Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00736 AAGAGAAAGAGAAAGAGAAAATCAATGGAAGACTTTGGTATCATGTCTGGGTTGGTGGCCGTGCAGTTTGTGTATGCAGGGAACTCTGTTTTCATGAGCTTTCTCATGTCTTTAAGCATTGATCCATTAACTCTCATCATCTTCACAACCTTCTTCACTTTTCTCATTGTCTCTCCCGTTGCTGTTTATTTCGAACGGTCGAATTGGCCGACCAAACTTAGTCTAAAGTTGATAACTCAGATTCTTCTCATATCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTTCTTAAAGGAATACAGCTAACTTCGCCTTCGGTAGCGACTGCGATGCCGAATCTCGCCCCGGGACTCATTTTTGTTATTGCTTGGATCTTTAGATTAGAAAAGGTTCGGCTAAGTTGTATCTATAGCAAGATCAAGCTTTTAGGTACATTTCTCTGTGTGATAGGCGCATTCACCATGAGTATAATGCACAGCACTTTGTCGGATGCAGCTGCAAATGATAATGTCGGACGACGTCTGACGGATCAAGCGTTTGATGAACAAAAGATCGTCGGTTGCGTGTATCTTGTCTCGGCGGTAGTCGTTTTGTCTAGCGTAGTTGTTCTTCAGGCATCGACACTAGGAGATTTCCCGACACCGATGTCGTTGTGTGCGATAACGTCGCTCGTTGGAGTGCTCATAACCGTAGTTATACACATATCTCTATATCAGAAACTTGAAATTGGTTGGTCATATCTGAGTGTTGAAAAGTTGATAGCCTATTGTGTTCTAGTAAGCAGCATTCAATTCTGTGGTATTTTAAGATCATTCTTAGTACATATTGGGTGCATATTGATGTATGTTTTTACAAATGTTGGTGACGAGAAGAGCGGAACCGTTAGCGGGGCTTGCGTGAGCTTCAACGGGTGGGCGATGAAGAAACGAGGGCCCGTTTTGGTGTCGATGTTTAGTCCGATTGGAACCGTTTGCTCACTCGTTCTCTCAGTTTTCACCTTGGGAGAACCCATCAAGATTGGAAGCCTTGTTGGTATGTTCCTCATGTTCACCGGGCTCTACTTCGTGCTATGGGCGAAACGGAAGGAAGGTTATGCCAACCGAAACCGCCCCGAGAGTGAGTTCGACATCGACGAGCCTCTTTTAAGTTGA 1152 44.27 KRKRKRKSMEDFGIMSGLVAVQFVYAGNSVFMSFLMSLSIDPLTLIIFTTFFTFLIVSPVAVYFERSNWPTKLSLKLITQILLISFGGVTLFQSLFLKGIQLTSPSVATAMPNLAPGLIFVIAWIFRLEKVRLSCIYSKIKLLGTFLCVIGAFTMSIMHSTLSDAAANDNVGRRLTDQAFDEQKIVGCVYLVSAVVVLSSVVVLQASTLGDFPTPMSLCAITSLVGVLITVVIHISLYQKLEIGWSYLSVEKLIAYCVLVSSIQFCGILRSFLVHIGCILMYVFTNVGDEKSGTVSGACVSFNGWAMKKRGPVLVSMFSPIGTVCSLVLSVFTLGEPIKIGSLVGMFLMFTGLYFVLWAKRKEGYANRNRPESEFDIDEPLLS 383
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5816819 5818414 + Cp4.1LG08g07380.1 Cpe08g00736 473702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00736 383 Pfam EamA-like transporter family 13 156 IPR000620 GO:0016020|GO:0016021
Cpe08g00736 383 PANTHER OS11G0588100 PROTEIN 12 383 - -
Cpe08g00736 383 PANTHER WAT1-RELATED PROTEIN 12 383 IPR030184 GO:0016021|GO:0022857
Cpe08g00736 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 362 - -
Cpe08g00736 383 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00736 Cpe-Chr8:5816819 Cpe10g00870 Cpe-Chr10:4902433 3.68E-33 dispersed
Cpe05g00250 Cpe-Chr5:1423194 Cpe08g00736 Cpe-Chr8:5816819 7.54E-136 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00736 - - cmo:103490881 489.189