Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00754 ATGTCGTCTTTTTCCCTTCCCACCACCCCTCCTCCTCCTTCCTCCGACCACCTTTGCTATGTCCATTGCAACATTTGCGACACGGTTTTGGCGGTGAGTGTTCCTTGTGCTAGTTTGTTCAAAACGGTGATCGTCCGTTGCGGCCACTGCGCCAATCTTCTACCGGTCAACATGCGTGGTGGCATGCTTCTCCCTTCTCCCAATCACTTTCATCATACTGCTTTCTTCTCTCCCAATGCTCACAATTTTCTGGAAGAGATCTCAGATCCAAATCCAAATTTTGTGATGAACCAAACCGATGGAATTGATTTGGTGATGGCAACTCGTGTAGGAAACAATGTTCCAAGACCACCCCCAAGCATAAATAAACCTGCAGAAAAGAAACAGAGAGTACCCTCTGCATACAACCGATTCATCAAGGAGGAGATCCAACGCATCAAGGCTGCCAATCCAGACATCTCTCATAGAGAAGCCTTCAGCGCTGCAGCTAAGAATCAGTGGGCTCACTTCCCTCACATACATAATTTTGGTGTTCCTCCTCCCAACAACAACACCAACAACACCAACAACACACCCTAG 579 47.67 MSSFSLPTTPPPPSSDHLCYVHCNICDTVLAVSVPCASLFKTVIVRCGHCANLLPVNMRGGMLLPSPNHFHHTAFFSPNAHNFLEEISDPNPNFVMNQTDGIDLVMATRVGNNVPRPPPSINKPAEKKQRVPSAYNRFIKEEIQRIKAANPDISHREAFSAAAKNQWAHFPHIHNFGVPPPNNNTNNTNNTP 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6069752 6071866 - Cp4.1LG08g07580.1 Cpe08g00754 473720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00754 192 Gene3D High mobility group box domain 115 172 IPR036910 -
Cpe08g00754 192 Pfam YABBY protein 14 174 IPR006780 GO:0007275
Cpe08g00754 192 PANTHER AXIAL REGULATOR YABBY 3 9 189 - -
Cpe08g00754 192 SUPERFAMILY HMG-box 115 167 IPR036910 -
Cpe08g00754 192 PANTHER PROTEIN YABBY 6-RELATED 9 189 IPR006780 GO:0007275
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00754 Cpe13g00219 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01514 Cpe-Chr1:9051093 Cpe08g00754 Cpe-Chr8:6069752 1.27E-12 dispersed
Cpe05g00236 Cpe-Chr5:1339016 Cpe08g00754 Cpe-Chr8:6069752 8.82E-51 dispersed
Cpe07g01105 Cpe-Chr7:9727251 Cpe08g00754 Cpe-Chr8:6069752 1.40E-44 dispersed
Cpe08g00754 Cpe-Chr8:6069752 Cpe11g01064 Cpe-Chr11:8932872 1.80E-44 dispersed
Cpe13g00219 Cpe-Chr13:1656187 Cpe08g00754 Cpe-Chr8:6069752 4.06E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49876 PF04690 YABBY 1.00E-64 CL0114 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00754 K25796 - cmax:111498508 334.724