAAGAAGAGTATGTCGGGTTATCTTGGGATGAGCTAAAACCAGTGAGGCAAGCTGTTGGATTCTTGGTTATTCACCAGAAGTCTAGAATATCTTATGATGAAATTACAAATGACCTCTGTCCAATATTAAGCGTTCAGCAGCTTTATAGAATATGTACTCTTTATTGTGACGACAATTACAATACCAGAAGCGTAGCTGAAGAGGTTATTTCTAGCATGAAGGTTTTGATGCCCGAAGATACCAATGATGAAGACAATAATTCCTTTTTGTTGGATGACAATTCCAGCATACCTTTCTCAGTCGATGACATATCCAGTTCCTTGCAAGATAAGAATTTTCAAGATATTAAGCCTCCAGCAGAACTACTTGACAATCCGAAATCAAGA 4782 41.07 MAGQVNLAVGCLVWIEDPEVAWIDGEVVEVNGQDIRVLCSSGTTVEAKSSNAYPKDPEFPSCGVDDMTKLAYLHEPGLLQNLKCRYDVNEIYTYTGGILIAVNPFRRLPHLYDNGIMQQYKGADLGELSPHPFAIANSAYRQMINEGISQSILVSGESGAGKTESTKMLMRYLAHVGGRDGGKAATGERSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDRSWRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCASTEEVEKYKLGNPRTFHYLNQSNCYELDGLDESKEYTSTREAMDVVGISTAEQDAIFRVVAAVLHLGNVEFAKGKDADSSEPKDDKARFHLKMAAELFMCDEKALEDSMCTRVIVTRDETITKCLDTVSATLSRDALAKIVYSRLFDWIVDKINNSIGQDRDSKHLIGVLDIYGFESFKTNRCLTECCLQHVFKMEQEEYTKEEINWSYIDFIDNQDVLDLIEKVQKSFFPFVTNLNFSADFIELMFPRSTHETFAQKLYQTFRDHKRFSKPKLSRTDFTICHYAGDVTYQTELFLDKNKDYVVAEHQALLGASKCCFVAGLFPPLPEETSKSSKFSSIGTRFKQQLQTLLETLNATEPHYIRCVKPNNLLKPSIFENNNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFIGRFTILAPDVLKGSSDEANACKKLLQKVNLNGYQIGKTKVFLRAGQMAQLDGCRTEVLGRSASVIQRKVRSYLERNRFISLRLAAIQIQALCRGEVARQQYENIRMEAASIKIQKYWRMCSARSSYKRLRSSAVAIQAGIHGMVARKELKFRRDTRAAIIIQAAKETGALQAAKDMLEKQVEELTLRLEQEKQMRADMEDAKTQENTKLKSALEEIQTQFQETKALLIEEREAAKKVVEEREAAKKAVEEIREASKKVVQEVPIAAKKVVEEVPVAAKEVVEEVPVAANKVVEEVPIAAKEVVEEVPEAAKEVVEEVPEAAKEVVEEVPEAAKEVVEEVPVAAKEVVEEVPAKQVVEEVPVAAKEVVEEVPVAAKKVVEEVPVAAQKVVVEVPVIQEVPVVDHELINKLTTENEELKALVSSLESKIDETERKFEESNRLSEERLKQATEAESKIIELKTAMQRLEEKLSDLETEDQILRQQALQKPPSRKMSGHITMQELLSNAPSKKYGTDADAKLRRSQIERQNEGMDALSKYLTRDLGYSEGKPVAAFVIYKSLLHWRSFEAEKTSVFDRLIQIIGSAIENQDDYDHMAYWLSNTTTLLFLLQKSLKATPRKPPTPTSLFERMTQGFRSSSANLPVGTLDVVRQVEAKYPALLFKQQLTAYVEKIYGIVRDNLKKELSPLLSTCVQAPKTSEENVEESSDETKSSSLLNSSWGIIIHHLNHHLSRLQTNFVPAVLVQKIFTQVFSYINVQLFNSLLLRQECCTFSNGEYVKSGLAELESWCTQAKEEYVGLSWDELKPVRQAVGFLVIHQKSRISYDEITNDLCPILSVQQLYRICTLYCDDNYNTRSVAEEVISSMKVLMPEDTNDEDNNSFLLDDNSSIPFSVDDISSSLQDKNFQDIKPPAELLDNPKSR 1594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2271354 2294586 + Cp4.1LG08g03240.1 Cpe08g00366 473332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00366 1594 Pfam Myosin N-terminal SH3-like domain 12 50 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 ProSiteProfiles Dilute domain profile. 1250 1544 IPR002710 -
Cpe08g00366 1594 Gene3D - 785 837 - -
Cpe08g00366 1594 Gene3D - 735 784 - -
Cpe08g00366 1594 Gene3D - 256 313 - -
Cpe08g00366 1594 PANTHER MYOSIN-7 840 1591 - -
Cpe08g00366 1594 PANTHER MYOSIN-7 6 840 - -
Cpe08g00366 1594 CDD MYSc_Myo11 76 720 IPR036018 -
Cpe08g00366 1594 Gene3D Myosin VI head, motor domain, U50 subdomain 315 601 - -
Cpe08g00366 1594 MobiDBLite consensus disorder prediction 1575 1594 - -
Cpe08g00366 1594 Coils Coil 1083 1117 - -
Cpe08g00366 1594 Pfam DIL domain 1420 1522 IPR002710 -
Cpe08g00366 1594 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Cpe08g00366 1594 PRINTS Myosin heavy chain signature 474 502 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PRINTS Myosin heavy chain signature 200 227 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 Gene3D Kinesin motor domain 65 662 IPR036961 -
Cpe08g00366 1594 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Cpe08g00366 1594 CDD MyosinXI_CBD 1201 1567 IPR037975 GO:0007015
Cpe08g00366 1594 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Cpe08g00366 1594 Pfam IQ calmodulin-binding motif 785 804 IPR000048 GO:0005515
Cpe08g00366 1594 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Cpe08g00366 1594 SMART iq_5 805 827 IPR000048 GO:0005515
Cpe08g00366 1594 SMART iq_5 782 804 IPR000048 GO:0005515
Cpe08g00366 1594 SMART iq_5 757 779 IPR000048 GO:0005515
Cpe08g00366 1594 SMART iq_5 734 756 IPR000048 GO:0005515
Cpe08g00366 1594 Coils Coil 1125 1159 - -
Cpe08g00366 1594 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PANTHER MYOSIN 6 840 - -
Cpe08g00366 1594 Coils Coil 851 938 - -
Cpe08g00366 1594 Gene3D - 442 623 - -
Cpe08g00366 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 787 IPR027417 -
Cpe08g00366 1594 Gene3D - 666 732 - -
Cpe08g00366 1594 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Cpe08g00366 1594 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 PANTHER MYOSIN 840 1591 - -
Cpe08g00366 1594 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe08g00366 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 782 830 IPR027417 -
Cpe08g00366 1594 SMART DIL_2 1419 1526 IPR002710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00366 Cpe-Chr8:2271354 Cpe17g00648 Cpe-Chr17:5286872 0 dispersed
Cpe08g00366 Cpe-Chr8:2271354 Cpe17g00969 Cpe-Chr17:7393051 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00366 K10357 - csv:101221506 1552.73