Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00649 ATGGGTAAGAAGGGAGGCTCCTCCTGGTTGACTGCTGTCAAAAGGGCTTTTAGATCTCCTTCCAAGGATGAAGACGACAAGAAAAGAGAGAAGCGGAGATGGATTTTCAGGCGATCCACCAATCTACACGACACGGATACTCACCAAACGACGTCGGCTACGGAACATGCATCTTCCGAGGCAGCGCTTGCGGTTGCGGTGGCTACTGCTGAAGCTGCTGTCGCTACTGCTCAAGCGGCTGTGGAGATTGCTCGCCTACCTACTCGGCCTTCCAATCACGCTAGATATCACTATGCTGCGATTGTTATTCAGACCGCTTTTAGGGGATACTTGGCAAGGAGGGCTCTGCGTGCGCTGAAGGGGTTGGTGAAGTTGCAGGCTTTGGTGAGGGGTCACAACGTGAGAAAACAGGCGAAGATGACCCTTCGATGCATGCAAGCGCTGGTTCGAGTGCAAGCCCGTGTGCTCGATCAGCGGATGAGACTCTCCCATGACGGCAGTAGAAAATCCACCTTCAGCGACACAAATAGCGTCCTTGGATCGCGTTATCTCCAAAATTTCTCCGATAGAAAATCCGTTTCTCAGTCAAGGGAGGGAAGTAGCACTGTCACAGACGATTGGGATGAACGGCCCCACTCTGTTGAAGAAGTGAAAGCTATGCTTCAACATAGAAAAGAGATCGCCATGAAGCGTGATCGAAATCTCTCCCACGCCTTCTCCCAACAGATATGGCGGAGAGGTCGAAGTCCATCCATGGGAAGTGGAGATGATTTCGAAGAAAGACCCAAATGGCTGGATCAATGGAATTCAAGGAAGCCATTGGAAAACAGGGGAAGAGCTTCAACGGATCAAAGAGACCCCATAAAAACAGTGGAAATCGACACCTTCCAGCCCTACTCTCACCGGAGAACGGTTCAGAATCAACAAAGAACAAATCCACATTCCGGCAGCTCGCCACTCCACCGGTCGCAACAAAACATACCCTGTTTCCACCACTCACCAGCCACACCATCCCCATCTAAAACAAGGCCTCTGCTAGTCCGGTCCGCAAGCCCACGTATCATCAGAGACGACAAAAGCGAAAATACATCCCAAACACCAAGCTTAAGGTCAAACTATTACTACAGTGGCAATTTACTTCAACAAAGTAGAACAGCAGCAAGTAGCAGCTATAGCCAAGGCAATTGTTTGCCGAATTACATGGCAGCCACAGAGTCCGCAAAGGCACGATTACGGTCACATAGCGCGCCGAGACAACGGCCATCAACGCCGGAGAGGGAGAGAGGAGTTGGGTCAGCTAAAAAACGGCTATCATTCCCAGTTCCTGATCCAAATGGGTATGGCGTTTACGAGCGAAATTTGAAAAGTCCAAGCTTCAAGAGCGTAAGCGGGACATACTTTGGGATGGAGCAGCAATCCAACTATTCATCTTGCTGCACCGACAGCCTCGGCGGCGAGATTTCCCCTTCTTCAACGACGGATCTAAGAAGATGGCTAAGGTGA 1503 50.57 MGKKGGSSWLTAVKRAFRSPSKDEDDKKREKRRWIFRRSTNLHDTDTHQTTSATEHASSEAALAVAVATAEAAVATAQAAVEIARLPTRPSNHARYHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHDGSRKSTFSDTNSVLGSRYLQNFSDRKSVSQSREGSSTVTDDWDERPHSVEEVKAMLQHRKEIAMKRDRNLSHAFSQQIWRRGRSPSMGSGDDFEERPKWLDQWNSRKPLENRGRASTDQRDPIKTVEIDTFQPYSHRRTVQNQQRTNPHSGSSPLHRSQQNIPCFHHSPATPSPSKTRPLLVRSASPRIIRDDKSENTSQTPSLRSNYYYSGNLLQQSRTAASSSYSQGNCLPNYMAATESAKARLRSHSAPRQRPSTPERERGVGSAKKRLSFPVPDPNGYGVYERNLKSPSFKSVSGTYFGMEQQSNYSSCCTDSLGGEISPSSTTDLRRWLR 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4388801 4392109 + Cp4.1LG08g00270.1 Cpe08g00649 473615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00649 500 MobiDBLite consensus disorder prediction 1 30 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 37 56 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 297 345 - -
Cpe08g00649 500 PANTHER PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 1 500 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 419 433 - -
Cpe08g00649 500 Pfam Protein of unknown function (DUF4005) 351 450 IPR025064 -
Cpe08g00649 500 PANTHER IQ-DOMAIN 5-RELATED 1 500 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 190 211 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 480 500 - -
Cpe08g00649 500 ProSiteProfiles IQ motif profile. 96 124 IPR000048 GO:0005515
Cpe08g00649 500 Pfam IQ calmodulin-binding motif 123 139 IPR000048 GO:0005515
Cpe08g00649 500 Pfam IQ calmodulin-binding motif 99 117 IPR000048 GO:0005515
Cpe08g00649 500 MobiDBLite consensus disorder prediction 407 447 - -
Cpe08g00649 500 SMART iq_5 95 117 IPR000048 GO:0005515
Cpe08g00649 500 SMART iq_5 118 139 IPR000048 GO:0005515
Cpe08g00649 500 MobiDBLite consensus disorder prediction 244 371 - -
Cpe08g00649 500 ProSiteProfiles IQ motif profile. 120 147 IPR000048 GO:0005515
Cpe08g00649 500 Gene3D - 93 148 - -
Cpe08g00649 500 MobiDBLite consensus disorder prediction 252 290 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00598 Cpe-Chr5:3631166 Cpe08g00649 Cpe-Chr8:4388801 2.27E-24 dispersed
Cpe08g00649 Cpe-Chr8:4388801 Cpe12g00436 Cpe-Chr12:3406540 1.47E-178 dispersed
Cpe08g00649 Cpe-Chr8:4388801 Cpe01g02257 Cpe-Chr1:19147453 2.65E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00649 - - zju:107423775 667.151