Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00597 | ATGGTTAGAGGAGGAGGAGGAGGGGAGGAGGAGGAGGAGGGGAGGAGGAGCGGCAGAGCAAAGAGCAGAGGAGAAAAAACAGAAACCCATTTCCCAAAATTTTCCATTTCCATTTTCGATTCTTCATCGTTCTGGAAAACAGAGAAAGAAGAGTCAAAGAGGGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAACTTTCTTTCAAACCTCTTCCCTCATCGCATCGTCTTCTTTTCAGCGCATTTCGTTTGCTCAGTACCGAGATGAAGATTGAAGATGGGTTGCGGGGTGTGGGTGGGAAGGATGAGGATAAGACTGTGGTGGCTGCTGTTTTGGGTACTCGTGCTTTTAATTACATGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTTATGGCTGTGAGGAATGATGATAATTTGCAGAACAAGCTTGCGGATCTGGTAGAGACACCCAACGCTTCTAATTTTTGTTGGAATTATGCAATTTTCTGGCAACTTTCCCATTCAAAATCTGGTCAATGGGTTTTGGGATGGGGAGATGGATCGTTTAGGGATCCTAGGGATGGTGAAGGAACAGAAGCTACGCAGATTCTTAGCCTTGAGCTTGAAGATGAGAGCCAACAAAGGATGAAGAAAAGGGCATTGCAGAAGCTTCATACACTGTTTGGTGGGTCTGATGAGGATAATTATGCTCTTGGATTGGATAGAGTTACTGATACTGAGATGTTTTTTCTTGCTTCCATGTACTTCTCCTTTCCTGGTGGAGAGGGGGGTCCTGGGAAGTGTTTCGCTTCTGGGAAACATGTCTGGCATTTGGATGTGCTCAATTCGCCTGCTGAGTATTGTGTGAGGTCCTATCTGGCTAAGTCGGCTGGGATTCGGACCGTCGTTTTGGTGCCAACTGATGTTGGAGTAGTTGAATTGGGTTCTGTGAGATCTGTGAGTGAGAGCTTAGAGTTGGTGCATTTGATTCGATCGTTGTTTTCATCTCAACGTTCGCTTGATGGAGTGAGGACATCGGCTGTGATGTCGAGGATGGCTGAAAGGAAGGATGAAAACGCCCCATTTCCAAGTTTGGGGATTGCAGAAAGAGGAGGGGGGGTTCCTAAGGTTTTTGGGCAGAGTTTGAACTTGGGGAACGTGGGTCGATCTCATTTCAGAGAGAAACTCGCGGTTAGGAAGATGGATGAAAGGGCATGGGAAGTATGTCCCAATGGAGGTAGAATTCAGTTTCAAAGCCCTCGAAATGGCATTCGTAATCCGAGTTTGGGGCATGTTCATCTTCTCAAACCGGGGAATCCTACCGAAACTTTAGGCTCTCCAACTCCACCGGTAAATAATAATCACGAGCAGCTTGTCAATGGAGTTAGAGATGAATTTTGTCTCAATCCCTATCAATCACAGAAGATAGCCCAAATGCAAATTGATTTCTCTGTAGCAACATCAAGGCCGCCTTCTGTGATGAACCGTGTAGGTGCAGATTCAGAACAATTAGATATAGAGCCTCAATGCAAAGAAGAGGGACCTGGCACCGACGAAAGACGACCACGCAAACGAGGCAGAAAGCCTGCAAATGGAAGGGAAGAACCACTAAATCACGTGGAGGCGGAGAGGCAGCGTCGTGAAAAGTTGAACCAGCGGTTCTATGCTTTACGAGCTGTTGTACCCAATATCTCCAAGATGGACAAAGCTTCACTGCTAGGAGATGCCATTGCTTACATTAATGAGCTTCAGTCCAAAGTGAAAGCCATGGAATATGAAAGGGAGCAATCCGGGGTCACCTCAAGTGAAGCAACCCCTTCGGATACGAACCCAGAAATTGAAAACAAAGATCAATTCCTCGATGTTGACATCAACGTCGAAGCAGGTAACGACGAAGTCATCGTTAAGGTTAGCTGCCCATTAGAGTCACACCCTGCATCAAGAGTTATCAAGGCAATGAAAAATGCACAGATCAATGTTGTTGATTCAAAACTCTCTGTTGAAGTAAACGATACAGTTTTGCACACGTTTACGATCAAATCCCCCGGATCGGAGCAGTTGACAAAGGAAGAGTTGATAGCCACAATTTCTTCAATTTCGCGGGATTCGACTCCGTTACATCCTCTATCAACAGTTGGGTAG | 2127 | 45.89 | MVRGGGGGEEEEEGRRSGRAKSRGEKTETHFPKFSISIFDSSSFWKTEKEESKRAVAFLGMFIAFQLSFKPLPSSHRLLFSAFRLLSTEMKIEDGLRGVGGKDEDKTVVAAVLGTRAFNYMMSCSVSNENLFMAVRNDDNLQNKLADLVETPNASNFCWNYAIFWQLSHSKSGQWVLGWGDGSFRDPRDGEGTEATQILSLELEDESQQRMKKRALQKLHTLFGGSDEDNYALGLDRVTDTEMFFLASMYFSFPGGEGGPGKCFASGKHVWHLDVLNSPAEYCVRSYLAKSAGIRTVVLVPTDVGVVELGSVRSVSESLELVHLIRSLFSSQRSLDGVRTSAVMSRMAERKDENAPFPSLGIAERGGGVPKVFGQSLNLGNVGRSHFREKLAVRKMDERAWEVCPNGGRIQFQSPRNGIRNPSLGHVHLLKPGNPTETLGSPTPPVNNNHEQLVNGVRDEFCLNPYQSQKIAQMQIDFSVATSRPPSVMNRVGADSEQLDIEPQCKEEGPGTDERRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAIAYINELQSKVKAMEYEREQSGVTSSEATPSDTNPEIENKDQFLDVDINVEAGNDEVIVKVSCPLESHPASRVIKAMKNAQINVVDSKLSVEVNDTVLHTFTIKSPGSEQLTKEELIATISSISRDSTPLHPLSTVG | 708 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 3928485 | 3931021 | - | Cp4.1LG08g00790.1 | Cpe08g00597 | 473563 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00597 | 708 | MobiDBLite | consensus disorder prediction | 590 | 608 | - | - | |
Cpe08g00597 | 708 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 532 | 593 | IPR036638 | GO:0046983 | |
Cpe08g00597 | 708 | CDD | bHLH_AtAIB_like | 526 | 599 | - | - | |
Cpe08g00597 | 708 | MobiDBLite | consensus disorder prediction | 589 | 608 | - | - | |
Cpe08g00597 | 708 | MobiDBLite | consensus disorder prediction | 500 | 540 | - | - | |
Cpe08g00597 | 708 | Gene3D | - | 523 | 593 | IPR036638 | GO:0046983 | |
Cpe08g00597 | 708 | SMART | finulus | 535 | 584 | IPR011598 | GO:0046983 | |
Cpe08g00597 | 708 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cpe08g00597 | 708 | Pfam | Helix-loop-helix DNA-binding domain | 533 | 579 | IPR011598 | GO:0046983 | |
Cpe08g00597 | 708 | PANTHER | MYC | 102 | 699 | IPR045084 | GO:0003700|GO:0006355 | |
Cpe08g00597 | 708 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 529 | 578 | IPR011598 | GO:0046983 | |
Cpe08g00597 | 708 | MobiDBLite | consensus disorder prediction | 487 | 540 | - | - | |
Cpe08g00597 | 708 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 141 | 329 | IPR025610 | - | |
Cpe08g00597 | 708 | PANTHER | TRANSCRIPTION FACTOR MTB1 | 102 | 699 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g01792 | Cpe08g00597 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00049 | Cpe-Chr5:258527 | Cpe08g00597 | Cpe-Chr8:3928485 | 5.13E-87 | dispersed | |
Cpe08g00597 | Cpe-Chr8:3928485 | Cpe15g00064 | Cpe-Chr15:445225 | 9.20E-100 | dispersed | |
Cpe03g01792 | Cpe-Chr3:13481416 | Cpe08g00597 | Cpe-Chr8:3928485 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49856 | PF14215 | bHLH-MYC_N | 4.50E-52 | CL0161 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00597 | - | - | csv:101208845 | 1032.32 |