Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00468 ATGGCCCTATTCTGCAAAAATCCCGTGGACCGATTTAGGGTTTTCCCTTCAAAACCTAACCTCCATGTCCCCGCCGCTGCCGCGGCGGACGGCGGCGATACGACCGCTGATTCCGCCAGAAGCAAAACGTTTCAACTCGCCGTCCTCTTTACTGGATCGATTTGGATGCTTGTTCTTTGGTCATTGAAGCTTCAACCATGCCCTAAAATTTCAAAGCCGTTCATAATGGCTCTCCTCGGCCCCGCTTTATTCCACACAATCGGCCATATCTCCGCCTGCGTTTCGTTCTCAAAAGTCGCTGTTTCTTTCACTCATGTCATTAAATCGGCCGAACCAGTCTTCTCCGTTCTGTTCTCTTCATTCCTCGGCGATTCATATCCAATCCAGGTCTGGCTCTCGATTCTCCCCATTGTTTTTGGCTGCTCTCTGGCCGCCATTACTGAAGCTACCTTCAATTTCGAAGGTCTTTCAGGCGCCATGATCAGCAACGTAGGGTTTGTGTTAAGAAACATTTACTCAAAAAAGAGCTTGCAGAGCTTCAAGGAGGTTAATGGGTTGAATTTATATGGGTGTATTAGCATAATTTCTTTGTTGTATCTGTTTCCTGTGGCGATTTTCGTTGAAGGGTCGAAATGGGTTCAAGGATATCATCAAGCAATTTCCTCCATTGGTAATGCTTCAACGTTATATCTCTGGGTTTTGATTTCTGGAATCTTTTATCATCTTTATAATCAATCTTCTTATCAAGCTCTTGATGAAATTAGTCCTTTGACATTCTCTGTTGGGAATACAATGAAAAGAGTGGTTGTGATTGTAGCTTCTGTGTTGGTGTTTAGAAACCCAATTAGGCCTTTGAATGCTATTGGTTCTGCTCTTGCCATTTTTGGGACTTTTCTGTACTCTCAGGCGACGTCGAAAAAGAGTTCTAAGAAGATTGAGGAAGGAGAAAAGAAGGATTGA 960 43.96 MALFCKNPVDRFRVFPSKPNLHVPAAAAADGGDTTADSARSKTFQLAVLFTGSIWMLVLWSLKLQPCPKISKPFIMALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKKSLQSFKEVNGLNLYGCISIISLLYLFPVAIFVEGSKWVQGYHQAISSIGNASTLYLWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPIRPLNAIGSALAIFGTFLYSQATSKKSSKKIEEGEKKD 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3008989 3010474 + Cp4.1LG08g02120.1 Cpe08g00468 473434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00468 319 PANTHER XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTIC 49 314 - -
Cpe08g00468 319 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 303 - -
Cpe08g00468 319 Pfam Triose-phosphate Transporter family 47 301 IPR004853 -
Cpe08g00468 319 PANTHER SOLUTE CARRIER FAMILY 35 49 314 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00468 Cpe-Chr8:3008989 Cpe19g00971 Cpe-Chr19:6847618 8.30E-80 dispersed
Cpe08g00468 Cpe-Chr8:3008989 Cpe06g00755 Cpe-Chr6:4760524 2.72E-85 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00468 K15283 - csv:101219051 524.628