Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00495 ATGGAGACCAATCCCGCCGCCGCCGTCGTCGTCGACGTTAGCAGTACCCCAAGCGTTCCGCCGGAGAAACGGAACCGTTCTATCTTCAACGTCCCGCCGGACTTCTTCGCTTCCTGCAAACTCCTTCGTTCTCCACATTCATACACCTCATCAACCAGCGGCAGCTGCTACAGCTCAAGCGCAGAAAATCCAGTCGATTCGGAGCAGAATTCTAGGGATTTCAAAGAAACTTCCGTTGCCCAAAGATGGACCTGCAACACATGCAAGGCCGAGTTCGAATCCCTCCTCGACCAGCGTTCGCACTTCAAATCCGACCTTCACCGATTCAATGTGAAGCTAAGCATTGCTGGAAAGAATATTGTGAAGGAGGATGATTTTGATGAGCTGACATCTGATTCTTTCAGAGACTTTGATGTGTCAAGTATTTCTGGATCAGAGGATGAAACAGAGAAGGAGATTTACTCTCGGAATGAAGGGTCTAAGGGAACAATTGATAGCGTGAACAAGAAGAAGTTGTTCGTTCATCTTCAAACAGGTGAAAGAGTTTCGGTTTGGAAGTGTTTGCTCATAAATGAGTCAGATAGTATTTCGTATGAGGATGATAAAACATCGGTCGGCGGTAATGGTATTCATTCACAATATCTTAGAGAGAATGAAGTCATAGCGAGATTGAAATATCTAAATCACGAGCCAAGAGATGGCACCCATTTGAGGATAGTGTTGCTTGCAAGTGGTGGGCACTTCGCCGGTTGTGTTTTCGACGGGAACTCGGTTGTAGCTCATAAAACCTTTCACAGATATGTAGTGAGAGCCAAGTCTGGAAAGAAGCAGTCATCGAAAGATGCAAGTGGCAAAACAATCAGTTCGGCCGGGGCTTCACTTCGTCGTCATAATGAACTCGCGTTGAAGAAGGAAATTCAAGATCTCCTAGCTGCTTGGAAGTCCTATTTTAATGCTTCTTCTTGCGTTTATATTTATGCTCCTTCAAACAACCGGCAATTACTTTTTAATGGGGATAAGCCATATTTTAGCGATCAGCGTTCTGCTGTTCGGAATATTCCTTTGACTGTTCGAAGGCCTACGTTAAAAGAAGCTCGACGTGTTTATGAACAATTGGTGCAAGTAGCATATGAAGTAGAAGATAAGGAAGTATTGTCCACCAATGAGCACAATTCATCATCAAGTGTAGTTACAACAGACAATGGCACCCAAGATATTGGTGAACCGAAGGTTATTGGAGACTTGGAAAAGGATGCTTGTACACATCTTGAAGAACCTGTTGAACATCCAATAACTAGAGAGAGTGAAAGTGAAAGTATTTGTATAACTACACCTCTGCATGAAGCATCACAGACTGGAAATGCAGATAAGGTTTTGGAACTCCTTGAACAGGGTCTTGATCCTTGCGCCAAAGACGAACGAGGACGGACTCCTTACATGCTAGCAACTGAAAAGGAAGTCCGAAATAGCTTCAGAAGGTTCATGGCTTCAAACCTTGATAAGTGGGATTGGAATGCTGCTAAAGTTCCGAGCGCGCTAACCAAGGAAATGGAGGAATCACAAGCTGCTAAGCAGGCCGAAAAAGATGCCAAGCGAAAGGCACGAGCGAAGGAATTGAAGAAGTTAAAGAAAGAAAAGGCCAAGAAAGCACAGGCCGAGGCCGAGGCTGCTGAATCTCAAAAAGCTGCGAAGGCGGAACACGGCAGAGGAATCGGCTCTATTTTGAATACTCGAGCTGAATCAACCAGTGGAAAACTGATTACCAAAGAGATGGTACAGGCTGCCGAGCGCGAAAAGAGAGCAGCAGCTGCCGAGAGAAGAATCGCAGCCATGGCTGCAACTGCAGCCACCAATGGTTCATCGTCGACTATTCCGAACAGCTCACAGACTAAAACCGGGGTAGCCGGGGACATCAACTGTTCCTGTTGTGGTACGTCGCTAGCTGGTAAGGTTCCTTTCCACCGGTACAACTATAAATATTGTAGCTCAACATGCATGCATGTACACAAAGAGGTCCTTGAGGAAAACTAG 2031 45.64 METNPAAAVVVDVSSTPSVPPEKRNRSIFNVPPDFFASCKLLRSPHSYTSSTSGSCYSSSAENPVDSEQNSRDFKETSVAQRWTCNTCKAEFESLLDQRSHFKSDLHRFNVKLSIAGKNIVKEDDFDELTSDSFRDFDVSSISGSEDETEKEIYSRNEGSKGTIDSVNKKKLFVHLQTGERVSVWKCLLINESDSISYEDDKTSVGGNGIHSQYLRENEVIARLKYLNHEPRDGTHLRIVLLASGGHFAGCVFDGNSVVAHKTFHRYVVRAKSGKKQSSKDASGKTISSAGASLRRHNELALKKEIQDLLAAWKSYFNASSCVYIYAPSNNRQLLFNGDKPYFSDQRSAVRNIPLTVRRPTLKEARRVYEQLVQVAYEVEDKEVLSTNEHNSSSSVVTTDNGTQDIGEPKVIGDLEKDACTHLEEPVEHPITRESESESICITTPLHEASQTGNADKVLELLEQGLDPCAKDERGRTPYMLATEKEVRNSFRRFMASNLDKWDWNAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLKKEKAKKAQAEAEAAESQKAAKAEHGRGIGSILNTRAESTSGKLITKEMVQAAEREKRAAAAERRIAAMAATAATNGSSSTIPNSSQTKTGVAGDINCSCCGTSLAGKVPFHRYNYKYCSSTCMHVHKEVLEEN 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3198555 3203078 - Cp4.1LG08g01740.1 Cpe08g00495 473461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00495 676 MobiDBLite consensus disorder prediction 545 565 - -
Cpe08g00495 676 MobiDBLite consensus disorder prediction 49 73 - -
Cpe08g00495 676 Gene3D - 437 559 IPR036770 -
Cpe08g00495 676 ProSitePatterns Zinc finger C2H2 type domain signature. 85 107 IPR013087 -
Cpe08g00495 676 MobiDBLite consensus disorder prediction 388 405 - -
Cpe08g00495 676 Coils Coil 517 567 - -
Cpe08g00495 676 MobiDBLite consensus disorder prediction 515 574 - -
Cpe08g00495 676 Pfam Vms1-associating treble clef domain 638 671 IPR041540 -
Cpe08g00495 676 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 22 672 - -
Cpe08g00495 676 ProSiteProfiles Ankyrin repeat profile. 444 473 IPR002110 GO:0005515
Cpe08g00495 676 MobiDBLite consensus disorder prediction 49 67 - -
Cpe08g00495 676 SUPERFAMILY Ankyrin repeat 444 496 IPR036770 -
Cpe08g00495 676 Pfam Bacteroidetes VLRF1 release factor 239 377 IPR041175 -
Cpe08g00495 676 MobiDBLite consensus disorder prediction 520 534 - -
Cpe08g00495 676 MobiDBLite consensus disorder prediction 386 406 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00495 K26089 - csv:101216211 989.178