Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00649 | ATGGGTAAGAAGGGAGGCTCCTCCTGGTTGACTGCTGTCAAAAGGGCTTTTAGATCTCCTTCCAAGGATGAAGACGACAAGAAAAGAGAGAAGCGGAGATGGATTTTCAGGCGATCCACCAATCTACACGACACGGATACTCACCAAACGACGTCGGCTACGGAACATGCATCTTCCGAGGCAGCGCTTGCGGTTGCGGTGGCTACTGCTGAAGCTGCTGTCGCTACTGCTCAAGCGGCTGTGGAGATTGCTCGCCTACCTACTCGGCCTTCCAATCACGCTAGATATCACTATGCTGCGATTGTTATTCAGACCGCTTTTAGGGGATACTTGGCAAGGAGGGCTCTGCGTGCGCTGAAGGGGTTGGTGAAGTTGCAGGCTTTGGTGAGGGGTCACAACGTGAGAAAACAGGCGAAGATGACCCTTCGATGCATGCAAGCGCTGGTTCGAGTGCAAGCCCGTGTGCTCGATCAGCGGATGAGACTCTCCCATGACGGCAGTAGAAAATCCACCTTCAGCGACACAAATAGCGTCCTTGGATCGCGTTATCTCCAAAATTTCTCCGATAGAAAATCCGTTTCTCAGTCAAGGGAGGGAAGTAGCACTGTCACAGACGATTGGGATGAACGGCCCCACTCTGTTGAAGAAGTGAAAGCTATGCTTCAACATAGAAAAGAGATCGCCATGAAGCGTGATCGAAATCTCTCCCACGCCTTCTCCCAACAGATATGGCGGAGAGGTCGAAGTCCATCCATGGGAAGTGGAGATGATTTCGAAGAAAGACCCAAATGGCTGGATCAATGGAATTCAAGGAAGCCATTGGAAAACAGGGGAAGAGCTTCAACGGATCAAAGAGACCCCATAAAAACAGTGGAAATCGACACCTTCCAGCCCTACTCTCACCGGAGAACGGTTCAGAATCAACAAAGAACAAATCCACATTCCGGCAGCTCGCCACTCCACCGGTCGCAACAAAACATACCCTGTTTCCACCACTCACCAGCCACACCATCCCCATCTAAAACAAGGCCTCTGCTAGTCCGGTCCGCAAGCCCACGTATCATCAGAGACGACAAAAGCGAAAATACATCCCAAACACCAAGCTTAAGGTCAAACTATTACTACAGTGGCAATTTACTTCAACAAAGTAGAACAGCAGCAAGTAGCAGCTATAGCCAAGGCAATTGTTTGCCGAATTACATGGCAGCCACAGAGTCCGCAAAGGCACGATTACGGTCACATAGCGCGCCGAGACAACGGCCATCAACGCCGGAGAGGGAGAGAGGAGTTGGGTCAGCTAAAAAACGGCTATCATTCCCAGTTCCTGATCCAAATGGGTATGGCGTTTACGAGCGAAATTTGAAAAGTCCAAGCTTCAAGAGCGTAAGCGGGACATACTTTGGGATGGAGCAGCAATCCAACTATTCATCTTGCTGCACCGACAGCCTCGGCGGCGAGATTTCCCCTTCTTCAACGACGGATCTAAGAAGATGGCTAAGGTGA | 1503 | 50.57 | MGKKGGSSWLTAVKRAFRSPSKDEDDKKREKRRWIFRRSTNLHDTDTHQTTSATEHASSEAALAVAVATAEAAVATAQAAVEIARLPTRPSNHARYHYAAIVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRMRLSHDGSRKSTFSDTNSVLGSRYLQNFSDRKSVSQSREGSSTVTDDWDERPHSVEEVKAMLQHRKEIAMKRDRNLSHAFSQQIWRRGRSPSMGSGDDFEERPKWLDQWNSRKPLENRGRASTDQRDPIKTVEIDTFQPYSHRRTVQNQQRTNPHSGSSPLHRSQQNIPCFHHSPATPSPSKTRPLLVRSASPRIIRDDKSENTSQTPSLRSNYYYSGNLLQQSRTAASSSYSQGNCLPNYMAATESAKARLRSHSAPRQRPSTPERERGVGSAKKRLSFPVPDPNGYGVYERNLKSPSFKSVSGTYFGMEQQSNYSSCCTDSLGGEISPSSTTDLRRWLR | 500 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 4388801 | 4392109 | + | Cp4.1LG08g00270.1 | Cpe08g00649 | 473615 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 37 | 56 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 297 | 345 | - | - | |
Cpe08g00649 | 500 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 1 | 500 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 419 | 433 | - | - | |
Cpe08g00649 | 500 | Pfam | Protein of unknown function (DUF4005) | 351 | 450 | IPR025064 | - | |
Cpe08g00649 | 500 | PANTHER | IQ-DOMAIN 5-RELATED | 1 | 500 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 190 | 211 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 480 | 500 | - | - | |
Cpe08g00649 | 500 | ProSiteProfiles | IQ motif profile. | 96 | 124 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | Pfam | IQ calmodulin-binding motif | 123 | 139 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | Pfam | IQ calmodulin-binding motif | 99 | 117 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 407 | 447 | - | - | |
Cpe08g00649 | 500 | SMART | iq_5 | 95 | 117 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | SMART | iq_5 | 118 | 139 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 244 | 371 | - | - | |
Cpe08g00649 | 500 | ProSiteProfiles | IQ motif profile. | 120 | 147 | IPR000048 | GO:0005515 | |
Cpe08g00649 | 500 | Gene3D | - | 93 | 148 | - | - | |
Cpe08g00649 | 500 | MobiDBLite | consensus disorder prediction | 252 | 290 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00598 | Cpe-Chr5:3631166 | Cpe08g00649 | Cpe-Chr8:4388801 | 2.27E-24 | dispersed | |
Cpe08g00649 | Cpe-Chr8:4388801 | Cpe12g00436 | Cpe-Chr12:3406540 | 1.47E-178 | dispersed | |
Cpe08g00649 | Cpe-Chr8:4388801 | Cpe01g02257 | Cpe-Chr1:19147453 | 2.65E-48 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00649 | - | - | zju:107423775 | 667.151 |