Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00726 ATGCATATTGAGGAGTTGAAGGAAGGGGAGTTGCAGAGTGGGGAAGAGGGAAATTCAGGTGCTATTGTAAGTAATTTGGTGGACCAGAGCGTTATTAGGTCTGATGTTAAAAGGATCGTTGTTGGAGTTGGGGCTCGTGTTCTTTTCTACCCGACTTTGCTTTACAATGTTTTCAGAAATAAGCTTCAGACGGAGTTTCGTTGGTGGGACAGGGTCGATGAGTTTATATTGTTAGGTGCTGTTCCATTCCCTGCCGATGTTCCCCGTTTGAAGGAGGTTGGCGTTGGAGGAGTGATAACACTAAATGAGCCATATGAGACTTTGGTTCCTTCAACTCTATATCGTGATTATGACATTGATCATCTGACCATTCCAACTAGAGACTATTGCTTTGCACCTTTATTGAGTGACATTTGCATTGCTACAAATTTCATCCACAAAAATGCATCGCACGGACAGACTACATATGTTCATTGTAAAGCTGGACGAGGGCGTAGCACAACTGTTGTTATCTGCTATTTGGTGCAATACAAGCAAATGACGCCAGATGAAGCTTACAAACACGTGAAGTCAATCAGGCCAAGGGTGCTTCTAGCATCATCACAGTGGCAGGCTGTTCTGGAATTCTACCACATGATTGTTCAGAGGGATGTTTCCTTCTGCCACATAGATGACCTAGGAAAGGAAGCATCTGGCTCATCACACGATCTTATCACATTTGATGATAGTTCTGTAGTTGTTGTAAAAGGATCTGATCTTGAAGGATATGACTCAAGTATCAGCCAAAGTGAAATGGGCGATATCTGGGCAGATTTAAATGTGGTCTGCAGGGTTCGTGTTGCTGGTCAGGCAGCCCTCACAAGAATCTCCTGTTTGTGGCTCAGCTATCGAGAAAAACACCATAGCAAGAAAATTTCAGGAGATGATCTAGGTGTTGGGAAGGGCTGTTCACTCAGTGCTGCTCATTTGGAAGGGTTCAGTGTGGACATCCATGTCTATTAA 1002 43.81 MHIEELKEGELQSGEEGNSGAIVSNLVDQSVIRSDVKRIVVGVGARVLFYPTLLYNVFRNKLQTEFRWWDRVDEFILLGAVPFPADVPRLKEVGVGGVITLNEPYETLVPSTLYRDYDIDHLTIPTRDYCFAPLLSDICIATNFIHKNASHGQTTYVHCKAGRGRSTTVVICYLVQYKQMTPDEAYKHVKSIRPRVLLASSQWQAVLEFYHMIVQRDVSFCHIDDLGKEASGSSHDLITFDDSSVVVVKGSDLEGYDSSISQSEMGDIWADLNVVCRVRVAGQAALTRISCLWLSYREKHHSKKISGDDLGVGKGCSLSAAHLEGFSVDIHVY 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5713844 5718289 - Cp4.1LG08g07310.1 Cpe08g00726 473692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00726 333 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Cpe08g00726 333 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Cpe08g00726 333 Pfam Dual specificity phosphatase, catalytic domain 112 210 IPR000340 GO:0008138|GO:0016311
Cpe08g00726 333 CDD PTPMT1 68 210 IPR044596 GO:0004721
Cpe08g00726 333 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Cpe08g00726 333 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 62 214 IPR029021 -
Cpe08g00726 333 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 333 - -
Cpe08g00726 333 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
Cpe08g00726 333 Gene3D Protein tyrosine phosphatase superfamily 68 219 IPR029021 -
Cpe08g00726 333 PANTHER - 1 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00726 Cpe-Chr8:5713844 Cpe11g01148 Cpe-Chr11:9491701 8.89E-93 dispersed
Cpe14g00928 Cpe-Chr14:7805755 Cpe08g00726 Cpe-Chr8:5713844 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00726 - - csv:101222975 605.52