Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00524 ATGAGGACTGTGATTGCCGGAGCTTTGTTTTCCCTCCAACTCTCTGCCGCAGACATCTCTCCATTGTTTTATCAGCCTCCAGCACCGGGCTTGTCTCATATTCCTGGAACCATGGATTTATCTTGTAATATTTGGAAGCAAAATGTGTTATCTGGTAGTGAAAAAGCATATTGCAAGACGTTGGACCAATTTGGTCCCAGCTATGTGCTTAGAAGTAGAATTATTGATGCCAAGTTGACTGGAGGTTCAAGAGTAATTTATAAAGTGCCGAAGAAGAGAAACAGAATTGTAGCTGCTAGCAATTCCAATCATTTGAGTCGGGTTTGTGCTAGCAAGTATGTTGGTGCCTTGCAAATATGTAAGCACAAAAGATTCTTGAATTGTAACAACACATTTGGAAGAAGGATGGGCATGGTTTATTCAGAGTGTCTAAGCAATGATTCTTCATCATTTATTGATGGAAATGGCAGAAATTTGGAATATGTGGGTACTGGTGATGGAGGATCCAGTTCTGAGCATACCGATGGTTTAGGGTCAGCTAGTTCCAGAGAAGCTGGTGGAGAAGCAGAAGCTGTAGAAACGGATGCACTGACTGTGGATGAGCTTAGAGAATTGCTGCAAAAGGCTATGACAGAATTGGAAGTTGCGAGACTTAACAGTACCATGTTTGAGGAAAAAGCCCAAAAAATATCAGAAGCAGCGATAGCTTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAATTCTGCTCTTGATTCTGTACAACAGATCGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCACTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATAGAGTCATTGGAGCTGGCAAAAGGAAACGATTCTCCTGAAACATCAACAGAAAGTGAGGGGGAGATTGATGGCAAGGAAAAGCAAGAAGTGTTGTTAGTGGCTCAGGAGGACATCAAAGAATGCTGTGCTAATTTGGAAACTTGTGATGCGGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGCTGACTGAGTTAGCTGAAAAAGAACAATTGATTGCGTTGAAAGCTGAAGAAGAAGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAATTTTACAGAGAGTGGAGAAATCTATATCAAATTCTTTTGTGTCAAATATTATTGAAGAAGTTGCTAACGAGGACAATAAGGCAGTTCTCGAAATTTCTGGTGATATTGCTGTTGAAATAGATAGAGATTTGCCACTTAGTGGTAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATGACTTAAGTGATAGCGAGAATGGAAAATTGAATTCAGATTCCTTAAAGGAGGTAGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCATCTTTAAATTCCCCCAAGGCTTTATTGAAAAAATCTTCTCGCTTTTTCTCAGCGTCATTCTTTTCTTTTTCGGCTGATGGGGAAGAGTTCACTCCAGCATTAGTCTTCCAGGGTCTCCTGGATTCCACGAAAAAGCAATTGCCAAAGCTTATTGTTGGAGTAGTACTGTTAGGAGCAGGTTTAGCAAGCGTATTTCATCTTCCTAATGAGGGTATTGCACCAGTATTCTCCTTCCCCAGGAATCTTAGAAAGAAGAGATTTTTGCGTCCGTCACTAGATGTTGAAATTCATCACAGGATCAGCATCTTTGCAAATCGAGCAGGAAGGAAGTCTCATATGTTTCAGCAGCCTGATGTTGTCACCACTAGCACTGATGAAGTTTCCTGGAATACAAAACCTTTATTTCAACAATTAAGTAAACTTCCTCAAAAAGTGAATGAAGAGGAGGCTTCACTGTTAGACATGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTGCCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGAATATTAATTGGGCCATATGGTCTCTCCATAATCCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGTTATCAGTTGAGAGGCTAAGCTCCATGAAGAAATATGTTTTTGGGTTAGGATCTGCACAGGTTTTGGTTACAGCTGTGGTGGTTGGCATGATTGCTCATATTGTCTGTGGGCAGCCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTAGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGCGAGAGCACTTCGCGGCATGGGCGAGCCACATTTTCTGTCTTACTATTTCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTACCATTATAGCTGGTGGGCGCCTGCTACTACGACCAATATATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTACTTGTCATTCTGGGAACAAGTTTACTTACTGCCAGGGCTGGACTATCAATGGCGCTAGGTGCCTTTCTAGCAGGTTTACTACTTGCAGAAACGGAATTCTCCTTGCAGGTCGAATCTGATATTGCTCCCTATCGTGGCCTTCTATTGGGTCTCTTTTTCATGACGTTATCATGGGGTCTTTGGGACTTCTTATTGGTGGGTATAATGTCTTCTCAACTATCCTCTTTACTGTTTCTTGTTGTGGGAATTTCTATGGCCCTTACGCCGTGGCTAGCTGCTGGTGGTCAGTTAATTGCTTCTCATTTTGAGCAACATGATGTTCGGAGCTTATTACCTGTTGAAAGCGAGACTGATGATTTACAAGATCATATCATTCTTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTACGAAGCGATAGAGTGGCTGTTGGACGTGCCCTGGACCTTCCCGTGTATTTTGGAGATGCTGGAAGTCGAGAGGTTCTTCATAAAATTGGTGCTGAAAGGGCATGTGCTGCTGCAATTACACTGGATTCACCGGGTGCAAATTACAGAACCGTTTGGGCTCTAAACAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTTAATTTGGAGAAGGCTGGGGCAACTGCGGTGGTTCCTGAGACGTTGGAACCAAGCTTACAGTTGGCTGCTGCCGCTAAACTACCCATGTCGGAGATTGCTGCAACGATCAACGAGTTTAGATCCCGACATTTATCCGAGCTTACCGAGCTATCTGAAGCCAGTGGAAGTTCACTTGGGTACGGGTTTTCTCGAATCATGAGTAAACCGAAAATTCAAACCTCTGATCCTTCGGATGAGAACCAAGTCACCGAAGGAACACTCACAATATGA 3594 42.85 MRTVIAGALFSLQLSAADISPLFYQPPAPGLSHIPGTMDLSCNIWKQNVLSGSEKAYCKTLDQFGPSYVLRSRIIDAKLTGGSRVIYKVPKKRNRIVAASNSNHLSRVCASKYVGALQICKHKRFLNCNNTFGRRMGMVYSECLSNDSSSFIDGNGRNLEYVGTGDGGSSSEHTDGLGSASSREAGGEAEAVETDALTVDELRELLQKAMTELEVARLNSTMFEEKAQKISEAAIALQDEAAHAWNDVNSALDSVQQIVNEEYAAKEAVQKATMALSLAEARLQVAIESLELAKGNDSPETSTESEGEIDGKEKQEVLLVAQEDIKECCANLETCDAELKRLQSKKEELQKEVDRLTELAEKEQLIALKAEEEVANIMLLAEQAVAFELEAAQRVSDAEIILQRVEKSISNSFVSNIIEEVANEDNKAVLEISGDIAVEIDRDLPLSGSFSDSEDSDQPYDLSDSENGKLNSDSLKEVESGAEKSILSQAKKQETQKDLTREGSSLNSPKALLKKSSRFFSASFFSFSADGEEFTPALVFQGLLDSTKKQLPKLIVGVVLLGAGLASVFHLPNEGIAPVFSFPRNLRKKRFLRPSLDVEIHHRISIFANRAGRKSHMFQQPDVVTTSTDEVSWNTKPLFQQLSKLPQKVNEEEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGMIAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISTIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTLSWGLWDFLLVGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASHFEQHDVRSLLPVESETDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALNKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAAKLPMSEIAATINEFRSRHLSELTELSEASGSSLGYGFSRIMSKPKIQTSDPSDENQVTEGTLTI 1197
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 3388541 3402489 - Cp4.1LG08g01580.1 Cpe08g00524 473490
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00524 1197 MobiDBLite consensus disorder prediction 1177 1197 - -
Cpe08g00524 1197 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 663 937 IPR004771 GO:0006812|GO:0008324|GO:0016021
Cpe08g00524 1197 MobiDBLite consensus disorder prediction 486 505 - -
Cpe08g00524 1197 Coils Coil 199 219 - -
Cpe08g00524 1197 MobiDBLite consensus disorder prediction 162 192 - -
Cpe08g00524 1197 MobiDBLite consensus disorder prediction 164 178 - -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 604 939 - -
Cpe08g00524 1197 Gene3D - 652 981 IPR038770 -
Cpe08g00524 1197 ProSiteProfiles RCK N-terminal domain profile. 1005 1127 IPR003148 GO:0006813
Cpe08g00524 1197 Pfam Sodium/hydrogen exchanger family 662 940 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe08g00524 1197 Pfam TrkA-N domain 1006 1119 IPR003148 GO:0006813
Cpe08g00524 1197 Coils Coil 325 373 - -
Cpe08g00524 1197 MobiDBLite consensus disorder prediction 447 475 - -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 949 1197 - -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 38 568 - -
Cpe08g00524 1197 Gene3D - 1001 1161 - -
Cpe08g00524 1197 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1002 1136 IPR036291 -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 949 1197 - -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 604 939 - -
Cpe08g00524 1197 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 38 568 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Cpe03g01717 Cpe08g00524 CST
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g00356 Cpe-Chr4:4207737 Cpe08g00524 Cpe-Chr8:3388541 3.00E-69 dispersed
Cpe08g00524 Cpe-Chr8:3388541 Cpe15g00398 Cpe-Chr15:5172010 3.05E-67 dispersed
Cpe03g01717 Cpe-Chr3:13023869 Cpe08g00524 Cpe-Chr8:3388541 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00524 - - cmo:103483290 1671.37