Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00524 | ATGAGGACTGTGATTGCCGGAGCTTTGTTTTCCCTCCAACTCTCTGCCGCAGACATCTCTCCATTGTTTTATCAGCCTCCAGCACCGGGCTTGTCTCATATTCCTGGAACCATGGATTTATCTTGTAATATTTGGAAGCAAAATGTGTTATCTGGTAGTGAAAAAGCATATTGCAAGACGTTGGACCAATTTGGTCCCAGCTATGTGCTTAGAAGTAGAATTATTGATGCCAAGTTGACTGGAGGTTCAAGAGTAATTTATAAAGTGCCGAAGAAGAGAAACAGAATTGTAGCTGCTAGCAATTCCAATCATTTGAGTCGGGTTTGTGCTAGCAAGTATGTTGGTGCCTTGCAAATATGTAAGCACAAAAGATTCTTGAATTGTAACAACACATTTGGAAGAAGGATGGGCATGGTTTATTCAGAGTGTCTAAGCAATGATTCTTCATCATTTATTGATGGAAATGGCAGAAATTTGGAATATGTGGGTACTGGTGATGGAGGATCCAGTTCTGAGCATACCGATGGTTTAGGGTCAGCTAGTTCCAGAGAAGCTGGTGGAGAAGCAGAAGCTGTAGAAACGGATGCACTGACTGTGGATGAGCTTAGAGAATTGCTGCAAAAGGCTATGACAGAATTGGAAGTTGCGAGACTTAACAGTACCATGTTTGAGGAAAAAGCCCAAAAAATATCAGAAGCAGCGATAGCTTTGCAAGATGAAGCAGCCCATGCTTGGAATGATGTGAATTCTGCTCTTGATTCTGTACAACAGATCGTGAATGAAGAATATGCTGCCAAAGAAGCTGTTCAAAAAGCAACCATGGCACTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAATAGAGTCATTGGAGCTGGCAAAAGGAAACGATTCTCCTGAAACATCAACAGAAAGTGAGGGGGAGATTGATGGCAAGGAAAAGCAAGAAGTGTTGTTAGTGGCTCAGGAGGACATCAAAGAATGCTGTGCTAATTTGGAAACTTGTGATGCGGAATTGAAGCGCTTACAGAGTAAAAAGGAAGAGTTACAGAAGGAAGTGGACAGGCTGACTGAGTTAGCTGAAAAAGAACAATTGATTGCGTTGAAAGCTGAAGAAGAAGTGGCAAATATAATGCTTTTGGCTGAGCAAGCTGTTGCTTTTGAACTTGAGGCTGCCCAAAGGGTCAGTGATGCTGAAATAATTTTACAGAGAGTGGAGAAATCTATATCAAATTCTTTTGTGTCAAATATTATTGAAGAAGTTGCTAACGAGGACAATAAGGCAGTTCTCGAAATTTCTGGTGATATTGCTGTTGAAATAGATAGAGATTTGCCACTTAGTGGTAGCTTTTCAGATTCTGAAGACTCTGATCAACCATATGACTTAAGTGATAGCGAGAATGGAAAATTGAATTCAGATTCCTTAAAGGAGGTAGAATCTGGAGCAGAGAAGTCTATTTTGAGTCAAGCAAAAAAGCAGGAAACACAGAAGGATTTGACCAGAGAAGGCTCATCTTTAAATTCCCCCAAGGCTTTATTGAAAAAATCTTCTCGCTTTTTCTCAGCGTCATTCTTTTCTTTTTCGGCTGATGGGGAAGAGTTCACTCCAGCATTAGTCTTCCAGGGTCTCCTGGATTCCACGAAAAAGCAATTGCCAAAGCTTATTGTTGGAGTAGTACTGTTAGGAGCAGGTTTAGCAAGCGTATTTCATCTTCCTAATGAGGGTATTGCACCAGTATTCTCCTTCCCCAGGAATCTTAGAAAGAAGAGATTTTTGCGTCCGTCACTAGATGTTGAAATTCATCACAGGATCAGCATCTTTGCAAATCGAGCAGGAAGGAAGTCTCATATGTTTCAGCAGCCTGATGTTGTCACCACTAGCACTGATGAAGTTTCCTGGAATACAAAACCTTTATTTCAACAATTAAGTAAACTTCCTCAAAAAGTGAATGAAGAGGAGGCTTCACTGTTAGACATGTTATGGCTGTTGCTTGCTAGTGTTATATTTGTGCCAACATTTCAGAAACTTCCTGGAGGAAGTCCTGTCCTTGGGTACTTGGCTGCTGGAATATTAATTGGGCCATATGGTCTCTCCATAATCCGTCATGTGCATGGAACAAAAGCAATTGCTGAATTTGGAGTTGTTTTTCTCCTGTTCAACATTGGCCTGGAGTTATCAGTTGAGAGGCTAAGCTCCATGAAGAAATATGTTTTTGGGTTAGGATCTGCACAGGTTTTGGTTACAGCTGTGGTGGTTGGCATGATTGCTCATATTGTCTGTGGGCAGCCTGGCCCAGCTGCAATTGTCATTGGAAATGGTTTAGCTTTGTCATCCACTGCTGTTGTCCTTCAGGTGTTGCAAGAGCGAGGCGAGAGCACTTCGCGGCATGGGCGAGCCACATTTTCTGTCTTACTATTTCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTCATACCTCTAATTTCACCTAATTCATCCAAAGGAGGGATTGGTTTTCAAGCCATTGCTGAAGCTCTTGGCCTGGCTGCTGTTAAGGCAATAGTTGCCATTTCTACCATTATAGCTGGTGGGCGCCTGCTACTACGACCAATATATAAACAAATAGCTGAAAATCAAAATGCAGAAATATTCTCTGCCAACACACTACTTGTCATTCTGGGAACAAGTTTACTTACTGCCAGGGCTGGACTATCAATGGCGCTAGGTGCCTTTCTAGCAGGTTTACTACTTGCAGAAACGGAATTCTCCTTGCAGGTCGAATCTGATATTGCTCCCTATCGTGGCCTTCTATTGGGTCTCTTTTTCATGACGTTATCATGGGGTCTTTGGGACTTCTTATTGGTGGGTATAATGTCTTCTCAACTATCCTCTTTACTGTTTCTTGTTGTGGGAATTTCTATGGCCCTTACGCCGTGGCTAGCTGCTGGTGGTCAGTTAATTGCTTCTCATTTTGAGCAACATGATGTTCGGAGCTTATTACCTGTTGAAAGCGAGACTGATGATTTACAAGATCATATCATTCTTTGTGGATTTGGACGAGTTGGTCAGATAATAGCCCAGCTTCTGTCAGAGCGACTGATTCCTTTTGTTGCCCTTGATGTACGAAGCGATAGAGTGGCTGTTGGACGTGCCCTGGACCTTCCCGTGTATTTTGGAGATGCTGGAAGTCGAGAGGTTCTTCATAAAATTGGTGCTGAAAGGGCATGTGCTGCTGCAATTACACTGGATTCACCGGGTGCAAATTACAGAACCGTTTGGGCTCTAAACAAGTATTTCCCTAATGTTAAGACTTTTGTTCGAGCTCATGATGTTGATCATGGCCTTAATTTGGAGAAGGCTGGGGCAACTGCGGTGGTTCCTGAGACGTTGGAACCAAGCTTACAGTTGGCTGCTGCCGCTAAACTACCCATGTCGGAGATTGCTGCAACGATCAACGAGTTTAGATCCCGACATTTATCCGAGCTTACCGAGCTATCTGAAGCCAGTGGAAGTTCACTTGGGTACGGGTTTTCTCGAATCATGAGTAAACCGAAAATTCAAACCTCTGATCCTTCGGATGAGAACCAAGTCACCGAAGGAACACTCACAATATGA | 3594 | 42.85 | MRTVIAGALFSLQLSAADISPLFYQPPAPGLSHIPGTMDLSCNIWKQNVLSGSEKAYCKTLDQFGPSYVLRSRIIDAKLTGGSRVIYKVPKKRNRIVAASNSNHLSRVCASKYVGALQICKHKRFLNCNNTFGRRMGMVYSECLSNDSSSFIDGNGRNLEYVGTGDGGSSSEHTDGLGSASSREAGGEAEAVETDALTVDELRELLQKAMTELEVARLNSTMFEEKAQKISEAAIALQDEAAHAWNDVNSALDSVQQIVNEEYAAKEAVQKATMALSLAEARLQVAIESLELAKGNDSPETSTESEGEIDGKEKQEVLLVAQEDIKECCANLETCDAELKRLQSKKEELQKEVDRLTELAEKEQLIALKAEEEVANIMLLAEQAVAFELEAAQRVSDAEIILQRVEKSISNSFVSNIIEEVANEDNKAVLEISGDIAVEIDRDLPLSGSFSDSEDSDQPYDLSDSENGKLNSDSLKEVESGAEKSILSQAKKQETQKDLTREGSSLNSPKALLKKSSRFFSASFFSFSADGEEFTPALVFQGLLDSTKKQLPKLIVGVVLLGAGLASVFHLPNEGIAPVFSFPRNLRKKRFLRPSLDVEIHHRISIFANRAGRKSHMFQQPDVVTTSTDEVSWNTKPLFQQLSKLPQKVNEEEASLLDMLWLLLASVIFVPTFQKLPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSVERLSSMKKYVFGLGSAQVLVTAVVVGMIAHIVCGQPGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGIGFQAIAEALGLAAVKAIVAISTIIAGGRLLLRPIYKQIAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTLSWGLWDFLLVGIMSSQLSSLLFLVVGISMALTPWLAAGGQLIASHFEQHDVRSLLPVESETDDLQDHIILCGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKIGAERACAAAITLDSPGANYRTVWALNKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAAKLPMSEIAATINEFRSRHLSELTELSEASGSSLGYGFSRIMSKPKIQTSDPSDENQVTEGTLTI | 1197 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3388541 | 3402489 | - | Cp4.1LG08g01580.1 | Cpe08g00524 | 473490 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00524 | 1197 | MobiDBLite | consensus disorder prediction | 1177 | 1197 | - | - | |
Cpe08g00524 | 1197 | TIGRFAM | 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family | 663 | 937 | IPR004771 | GO:0006812|GO:0008324|GO:0016021 | |
Cpe08g00524 | 1197 | MobiDBLite | consensus disorder prediction | 486 | 505 | - | - | |
Cpe08g00524 | 1197 | Coils | Coil | 199 | 219 | - | - | |
Cpe08g00524 | 1197 | MobiDBLite | consensus disorder prediction | 162 | 192 | - | - | |
Cpe08g00524 | 1197 | MobiDBLite | consensus disorder prediction | 164 | 178 | - | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 604 | 939 | - | - | |
Cpe08g00524 | 1197 | Gene3D | - | 652 | 981 | IPR038770 | - | |
Cpe08g00524 | 1197 | ProSiteProfiles | RCK N-terminal domain profile. | 1005 | 1127 | IPR003148 | GO:0006813 | |
Cpe08g00524 | 1197 | Pfam | Sodium/hydrogen exchanger family | 662 | 940 | IPR006153 | GO:0006812|GO:0015299|GO:0016021|GO:0055085 | |
Cpe08g00524 | 1197 | Pfam | TrkA-N domain | 1006 | 1119 | IPR003148 | GO:0006813 | |
Cpe08g00524 | 1197 | Coils | Coil | 325 | 373 | - | - | |
Cpe08g00524 | 1197 | MobiDBLite | consensus disorder prediction | 447 | 475 | - | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 949 | 1197 | - | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC | 38 | 568 | - | - | |
Cpe08g00524 | 1197 | Gene3D | - | 1001 | 1161 | - | - | |
Cpe08g00524 | 1197 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 1002 | 1136 | IPR036291 | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED | 949 | 1197 | - | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED | 604 | 939 | - | - | |
Cpe08g00524 | 1197 | PANTHER | K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED | 38 | 568 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01717 | Cpe08g00524 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00356 | Cpe-Chr4:4207737 | Cpe08g00524 | Cpe-Chr8:3388541 | 3.00E-69 | dispersed | |
Cpe08g00524 | Cpe-Chr8:3388541 | Cpe15g00398 | Cpe-Chr15:5172010 | 3.05E-67 | dispersed | |
Cpe03g01717 | Cpe-Chr3:13023869 | Cpe08g00524 | Cpe-Chr8:3388541 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00524 | - | - | cmo:103483290 | 1671.37 |