Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00491 ATGGAGGTGTTGCCGGCGGCGGGGCGATTTGGGCGCGGCAGAGGACCTACCGATCTGCGACCATCTCTGTCTCCTTCTCGCTTCCTTTGGGCTCCACTGCTTTCTCTATCATTTGGCAGTGTAATAAAGCCAGCCAGCCAGCAGAAGCGAACGCTTTCTCTTCGTCCCATAACTACTGGTTTCTTCACTCGCTTTCACGGGGACTTTTCGGTTGATTGTATGGCTTCCAATGGTGCTTATCGGAATAGCGGCTCTCACAGAGGTTCTTTCAAGGTGGATCGGCCTCCTCATGCTGCTTCTAATCTCAGAACTTCGTCGTTTAAGGCTAGGCCCTCTATTCGTCGGTCTACTTCTGCGTCTTTTGGTTCAAATGCGAATAAGGATGCTGATGGAGTGCCAGGAAGAGTTCGAGTGGCTGTGAGATTGCGACCCCGAAATGCAGAAGAGCGGTTGGCAGATGCAGATTTTGCTGATTGTGTGGAACTGCAGCCAGAGCTTAAAAGATTGAAACTTAGAAAAAACAATTGGGATTCTGATACATATGAATTTGATGAGGTGCTTACTGAATCTGCATCACAGAAGCGTGTGTATGAAGTGGTTGCAAAACCAGTGGTGGAGCTCTATATGGAGACTCTACAAGATTTGCTTGATCCAGCAAATGACAATATTCCATTTGTGGAAGATCCAAAAACTGGTGATGTTTCCGTACCTGGGGCAACTGTAGTGGAAATCAGGAACCAAAGCAGCTTTCTAGAGTTACTACGTGTGGGGGAGGCCCATCGAGTTGCTGCCAATACAAAGTTGAATACAGAGTCTTCTCGTAGCCATGCAATTCTGATGGTGCTGTCAAATGAAGAGGGTGAACCTTCAGAGTTGGGTAGACCTTTCAGGCCACTTATTCGAAAGAGCAAGCTGGTGGTAGTGGATTTGGCAGGATCAGAGCGTATTCACAAGTCAGGGAGTGAGGGGCATCTGTTGGAGGAAGCTAAGTATATTAATCTATCACTTAGTGCTCTAGGAAAATGCATAAATGCTTTGGCAGAAAATAGTGCTCATGTTCCAATACGAGATTCCAAACTTACGAGATTGCTCAGAGATTCATTTGGAGGTTCAGCAAGAACTTCTTTGATTGTGACAATTGGTCCATCTCCACGCCATCGAGGAGAGACTTCTAGTACCATTCTGTTCGGCCAAAGGGCTATGAAGGTGGAGAATATGTTGAAAATAAAAGAAGAATTTGATTATAAAAGTTTGTCCAGGAAGCTTGAAGTACAGCTGGACAAACTGATTGCTGAAAATGAAAGACAACAGAAAGCTTTTGAAGATGAATTGGAAAAGATACATCTAGAAGCACAAAACCGCATATCTGAGGCTGAGAGAAATTTTGCTGATGCGTTGGAGAAGGAAAGTAAAAAATGCCAGCTGGATTATATGGAAACTGTCAAGAAATTGGAAGAGAAGTTGGTCTTGAACCAGCCAAAGATTGATCATGACGATTCTGTCCGTGACAAACGGAGTGGACAGGGGGGCTGTTTTTCTGCTGCTGAAGAAGTTGAAGTCAAAAAGTTGCTGGAAAATGAAGCAAACCTGAGAAAGGCAGCTGAAGAGGAGGTCAGCAGGCTTAGACATCAGCTAGAGCTATACAGGCAGCCAAATGTAGGTGATGAACCTGATACTGTAAAACTCACTAAATTAATGGAGGAGGAGGCTCTTCAGAAAAAGAAAATTGAAGAAGAAGTAATAATATTACGAAGCCAATTGTTGCAACTGACCCTCGAAGCTGAGCAGATGAGAAGGTGTCTTGATAGGGGTGGAGCTGAAAACGGATTTTCTGCTTATGATGCTCCTATGTCTCCATTTAGACATTCTCAACTCAAAGAAACAAAGAGCGGACACAAGCCATCAGTTGCCACTCTCTTTGAACAAGTTGGTTTGCAAAAAATCTTGTCCTTGCTGGACTCGGAAGATGCCAATGTACGAATTCATGCTGTTAAATCAAATCAAAAAAGGATCGTTGAGGCAGGTGGTCTTATTTCATTACTGATGCTTCTTAGAAGCTATGAGGATGAAACGGTTAGAAGAGTAGCAGCCGGTGCAATTGCCAACCTTGCTATGAATGAAGCCAATCAAGAACGAATAATGGCTGAAGGGGGAATCAGTCTACTGTCATTGACTGCCAATGCTGCTGAGGACCCACAGACTCTGCGCATGGTTGCTGGAGCCATTGCTAATTTATGTGGCAATGAAAAACTGCAGATGAAACTGAGATCTGAAGGTGGTTTAAAAGCCTTGCTGGGAATGGTGCGATGTGGACATCCAGATGTTCTTTCTCAGGTTGCTCATGGAGGTCTCCCTTGGATCATACAAAATGCAAACAATGAAGTGGCACCAATCCGTCGCCATATCGAGCTTGCTTTATGCCATTTAGCACAACATGAAGTAAATGCAAAGGAGATGATTAGTGGAGGTGCACTTTGGGAGTTAATTCGCATATCGCGCGACTGTTCCAGAGAGGATATACGGAATCTTGCTCGTCGAACACTGACTTCCAGTCCCCCTTGGATCGAAGAAGAACTTCCTATGATCATCACGGTTGCATCTCAATCTCTCTCTCTCTCTCAAGTCTTCCTGCTGAACGAAACCACAGATTATTGGCCATCTTTTTCTATCTTGTAA 2676 44.51 MEVLPAAGRFGRGRGPTDLRPSLSPSRFLWAPLLSLSFGSVIKPASQQKRTLSLRPITTGFFTRFHGDFSVDCMASNGAYRNSGSHRGSFKVDRPPHAASNLRTSSFKARPSIRRSTSASFGSNANKDADGVPGRVRVAVRLRPRNAEERLADADFADCVELQPELKRLKLRKNNWDSDTYEFDEVLTESASQKRVYEVVAKPVVELYMETLQDLLDPANDNIPFVEDPKTGDVSVPGATVVEIRNQSSFLELLRVGEAHRVAANTKLNTESSRSHAILMVLSNEEGEPSELGRPFRPLIRKSKLVVVDLAGSERIHKSGSEGHLLEEAKYINLSLSALGKCINALAENSAHVPIRDSKLTRLLRDSFGGSARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDELEKIHLEAQNRISEAERNFADALEKESKKCQLDYMETVKKLEEKLVLNQPKIDHDDSVRDKRSGQGGCFSAAEEVEVKKLLENEANLRKAAEEEVSRLRHQLELYRQPNVGDEPDTVKLTKLMEEEALQKKKIEEEVIILRSQLLQLTLEAEQMRRCLDRGGAENGFSAYDAPMSPFRHSQLKETKSGHKPSVATLFEQVGLQKILSLLDSEDANVRIHAVKSNQKRIVEAGGLISLLMLLRSYEDETVRRVAAGAIANLAMNEANQERIMAEGGISLLSLTANAAEDPQTLRMVAGAIANLCGNEKLQMKLRSEGGLKALLGMVRCGHPDVLSQVAHGGLPWIIQNANNEVAPIRRHIELALCHLAQHEVNAKEMISGGALWELIRISRDCSREDIRNLARRTLTSSPPWIEEELPMIITVASQSLSLSQVFLLNETTDYWPSFSIL 891
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3167704 3179699 - Cp4.1LG08g01900.1 Cpe08g00491 473457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00491 891 MobiDBLite consensus disorder prediction 109 128 - -
Cpe08g00491 891 ProSiteProfiles Kinesin motor domain profile. 205 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 PANTHER KINESIN-LIKE PROTEIN KIN-UB 207 762 - -
Cpe08g00491 891 PANTHER KINESIN-RELATED 117 206 IPR027640 GO:0003777|GO:0007018
Cpe08g00491 891 PANTHER KINESIN-RELATED 207 762 IPR027640 GO:0003777|GO:0007018
Cpe08g00491 891 Coils Coil 524 544 - -
Cpe08g00491 891 PANTHER KINESIN-LIKE PROTEIN KIN-UB 117 206 - -
Cpe08g00491 891 PANTHER KINESIN-LIKE PROTEIN KIN-UB 788 857 - -
Cpe08g00491 891 SUPERFAMILY ARM repeat 632 849 IPR016024 -
Cpe08g00491 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 438 IPR027417 -
Cpe08g00491 891 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 675 718 IPR000225 GO:0005515
Cpe08g00491 891 Pfam Kinesin motor domain 204 403 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 Pfam Armadillo/beta-catenin-like repeat 667 704 IPR000225 GO:0005515
Cpe08g00491 891 PRINTS Kinesin heavy chain signature 266 283 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 PRINTS Kinesin heavy chain signature 304 322 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 PRINTS Kinesin heavy chain signature 353 374 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 ProSiteProfiles Kinesin motor domain profile. 135 204 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 Gene3D Kinesin motor domain 128 205 IPR036961 -
Cpe08g00491 891 SMART kinesin_4 133 411 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cpe08g00491 891 ProSitePatterns Kinesin motor domain signature. 303 314 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cpe08g00491 891 Gene3D Kinesin motor domain 206 432 IPR036961 -
Cpe08g00491 891 Gene3D - 515 853 IPR011989 -
Cpe08g00491 891 Coils Coil 419 468 - -
Cpe08g00491 891 PANTHER KINESIN-RELATED 788 857 IPR027640 GO:0003777|GO:0007018
Cpe08g00491 891 SMART arm_5 663 705 IPR000225 GO:0005515
Cpe08g00491 891 SMART arm_5 706 747 IPR000225 GO:0005515
Cpe08g00491 891 Coils Coil 566 593 - -
Cpe08g00491 891 MobiDBLite consensus disorder prediction 109 125 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00491 K10396 KIF5; kinesin family member 5 - csv:101212194 1128.62
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Cpe05g00275 Cpe08g00491 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00275 Cpe-Chr5:1532983 Cpe08g00491 Cpe-Chr8:3167704 0 dispersed
Cpe08g00491 Cpe-Chr8:3167704 Cpe13g00756 Cpe-Chr13:6912806 1.42E-76 dispersed
Cpe13g00198 Cpe-Chr13:1523221 Cpe08g00491 Cpe-Chr8:3167704 0 wgd
Cpe03g01686 Cpe-Chr3:12839084 Cpe08g00491 Cpe-Chr8:3167704 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi2g461 . . . . . Bpe07g00141 . . Cmo06g01154 . . . . . . . Cpe05g00275 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bma12g00119 . . . Cma06g01129 . Car06g00965 . Cpe08g00491 . Bhi12g00356 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001054 3 5 3 2 3 2 5 2 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 2 2 2 2 5 2 3 80
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe08g00491 Cpe_Chr08 FPKM 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0