Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00744 ATGAGGGGTATTCCCTTTCAGTTTCAGGGGAAGGGGGAGTTGGAAATTTCAGCCGCTTTTTCTTCTCCGATTTGCTCTGGTTTTGCACAGAAGTGGGTTAAGAAAGGAGAACAACAACAACAACAACAACAACAACAACAACTAGAAGCAGAAGAAGAACAAGAAGAAGGTCTTTCTTATTTTGTTTTGCCCAACAACGAACCCACTTCCGTTCTTCATATGAGAAGCCCCAGTCCTCCCACATCGGCTTCTACTCTCTCTTCTTCCTTTGGGGGCGGCGGTGCTGGTGGTGGCTGTGTTCCTTCATTTCCGCCGGAGACTCCTTCTGTTGAGCCGCTCAATGGAGCTGGGGTTGGGACTCCCATTTTTCCCGGTGGACTAGAGCGATGTGGTGTTGGATTAGAAGATTTGGAGAGTATGTGGACGGAATCGGCTGGACCAGAGCAGTCTTTTCTCCGATGGATCGCCGGAGATGTTGTTGAAGATCCCAGTCTAGGGATTAAAACTGTTTTGCAAAATGGGAATATCCCCTTTGATATGGATAGCAATGGCAGTATGGGAATTGTCGATCAGGGTTCCGAATTTGACCCCGCTGCTGCTGCTGCTGCTGCTGGTAATGTTCTTTCTAATATCAATCCTAATTTATCGTTTCCTGTTGCTGCTGCTTGTACTGGGTTTTCTGATGTTAATGGTAGTAATAATAAGCCTTTTAGTAGAACAACTTACAAGAGTTCTTGTTTGGGGTTGAACAATCGCCATGGAAATTTCAATGTTCAGAACCCTATCTTTTCTGGGTCTGTTGAGAATCTTGTTGTTCCTGTTTCTGCCATGATTTATCCTCCGCAGCTTCCGCCATTTGAGGCCCTTGATGAGAAGCCTCAGAATTTGAATGCTCAGAATCCCCCACAGCAGCAACAGCAACATGCTTTGCTGGACCAGCTCTACAAGGCAGCAGAACTGGTTGGGACAGGGAATTTCTCACACGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCTGTTGGAAAGCCCCTTCAAAGGGCTGCTTTCTACTTCAAGGAGGCTCTTCAATTGCTTCTCCTTATGAACAATCCTGTTAATCCTCCTCCACCTCGCTGCCCGACACCGTGTGATGTGATCTTCAAGATGGGTGCTTACAAGGTGTTTTCGGAGATCTCACCACTTATTCAGTTTGTGAATTTCACCTGTAACCAGGCACTACTTGAGGCCCTCGATGATGTCGATCAAATTCACATTGTTGATTTCGATATCGGTTTTGGAGCTCAATGGGCCTCTTTTATGCAGGAATTGTCCTTGAGGAACCAGGGTGCTCCATCACTAAAAATCACTGCTTTTGCCTCTCCCTCCACACACTATCCCATTGAACTCGGGCTCATGCGCGATAATCTCACTCAATTTGCTAATGACATTGGAATAAGTTTCGAGTTCGAAGTGGTGAACTTTGATTCTTTGAACCAAAACTCCTTCTCCTTGCCGTTTTCTCGTGCAAGCGAAAACGAGGCTATTGCAGTAAACTTCCCTCTATGGTCCTCATCAAATCAACCAGCAATGCTTCCGTCTCTCCTCCGTTTCATCAAGCAACTCTCACCAAAAATCGTGGTATCACTGGATCGAGGGTGTGATCGAAGTGACCTTCCATTTCCTCAGCATATGCTTCAGGCACTTCAATCCTACATTAACCTCCTGGAATCTCTGGATGCTATCAATATGAATTCGGATGCAATCAACAAGATCGAGAGGTTTCTTTTGCAACCAAGAATCGAAAGCACTGTTCTGGGGCGGCTTCGAGTACCTCAAAGAATGCCCCTATGGAAGACACTTTTCGCCTCAGCTGGGTACACACCAGTAACATTCAGCAACTTTACCGAAACTCAAGCCGAATGTGTAGCAAAGAGAACTTCTGTGAGGGGATTTCATGTCGAGAAACGCCAGGCTTCCCTTGTTTTTTGCTGGCAGCGTCGGGAGCTCATATCTGCTTCAGCTTGGAGGTGTTGA 2022 46.59 MRGIPFQFQGKGELEISAAFSSPICSGFAQKWVKKGEQQQQQQQQQQLEAEEEQEEGLSYFVLPNNEPTSVLHMRSPSPPTSASTLSSSFGGGGAGGGCVPSFPPETPSVEPLNGAGVGTPIFPGGLERCGVGLEDLESMWTESAGPEQSFLRWIAGDVVEDPSLGIKTVLQNGNIPFDMDSNGSMGIVDQGSEFDPAAAAAAAGNVLSNINPNLSFPVAAACTGFSDVNGSNNKPFSRTTYKSSCLGLNNRHGNFNVQNPIFSGSVENLVVPVSAMIYPPQLPPFEALDEKPQNLNAQNPPQQQQQHALLDQLYKAAELVGTGNFSHAQGILARLNHQLSPVGKPLQRAAFYFKEALQLLLLMNNPVNPPPPRCPTPCDVIFKMGAYKVFSEISPLIQFVNFTCNQALLEALDDVDQIHIVDFDIGFGAQWASFMQELSLRNQGAPSLKITAFASPSTHYPIELGLMRDNLTQFANDIGISFEFEVVNFDSLNQNSFSLPFSRASENEAIAVNFPLWSSSNQPAMLPSLLRFIKQLSPKIVVSLDRGCDRSDLPFPQHMLQALQSYINLLESLDAINMNSDAINKIERFLLQPRIESTVLGRLRVPQRMPLWKTLFASAGYTPVTFSNFTETQAECVAKRTSVRGFHVEKRQASLVFCWQRRELISASAWRC 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 5898341 5900689 - Cp4.1LG08g07440.1 Cpe08g00744 473710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00744 673 Coils Coil 33 58 - -
Cpe08g00744 673 ProSiteProfiles GRAS family profile. 301 672 IPR005202 -
Cpe08g00744 673 PANTHER SCARECROW-LIKE PROTEIN 6 41 264 - -
Cpe08g00744 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 299 672 IPR005202 -
Cpe08g00744 673 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 264 IPR005202 -
Cpe08g00744 673 Pfam GRAS domain family 311 672 IPR005202 -
Cpe08g00744 673 PANTHER SCARECROW-LIKE PROTEIN 6 299 672 - -
Cpe08g00744 673 MobiDBLite consensus disorder prediction 35 56 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00744 Cpe14g00948 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00671 Cpe-Chr1:3925065 Cpe08g00744 Cpe-Chr8:5898341 2.38E-71 dispersed
Cpe08g00744 Cpe-Chr8:5898341 Cpe17g00396 Cpe-Chr17:2917333 2.67E-144 dispersed
Cpe14g00948 Cpe-Chr14:7988889 Cpe08g00744 Cpe-Chr8:5898341 2.72E-94 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49875 PF03514 GRAS 5.00E-93 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00744 - - csv:101218630 678.322