Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00782 ATGAGAAGGGTTCCTCGGCTTTGTTTTTCTTCTCATGCTCTTCTGTTCTTGATTACATTTCTCGTCGGATTTTGCTCCGCCATCACTGAGAAGGACATTTTGCTTCAATTCAAAGATGCTGTTACAGAGGATCCGTTTGATTTCTTGAAAACTTGGGTCGCCGGCGAGGATCATTGCCTGAACTTCAGCGGCGTGTTGTGTAATCCCGATGGTTTTGTGGAGAAGATTGTGCTATGGAACTCCAGCTTGGCTGGAACTTTATCGCCTGCCTTGTCCGGATTGAAGTTCTTGAGGACTTTGACATTGTATGGAAATAGATTTACTGGCAATATTCCAATTGAATATGGCAACATTGTTACTCTGTGGAAGCTGAACTTGAGCTCGAATGCTTTGTCGGGTTCGGTCCCGGAGTTCATTGGCGATTTGCCAAACATTCGGTTTCTAGATTTGTCTAGAAATGGCTTTACAGGGAAGATTCCTTCAGCTGTGTTCAAGAATTGTGTCAAAACTAGATTTGTTTCGTTTTCTCATAACAGATTTTCAGGTATGATTCCTTCAACAATTATGAACTGTTTGAACCTTGAAGGCTTTGATTTCTCAAACAATGATCTAAGTGGGAGTATTCCTTTGCAACTTTGTAACATTCAAAGATTAGAATATGTTTCTGTGAGAAGCAATTCACTTACTGGGAGTGTTCAAGGGCAGTTCTCTGCTTGCCAGAGCTTGAAACTTGTGGATCTTAGTAGCAATTTGTTCACCGGGTCGCCACCGATCGAGGTTCTCGGATTCAAAAACATCACTTATTTTAATGTCTCATATAACATGTTTAATGGGGGAATTGCAGAGCTTGTAGGTTGTAGTGATAATCTGGAAGTTCTTGATGTTTCATGGAATGAATTAGATGGGGAGATCCCATTGAGCATTACGAAGTGTAGGAGCCTTAAAATCTTGGATTTGGAATCTAACAAGCTGGTTGGGAGGATCCCTGCTGAACTTGCAGATTTGAACAAGCTTTTGGTGGTTCGGTTGGGTTATAACTCGATCACCGGGACAGTTCCAGCCATTTTCGGGAACATCGAGCTGCTTCAGGTTTTGAATTTGCACGGTCTTAAACTTGTTGGTGAGATACCTGCTGATATAACCAGTTGCAGGTTTCTTCTTGAGCTGGATATTTCTGGTAATGAATTGGAAGGGGGAATTCCTCAATCTGTTTATAACATGACATACCTTGAAATTCTTGATCTTCATGATAACCATCTGAACGGACTCATTCCGTCGACGCTCGGGAGCCTCTCGAAACTACAGTTTCTGGATCTATCTCGAAATCTACTGTCTGGTTCGATACCTCCTACTCTTGAAAATCTCACATTGCTGCACCATTTCAATGTCTCGTCCAATAACCTTTCAGGCATTATACCTCCCGCCAAGACGATCCAAGGTTTCGGGCCATCTGCATTCTTAAACAATCCTTTTCTTTGTGGTGCTCCCTTGGATCCTTGCTCTGGTAATAACGCCACTGGCACGACTTCCATATCGAAGAAGCCTAAAGTTCTTAGTCTATCTGCAATCATTGCAATTGTAGCAGCAGTTGTGATCCTGGTCGGGGTTTGCGTGATCTCGATTTTGAACCTAATGGCTCGGACAAGGAAGGCGAGGAGCACTGAAATCATTGAGAGCACGCCACTCGGTTCAACCGATTCAGGTATCATAATTGGGAAGCTGGTTCTTTTCAGCAAATCTTTGCCATCGAAGTACGAAGACTGGGAGGCTGGCACCAAAGCGCTGCTCGACAAGGAATGTCTTATAGGGGGTGGCTCTATCGGCACTGTCTACAAGACAAGTTTCGACGTCGGAATCTCCATCGCTGTAAAGAAGCTGGAGACTCTTGGGAGGATCAGAACCCAAGACGAGTTCGAGACAGAAATTGGACGTTTGGGAAACATTAAACACCCGAACTTAGTCGCCTTTCAGGGATACTATTGGTCTTCGTCAATGCAGTTGATTCTATCGGAATTCGTCGTAAATGGCAATCTTTACGACAATTTACACGGTCTGAGTTATCCAGGCACCAGCACAGGCATTGGCAATACAGAGTTACATTGGTCTAGGAGATATCAAATTGCACTTGGAACAGCTAGAGCTCTTGCTTATCTTCACCATGATTGTAAGCCTCCAATTCTTCACCTCAACATAAAATCAACAAACATTCTGTTAGACGAAAACTACGAAGCCAAGTTATCGGATTACGGGTTGGAGAAGTTGCTTCCTGTTATGGACAATTACATCTTAACCAAATACCATACCGCTGTAGGCTACGTCGCACCGGAGTTGGCACAAAGTTTGAGAGTTAGCGAAAAATGCGATGTCTATAGTTTCGGAGTGATTCTACTGGAGTTGGTAACAGGGAGGAAGCCAGTTGAGAGTCCAAGAGCAAACCAGGTAGTGATTTTGTGTGAATATGTAAGGGAGTTGTTGGAGAGTGGTTCGGCTTCTGACTGTTTCGATCGAAACTTACGCGGGATTGCTGAAAGCGAGCTCATTGAAGTGATGAAGTTGGGATTGATCTGTACATCTGAGATCCCTTCAAAGAGACCAAGCATGGCCGAGGTTGTTCAAGTTCTCGAGTCGATAAGAAACGGATTAGGATGA 2649 43.68 MRRVPRLCFSSHALLFLITFLVGFCSAITEKDILLQFKDAVTEDPFDFLKTWVAGEDHCLNFSGVLCNPDGFVEKIVLWNSSLAGTLSPALSGLKFLRTLTLYGNRFTGNIPIEYGNIVTLWKLNLSSNALSGSVPEFIGDLPNIRFLDLSRNGFTGKIPSAVFKNCVKTRFVSFSHNRFSGMIPSTIMNCLNLEGFDFSNNDLSGSIPLQLCNIQRLEYVSVRSNSLTGSVQGQFSACQSLKLVDLSSNLFTGSPPIEVLGFKNITYFNVSYNMFNGGIAELVGCSDNLEVLDVSWNELDGEIPLSITKCRSLKILDLESNKLVGRIPAELADLNKLLVVRLGYNSITGTVPAIFGNIELLQVLNLHGLKLVGEIPADITSCRFLLELDISGNELEGGIPQSVYNMTYLEILDLHDNHLNGLIPSTLGSLSKLQFLDLSRNLLSGSIPPTLENLTLLHHFNVSSNNLSGIIPPAKTIQGFGPSAFLNNPFLCGAPLDPCSGNNATGTTSISKKPKVLSLSAIIAIVAAVVILVGVCVISILNLMARTRKARSTEIIESTPLGSTDSGIIIGKLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGSIGTVYKTSFDVGISIAVKKLETLGRIRTQDEFETEIGRLGNIKHPNLVAFQGYYWSSSMQLILSEFVVNGNLYDNLHGLSYPGTSTGIGNTELHWSRRYQIALGTARALAYLHHDCKPPILHLNIKSTNILLDENYEAKLSDYGLEKLLPVMDNYILTKYHTAVGYVAPELAQSLRVSEKCDVYSFGVILLELVTGRKPVESPRANQVVILCEYVRELLESGSASDCFDRNLRGIAESELIEVMKLGLICTSEIPSKRPSMAEVVQVLESIRNGLG 882
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6229489 6233364 - Cp4.1LG08g07850.1 Cpe08g00782 473748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00782 882 SUPERFAMILY L domain-like 263 499 - -
Cpe08g00782 882 Pfam Protein kinase domain 600 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00782 882 CDD STKc_IRAK 602 877 - -
Cpe08g00782 882 Pfam Leucine rich repeat 388 444 IPR001611 GO:0005515
Cpe08g00782 882 Gene3D Ribonuclease Inhibitor 143 215 IPR032675 -
Cpe08g00782 882 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Cpe08g00782 882 PANTHER UNNAMED PRODUCT 6 880 - -
Cpe08g00782 882 PANTHER - 6 880 - -
Cpe08g00782 882 Gene3D Transferase(Phosphotransferase) domain 1 674 881 - -
Cpe08g00782 882 Gene3D Ribonuclease Inhibitor 216 504 IPR032675 -
Cpe08g00782 882 SUPERFAMILY L domain-like 29 280 - -
Cpe08g00782 882 ProSiteProfiles Leucine-rich repeat profile. 433 456 IPR001611 GO:0005515
Cpe08g00782 882 SMART LRR_typ_2 407 430 IPR003591 -
Cpe08g00782 882 SMART LRR_typ_2 431 455 IPR003591 -
Cpe08g00782 882 SMART LRR_typ_2 142 166 IPR003591 -
Cpe08g00782 882 SMART LRR_typ_2 335 358 IPR003591 -
Cpe08g00782 882 Gene3D Phosphorylase Kinase; domain 1 573 672 - -
Cpe08g00782 882 ProSiteProfiles Protein kinase domain profile. 596 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00782 882 SUPERFAMILY Protein kinase-like (PK-like) 597 875 IPR011009 -
Cpe08g00782 882 Pfam Leucine Rich Repeat 289 311 IPR001611 GO:0005515
Cpe08g00782 882 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00782 Cpe-Chr8:6229489 Cpe13g01035 Cpe-Chr13:8499842 4.94E-168 dispersed
Cpe08g00782 Cpe-Chr8:6229489 Cpe08g01262 Cpe-Chr8:9123959 1.71E-172 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62557 PF00069 Pkinase 5.40E-35 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00782 - - csv:101212415 1546.95