Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00773 ATGGGAAAATTCTGTATGGAGGTACGAGAAGGGGATGGTGGGAATGGGGTTACGGTGGCGGCTGAGTCAGATCCTTCGAGACCCGACACGACGGCTCCGGTACCGGAAGGTGGTGGTCCTGTAGGTTCTGCGGCTGTGGCGGCGAAGAAGAAGAGGGGTAGGCCGAGGAAGTATGGGCCGGATGGAAAGTTGAATGTGGCGGCGCTGTCACGGAAGGCAATATCAGGGTCGGAACTAGCACTGGCAGTGGCACCGGCGGCGGTGATTGATTTCTCGGCTGCCAAACGGGGGAAAGTGCGGCCGGCGAGTTGGTTGAGCAAAACCAAATATGAAGGGGAGAGTTTAGCCGAATGGGTACCTTGCTCTGTTGGTGGTAATTTTACACCTCATATCATCACTGTCAATTCTGGTGAGGACATAACGATGAAGATTCTCTCATTTTCTCAACAAGGGCCTCGAGCCATATGCATTCTCTCCGCTAATGGTGTGATTTCGAGCGTCACTCTTCGTCAACCGAATTCTTCTGGAGGAACATTAACATATGAGGTGGTAGTAGGAAGCTTTATATCTGGGAACCAACATGAACAAAAATCGAAGAAACTGAAACAAGACATCGTGTTACCGGTTTCAGCTCTTCCGATATCCCCTGTTGAACTGAAGTCATACATGACAACAACGACAACGACAACAACGTCATCATTCCGTGCTGAAACTTGGTCACCTTTAGGGCTAGATTTGAGAAGTCAGCCAACTGATATGAAC 762 50.0 MGKFCMEVREGDGGNGVTVAAESDPSRPDTTAPVPEGGGPVGSAAVAAKKKRGRPRKYGPDGKLNVAALSRKAISGSELALAVAPAAVIDFSAAKRGKVRPASWLSKTKYEGESLAEWVPCSVGGNFTPHIITVNSGEDITMKILSFSQQGPRAICILSANGVISSVTLRQPNSSGGTLTYEVVVGSFISGNQHEQKSKKLKQDIVLPVSALPISPVELKSYMTTTTTTTTSSFRAETWSPLGLDLRSQPTDMN 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6170305 6172139 - Cp4.1LG08g07680.1 Cpe08g00773 473739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00773 254 MobiDBLite consensus disorder prediction 10 59 - -
Cpe08g00773 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 44 182 - -
Cpe08g00773 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 183 254 IPR039605 GO:0003680
Cpe08g00773 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 44 182 IPR039605 GO:0003680
Cpe08g00773 254 CDD DUF296 128 182 IPR005175 -
Cpe08g00773 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 183 254 - -
Cpe08g00773 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 129 175 IPR005175 -
Cpe08g00773 254 ProSiteProfiles PPC domain profile profile. 124 254 IPR005175 -
Cpe08g00773 254 Gene3D - 129 201 - -
Cpe08g00773 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 182 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00773 Cpe-Chr8:6170305 Cpe09g00137 Cpe-Chr9:808107 5.08E-27 dispersed
Cpe13g00201 Cpe-Chr13:1547397 Cpe08g00773 Cpe-Chr8:6170305 2.62E-49 wgd
Cpe14g00855 Cpe-Chr14:7073358 Cpe08g00773 Cpe-Chr8:6170305 2.40E-124 wgd
Cpe05g00281 Cpe-Chr5:1584860 Cpe08g00773 Cpe-Chr8:6170305 3.11E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00773 - - cmos:111448214 388.652