Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00684 ATGGGTTTCTTAGTTTCTCTCTTCAAACAGAAGGGTTTTGTTATTTTCTTGAATCTCTCGTTTCTCTCACTGGCTTGTGCTTTTTTAGCGATTCGATTTCACTATCCAGAAGAAACCCAATTCCGTGTTCTTAACAAGAGCTTCAGAAAACTCCATGGCACTGCTCAGGAAGATTGCCGGAATTTTATTGGTCTACCTGACTTTGAAGCTAAGTGCTCTGTTCTTAAATCCAACAACCCTTGTAACACCCAAGGCTATATAGATTATCTTTATGTTTTCTATTGTCAGTATGGAAGTTTTAGCATTCTGGGCTATACTCTGTTGTTTCTGTGGCTTCTTGTGTTGTTCTATCTTTTGGGTAACACTGCTTCTGAATACTTTTGCTCTTCCCTTGAGAGTTTGTCGAAATTGTTGAATCTATCCCCAACAATTGCTGGTGTTACTCTGCTTTCTTTGGGTAATGGCGCACCTGATGTTTTTTCCAGCCTTGTTGCTTTCATGGGAGATGGAACTACTGATATTGGCTTGAATACTGTTCTTGGTGGAGCCTCGTTTGTTACCTGCGTCGTTGTCGGAATCATAAGCATTTTGCTGCGTTTTCGACGGATTAAGGTTAATAGGGTTGCCTTCATTAGAGATGTTTTGTTCTTCCTCTTGGTTCTTTTGTCTGTTTTTTTTATATTGCTTCATGGACATATCAATCTGTGGGGTTCCCTTGCCTTTTCTTCCATGTATCTTGTTTATGTTTTGGTTGTTTATGTCTCCCATGCCCAATGGCTGAGTTTGAGGAGGGATATTTTCCAACCCCTTTTGAAAGAGCCACCAAAGGATGAGTCTGAGGGCCAAAATGACGATGACGACAACGACGACGGTGTTAGAATCGACGTATACGATGTCTGTTTTTGTCCTAGTTTTTCGCCTTCTTGTGTTTTTTTCCTTCGCCTTCTTGAGATTCCTCTTTACTTGCCTAGAAGGCTGACAATTCCCACTATTGCTGAAGAAAACTGGTGTAGACTGTATGCAGTTGCTTCAGTGACATTAGCTCCCATTCTCTTAGCTTTTCTATGGGCATTTCACCACCAGATCGATATGTCTCGGTCGAACGTAATCATCTGCATCGTCGCCTTGCTGGTCGGAGTTAGTTTTGGAATTGTTGCATTTGTGACAACTGAGAATTCAAGCCCACCAAAGAAGTGGCTGTTCCCATGGCTTGCAGCTGGGTTCACCATGAGTTTAACATGGAGTTATATTATAGCTCAGGAACTGGTAGGGCTATTGGTTTCACTTGGCTACATAATGGGCATAAGCCCTTCAATTCTAGGACTGACCTTCCTGGCTTGGGGAAACTCTCTTGGGGATTTAGTTTCCAATGTGACCGTGTCCTTGAACGGCGGGCAGCGAGGCGCCCAAATAGCCATCTCCGGCTGCTACGCCGGCCCCATCTTCAGTACGCTGTTCGGCCTTGGGATGTCCCTTGTCAGCGCTTCATGGAAGAAGTATCCTGAGCCGGTGGCCATCCCGGCTGACCCTTACGTGATGGAGACATTGGGGCTGTTGGTAGGAGGGCTGCTATGGGCGCTTGTAAGTTTGCCAAGGAGAGAGATGAGGGTTGATGCAGTGTTGGGAGGAGGCCTTCTGGCTATCTATTTGACCTCTTTGCTCTTAAGAGTGTTGCAAGCTCTTGGGTCTTCCCATTAG 1698 44.82 MGFLVSLFKQKGFVIFLNLSFLSLACAFLAIRFHYPEETQFRVLNKSFRKLHGTAQEDCRNFIGLPDFEAKCSVLKSNNPCNTQGYIDYLYVFYCQYGSFSILGYTLLFLWLLVLFYLLGNTASEYFCSSLESLSKLLNLSPTIAGVTLLSLGNGAPDVFSSLVAFMGDGTTDIGLNTVLGGASFVTCVVVGIISILLRFRRIKVNRVAFIRDVLFFLLVLLSVFFILLHGHINLWGSLAFSSMYLVYVLVVYVSHAQWLSLRRDIFQPLLKEPPKDESEGQNDDDDNDDGVRIDVYDVCFCPSFSPSCVFFLRLLEIPLYLPRRLTIPTIAEENWCRLYAVASVTLAPILLAFLWAFHHQIDMSRSNVIICIVALLVGVSFGIVAFVTTENSSPPKKWLFPWLAAGFTMSLTWSYIIAQELVGLLVSLGYIMGISPSILGLTFLAWGNSLGDLVSNVTVSLNGGQRGAQIAISGCYAGPIFSTLFGLGMSLVSASWKKYPEPVAIPADPYVMETLGLLVGGLLWALVSLPRREMRVDAVLGGGLLAIYLTSLLLRVLQALGSSH 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5219935 5221632 + Cp4.1LG08g06840.1 Cpe08g00684 473650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00684 565 Gene3D - 337 557 IPR044880 -
Cpe08g00684 565 Gene3D - 140 266 IPR044880 -
Cpe08g00684 565 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016021|GO:0055085
Cpe08g00684 565 Pfam Sodium/calcium exchanger protein 404 555 IPR004837 GO:0016021|GO:0055085
Cpe08g00684 565 PANTHER CATION/CALCIUM EXCHANGER 2 8 563 - -
Cpe08g00684 565 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 563 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00684 Cpe-Chr8:5219935 Cpe18g00071 Cpe-Chr18:1741193 8.98E-60 dispersed
Cpe04g01015 Cpe-Chr4:9056805 Cpe08g00684 Cpe-Chr8:5219935 1.61E-35 transposed
Cpe03g00470 Cpe-Chr3:2714883 Cpe08g00684 Cpe-Chr8:5219935 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00684 K13754 - csv:101204766 879.011