Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00531 ATGGAAATGGAAGTTGATTGGGATCTTCACGCCGTCGTTAGAGGCTACTCCGCCATGACCTCCGCCGCCGCCTCCTCCTCCGCCGTCTCCTCCGCCGCTGTTCCTTCTTCCGACTCTTACTCTGTTTCTTCCAATTCTAATAACTCTGTTTCTATGGCGTTTGGCAGAGACCAAACGAACCGTATGTTGTCGCTTCAAGATCCATTTGATGGGTCGAATTGTAATTCTACTGAGGAATTGCAGGAGTTTTTTAACCCCTTTTTACCTAAATCTCAACGCTCTCCTCCACTGCCGCCGCCGCCTGCTCCGCCGCTTCTTTCTTCTCCGGCGGTCAAAATTCTGACCCATCAGAAGCAACTACAGAACACCCATCTTCCTAAACAGCTCCATTCAACCTCCGTTTCTGCTCCGAGATCCAAACGCCGGAAGAACCAGTTGAAGAAAGTCTGTCAAGTTCCGGCGGAGGCTCTGTCGTCGGACATTTGGGCTTGGAGAAAATATGGACAAAAACCCATCAAGGGATCTCCATATCCAAGGGGATATTACAGATGTAGCAGTTCAAAGGGTTGCATGGCCCGGAAACAAGTGGAGAGGAACAGATCCGATCCGGGAATGTTCATAGTTACTTACACGGCGGAGCACAACCACCCGGCGCCAACTCATCGGAATTCCCTCGCCGGCTCAACCCGTCAGAAGGCCAACACGCCGACACCCACCGACGCCGGATCGGAAAAACCCGATGCGAAACATCTCGTTTGCTCGTCCGAAGATCTGAGTACGATCACGGAGAGCAAAGAAGAAGAGAAAGAGGAATCATTGGCGGAAGACGAAGAAGACAACGATCTGGGGATCTCTGATTTAATCGTCAACGACGATTTCTACGTGGGGTTTGAAGAACTCGACAGTCCTAACGCCGACGACTGCTTTTCCGATGATTTTCCGGCGAGTTTTGGACTTCCATGGCTGTTTAACAATGCTCCAACCGCCACTAGCAGCATTTAA 1002 50.9 MEMEVDWDLHAVVRGYSAMTSAAASSSAVSSAAVPSSDSYSVSSNSNNSVSMAFGRDQTNRMLSLQDPFDGSNCNSTEELQEFFNPFLPKSQRSPPLPPPPAPPLLSSPAVKILTHQKQLQNTHLPKQLHSTSVSAPRSKRRKNQLKKVCQVPAEALSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCMARKQVERNRSDPGMFIVTYTAEHNHPAPTHRNSLAGSTRQKANTPTPTDAGSEKPDAKHLVCSSEDLSTITESKEEEKEESLAEDEEDNDLGISDLIVNDDFYVGFEELDSPNADDCFSDDFPASFGLPWLFNNAPTATSSI 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 3446773 3448535 - Cp4.1LG08g01440.1 Cpe08g00531 473497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00531 333 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 320 IPR044810 GO:0003700
Cpe08g00531 333 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 3 320 - -
Cpe08g00531 333 SUPERFAMILY WRKY DNA-binding domain 156 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe08g00531 333 SMART WRKY_cls 158 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00531 333 MobiDBLite consensus disorder prediction 216 241 - -
Cpe08g00531 333 Gene3D WRKY domain 142 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cpe08g00531 333 Pfam WRKY DNA -binding domain 160 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00531 333 MobiDBLite consensus disorder prediction 126 146 - -
Cpe08g00531 333 ProSiteProfiles WRKY domain profile. 153 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cpe08g00531 333 MobiDBLite consensus disorder prediction 213 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00650 Cpe-Chr1:3762476 Cpe08g00531 Cpe-Chr8:3446773 2.95E-38 dispersed
Cpe05g00637 Cpe-Chr5:3893194 Cpe08g00531 Cpe-Chr8:3446773 4.96E-52 dispersed
Cpe08g00531 Cpe-Chr8:3446773 Cpe13g00277 Cpe-Chr13:2202479 6.09E-50 dispersed
Cpe02g01525 Cpe-Chr2:12993881 Cpe08g00531 Cpe-Chr8:3446773 6.26E-34 transposed
Cpe03g01751 Cpe-Chr3:13267612 Cpe08g00531 Cpe-Chr8:3446773 9.07E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49851 PF03106 WRKY 4.40E-25 CL0274 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00531 K13425 - csv:101217082 446.432