Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00669 ATGATGGGAAGGGAAAGAGAAGGAGAGATGGAAGAAGATTTTTCAAAACAAAAGCTAGAACTCGACGGTTACCATGATAACGGAGATTCTAAGTTATCTTGCTGGAAAAGGAAACTAACACTACTCAGTCTCGATTCATCAATCAGAAATGGCGAGAGATCGACAGATGCAGGGAAGAACAATAGCGCAAACTTCAGATCTCTAAATCAAATTGTCATTCATCCTCACGACTGGCGATACGTTCTTTGGACGCATTTCATTTTGGTATGGGCTGTGTACTCTTCCTTCTTTACGCCACTGGAATTCGGATTCTTCAGGGGTCTCCCCAAGAATCTCTTCCTCCTCGACGTTGCCGGCCAGATCGCCTTTCTCATCGATATCGCTGTTCACTTTTGTGTTGCCTATCGCGATTCGCATTCTTACCGCTTTGTCTACGACCGTAATCTCATCGCTATCAGATATTTGAAGTCTCGATTTGTGGTTGACTTAATGGGTTGTATGCCCTGGGACGCCATCTACAAGGCTTCTGGTAAGAAGGAGCTTGTGAGATATTTACTATGGATTCGGCTAAGTCGAGCCTTAAGAGTTACTGAATTCTTTGAGAAATTGGAGAAGGATATACGAATAAATTACCTTGGTACAAGAATTGCGAAGCTTTTTGTTGTGGAGCTTTATTGTACTCATACAGCTGCCTGTATTTTCTACTATCTTGCTACTACTCTACCTCCGTCAAAAGAAGGGTACACCTGGATAGGAAGCCTAAAGTTGGGGGACTATAGCTATTCAAACTTTAGAGAAATTGATCTTTGGAAGCGTTACATCACATCATTATATTTTGCTGTTGTAACTATGGCAACTGTTGGTTATGGTGACATGCATGCAGTCAATGTCAGGGAAATGATTTTTATCATGATTTTTATCTCCTTTGATATGATTCTTGGTTCTTATTTGCTTGGTAACATGGCAGCATTGATAGTAAAAGGATCAAAAACAGAGAAGTTTAGAGATAAAATGAAGGACGTTATTAAATACGTGAATAAAAATAAGCTCAATAGGAAATTAAGTAAAGACATCAAAGATCATCTTCAATTACAGTACTGCAACTCCTCTGAGTTTGGTGTTCTTCAAGATATTCCAGCTTCAATTCGTGCCAAGATATCACAGAAATTGTACGAGCCATACATTAAGGAAGTCTCTCTTTTCAAAGGTTGCTCTCAGGGATTCATAAAACGCATTGCAACCAAAGTTCGTGAAGAGGCTTTTTTCCCTGGACAAATGATTATTGAACGTGAAAACTTGGTTGACCAACTCTATGTTGTATGTCATGGTGAATTGGAGGAAATTGAAAACTGGGATACTGAAGATGAAGAGTTAATTAGGTGTCTTGGAACATATAGCTCATTTGGTGAAATTTCTTTCCTTTGCAATTCTCCTCATCCCTACCATGTTCGGGTTCGTGAGTTTTCCAAGATCTTGCAACTCGATAAACTGTCATTTAAAGAAACCTTGGAATTACACTTTTTAGATGGACAGATCATCTTAGACAATGCCCTTGAGGGAAAGGATTCCAACCAACAAGATCAAATTTTGGAATCTGACATAATTCTTTACATTCAAAAGCGTGAACTTGAGTTAGCCATTAAGGTCAACTGTGCTGCTCATGATGGGGATCTAAATCAACTCAAACGGTTGATTAAAGCAGGAGCAGATCCCAATAAAACAGATTATGATGGAAGATCGCCTCTGCATTTTGCTGCATCGAAAGGATATGAAGCTATTGCTTGTTTTCTTATTGAACAAGGAGCAGAAGTTAATGTTCCAGATAAGTTTGGGAACATGCCTTTACTTGAAGCCATTCAGAATGGACATGAGCAAGTAGGTTCTTTACTTGCCAAAGCTGGAGCAACCATTGTTGCTAATGATGCTGGTGGACTTCTTTGTTCTACTGTCGCAAGAAGGGATTTGGGTTTTCTGAAAGGACTTCTGGCTAATGGCATTGATCCAAATGCTAGAAACTATGATCAACGGACTCCACTTCACATAGCTGTCTCAGAAGGTTTGTATCCTTTTGCAGAGGTCCTTTTAAATGCTGGAGCCAGTGTTTTTGCAACGGACAGCTATGACTGTGATTTAGCTACTATTCAGAGATGCCCTGACAAAGACTATGGGATAATATGTAGATGGGGAAATACTCCGCTTGATGAAGCTCGTACCAGAGGAAATAAGAATTTGATCAGGCTACTTGAAGTTGCAAGAATTTTTCAGTCATCTGAAAACAACTCTGATATATCCGAAGAGATTCAAGACACTATT 2313 39.6 MMGREREGEMEEDFSKQKLELDGYHDNGDSKLSCWKRKLTLLSLDSSIRNGERSTDAGKNNSANFRSLNQIVIHPHDWRYVLWTHFILVWAVYSSFFTPLEFGFFRGLPKNLFLLDVAGQIAFLIDIAVHFCVAYRDSHSYRFVYDRNLIAIRYLKSRFVVDLMGCMPWDAIYKASGKKELVRYLLWIRLSRALRVTEFFEKLEKDIRINYLGTRIAKLFVVELYCTHTAACIFYYLATTLPPSKEGYTWIGSLKLGDYSYSNFREIDLWKRYITSLYFAVVTMATVGYGDMHAVNVREMIFIMIFISFDMILGSYLLGNMAALIVKGSKTEKFRDKMKDVIKYVNKNKLNRKLSKDIKDHLQLQYCNSSEFGVLQDIPASIRAKISQKLYEPYIKEVSLFKGCSQGFIKRIATKVREEAFFPGQMIIERENLVDQLYVVCHGELEEIENWDTEDEELIRCLGTYSSFGEISFLCNSPHPYHVRVREFSKILQLDKLSFKETLELHFLDGQIILDNALEGKDSNQQDQILESDIILYIQKRELELAIKVNCAAHDGDLNQLKRLIKAGADPNKTDYDGRSPLHFAASKGYEAIACFLIEQGAEVNVPDKFGNMPLLEAIQNGHEQVGSLLAKAGATIVANDAGGLLCSTVARRDLGFLKGLLANGIDPNARNYDQRTPLHIAVSEGLYPFAEVLLNAGASVFATDSYDCDLATIQRCPDKDYGIICRWGNTPLDEARTRGNKNLIRLLEVARIFQSSENNSDISEEIQDTI 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 4625647 4653127 - Cp4.1LG08g00080.1 Cpe08g00669 473635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00669 771 ProSiteProfiles Ankyrin repeat profile. 674 706 IPR002110 GO:0005515
Cpe08g00669 771 ProSiteProfiles Ankyrin repeat region circular profile. 577 609 - -
Cpe08g00669 771 PRINTS EAG/ELK/ERG potassium channel family signature 225 235 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe08g00669 771 PRINTS EAG/ELK/ERG potassium channel family signature 273 290 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe08g00669 771 PRINTS EAG/ELK/ERG potassium channel family signature 317 326 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe08g00669 771 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Cpe08g00669 771 Pfam Ankyrin repeats (3 copies) 552 641 IPR002110 GO:0005515
Cpe08g00669 771 SUPERFAMILY Ankyrin repeat 550 748 IPR036770 -
Cpe08g00669 771 ProSiteProfiles Ankyrin repeat region circular profile. 674 705 - -
Cpe08g00669 771 Pfam Ion transport protein 82 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe08g00669 771 Gene3D - 648 751 IPR036770 -
Cpe08g00669 771 ProSiteProfiles cAMP/cGMP binding motif profile. 400 503 IPR000595 -
Cpe08g00669 771 PANTHER POTASSIUM CHANNEL AKT1 77 763 IPR045319 GO:0005249|GO:0006813
Cpe08g00669 771 Gene3D - 520 647 IPR036770 -
Cpe08g00669 771 PANTHER CHANNEL AKT1 PROTEIN, PUTATIVE-RELATED 77 763 - -
Cpe08g00669 771 CDD CAP_ED 400 514 IPR000595 -
Cpe08g00669 771 Gene3D Jelly Rolls 387 512 IPR014710 -
Cpe08g00669 771 Gene3D Helix hairpin bin 328 386 - -
Cpe08g00669 771 SMART cnmp_10 400 521 IPR000595 -
Cpe08g00669 771 ProSiteProfiles Ankyrin repeat profile. 610 642 IPR002110 GO:0005515
Cpe08g00669 771 SUPERFAMILY cAMP-binding domain-like 329 516 IPR018490 -
Cpe08g00669 771 SMART ANK_2a 674 703 IPR002110 GO:0005515
Cpe08g00669 771 SMART ANK_2a 610 639 IPR002110 GO:0005515
Cpe08g00669 771 SMART ANK_2a 577 606 IPR002110 GO:0005515
Cpe08g00669 771 SMART ANK_2a 542 573 IPR002110 GO:0005515
Cpe08g00669 771 Pfam Cyclic nucleotide-binding domain 421 504 IPR000595 -
Cpe08g00669 771 Pfam Ankyrin repeats (many copies) 661 707 IPR002110 GO:0005515
Cpe08g00669 771 Gene3D - 81 327 - -
Cpe08g00669 771 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Cpe08g00669 771 SUPERFAMILY Voltage-gated potassium channels 74 326 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00669 Cpe-Chr8:4625647 Cpe13g00570 Cpe-Chr13:5646196 0 dispersed
Cpe08g00669 Cpe-Chr8:4625647 Cpe01g02003 Cpe-Chr1:17087648 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00669 K21867 - tcc:18604419 975.311