Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00791 ATGGCTGGTCGGATTTTTGAAACTTTGTCATTTGGGTCACAACATGGCCAAAGTAATCAATCTTTGCCATTTTCATCTGGAAATGCATCATTGAAGTTCTTGCTCTTGCATGGTTATTTGGATATTTCTGTCAAGTCAGCCAAGAATCTTCCTAACATGGATATGTTTCATAAGACTCTTGGGGATGTTCTTTCAAAAGTGTCTTTTAAGAGTTCTAAGAACAGTGATGGGCAAAAGGCTCCAAAAGTGACTAGTGATCCTTATGTGACTATCTCTGTATCTGGTGCTGTGATAGGAAGAACTTTTGTGATTGATAATAGTGAGAATCCTGTTTGGATGCAGCATTTTAATGTTCCTGTAGCTCATTATGGTGCTGAAGTGCACTTTGTTGTTAAAGATCATGATGTTGTGGGATCACAAATTATAGGTGTTGTTGCTATTCCTATTGAACAATTGTACTCTGGAGATGTAGTTGAGGGTACCTACCCAATCCTTAATAGTAGCAGGAAGCCCTGCAAGCCTGGGGCTGTCTTGAGTTTGTCGATTCGGTATATTCCGGCAGACCGGGCGGCCATTTTTCACGGTGGAATGTATGCATCTTCTGATCATCAGGGAGTTCCTGGCACATATTTTCCTCTTAGGAAGGGAGGTAAAGTTACATTGTACCAAGATGCTCATGTTGAGGATGGATGTCTTCCTTCAGATTTTAAGCTTCATGGTGGGGTTGAATATGAACATAGGAGCTGTTGGGACGACATCACTGAATCGATTAGCAAAGCTCGTCGTTTGATCTATATTACGGGCTGGTCTGTGTACCATAATGTTAGATTGGTTAGAGATGGAAAGGCGAAAGAATGCAGTTTAGGGGACTTACTCAAAGCTAAGTCTCAAGAAGGTGTACGAGTGTTGCTTCTTATATGGGATGATCCAACTTCGACAAGTATGTTGGGATATAAAACGGAAGCTGGAACCATCTATACCCACCATCAAAAGACAGTGATTGTAGATGCTGATGCTGGCCACCACAAAAGAAAAATTGTAGCTTTTGTTGGAGGTCTCGATTTATGTTTGGGTCGATATGATACTTCGAGGCATCCTCTTTTTCGGACATTGCAAACTACGCACGTAGATGACTTCCACAACCCCAATTTTACGGGACCTGCTACTGGTTGTCCAAGAGAACCATGGCATGATTTGCACTCTAAGATTGATGGTCCAGCAGCATACGACGTCCTAACAAATTTCGAGGAGCGTTGGTTGAGAGCTTCAGAGCCTCGTGGCCTTAAAAAGCTAAAAAGGTTGAATGAAGATGTATTGCTCAAAATTGAAAGAATTCCTGAGATTTTGGGAATTGCTGATGCTGCTCGTTTGTGTAACAATGATCCAGAAGGTTGGAACGTGCAGATTTTTCGATCGATCGACTCGAATTCGGTGAAAGGATTTCCTGAGGACCCGAAAGATGCTATAAGTAGGAACTTGGTATGTGGGAAGAATGTGATGATAGATATGAGTATACATTCAGCATATGTTAATGCAATTCGTGCTGCCCAACGCTTCATTTATATTGAAAATCAGTACTTCCTTGGGTCATCTTATAATTGGAGCGCTCACAAAGACTTGGGGGCTAATAACTTAATACCGATTGAAATTGCCCTTAAAATTGTGGAGAAAATCAAAGCTAAAGAAAGGTTTTCAGCATATGTGGTTATCCCAATGTGGCCAGAAGGTGTTCCTACAAGCACTCCGATTCAAAGAATTCTCTTTTGGCAGAGTAGGACAATGCAAATGATGTACGAAATGATATATACAGCTTTAGTGGAGGTTGGACTTCATGAACAGTATAAGCCTGAAGACTACTTGAATTTCTTTTGCCTTGGAAACCGTGAGGTGATCAGTGAAAGAGATGGCATTGAAGCCGGAAATGGAGAAAAGAATGCTCAATCACTTGTTCGTAAGAGTCGACGTTTTATGATCTATGTTCATTCTAAAGGAATGATAGTAGATGATGAGTATGTCATATTGGGATCCGCAAATATCAATCAGCGATCCCTTGAAGGTACTAGAGACACTGAAATAGCAATGGGTGCGTACCAATCTCGTCATTCTTGGTCGTCAAGCAAACGCTCGAGCCCACGTGGTCAGGTGTATGGATATAGAATGTCATTATGGGCAGAGCACACTGGGACCATGGAGGAATGTTTCGAGAGACCAGAGAGTATTGAATGTGTAAGACGAATCAGATCATTGGGTGAGAGAAACTGGAGACAATATGTTGCTGAGGAAGTGACAGAAATGAGAAGCCATCTTCTTAAATATCCATTGCAAGTTGAGCCAACTGGTAAGGTCACTCATCTTCCTGGTTCTGAGACCTTCCCAGACCTTGGTGGTAACATATTGGGAACATTCATAGCCATCCAAGAGAACCTTACAATTTGA 2436 41.63 MAGRIFETLSFGSQHGQSNQSLPFSSGNASLKFLLLHGYLDISVKSAKNLPNMDMFHKTLGDVLSKVSFKSSKNSDGQKAPKVTSDPYVTISVSGAVIGRTFVIDNSENPVWMQHFNVPVAHYGAEVHFVVKDHDVVGSQIIGVVAIPIEQLYSGDVVEGTYPILNSSRKPCKPGAVLSLSIRYIPADRAAIFHGGMYASSDHQGVPGTYFPLRKGGKVTLYQDAHVEDGCLPSDFKLHGGVEYEHRSCWDDITESISKARRLIYITGWSVYHNVRLVRDGKAKECSLGDLLKAKSQEGVRVLLLIWDDPTSTSMLGYKTEAGTIYTHHQKTVIVDADAGHHKRKIVAFVGGLDLCLGRYDTSRHPLFRTLQTTHVDDFHNPNFTGPATGCPREPWHDLHSKIDGPAAYDVLTNFEERWLRASEPRGLKKLKRLNEDVLLKIERIPEILGIADAARLCNNDPEGWNVQIFRSIDSNSVKGFPEDPKDAISRNLVCGKNVMIDMSIHSAYVNAIRAAQRFIYIENQYFLGSSYNWSAHKDLGANNLIPIEIALKIVEKIKAKERFSAYVVIPMWPEGVPTSTPIQRILFWQSRTMQMMYEMIYTALVEVGLHEQYKPEDYLNFFCLGNREVISERDGIEAGNGEKNAQSLVRKSRRFMIYVHSKGMIVDDEYVILGSANINQRSLEGTRDTEIAMGAYQSRHSWSSSKRSSPRGQVYGYRMSLWAEHTGTMEECFERPESIECVRRIRSLGERNWRQYVAEEVTEMRSHLLKYPLQVEPTGKVTHLPGSETFPDLGGNILGTFIAIQENLTI 811
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6274287 6280943 + Cp4.1LG08g07820.1 Cpe08g00791 473757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00791 811 SMART pld_4 656 683 IPR001736 GO:0003824
Cpe08g00791 811 SMART pld_4 324 359 IPR001736 GO:0003824
Cpe08g00791 811 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 324 359 IPR001736 GO:0003824
Cpe08g00791 811 SMART C2_3c 39 161 IPR000008 -
Cpe08g00791 811 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 656 683 IPR001736 GO:0003824
Cpe08g00791 811 Pfam C2 domain 38 164 IPR000008 -
Cpe08g00791 811 Gene3D C2 domain 25 184 IPR035892 -
Cpe08g00791 811 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 319 811 - -
Cpe08g00791 811 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 36 186 IPR035892 -
Cpe08g00791 811 PANTHER PHOSPHOLIPASE D BETA 1-LIKE 10 321 - -
Cpe08g00791 811 SUPERFAMILY Phospholipase D/nuclease 204 424 - -
Cpe08g00791 811 PIRSF PLD_plant 25 323 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe08g00791 811 PIRSF PLD_plant 318 811 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Cpe08g00791 811 Pfam Phospholipase D Active site motif 325 359 IPR001736 GO:0003824
Cpe08g00791 811 Pfam Phospholipase D Active site motif 657 683 IPR001736 GO:0003824
Cpe08g00791 811 Gene3D Endonuclease Chain A 311 439 - -
Cpe08g00791 811 Pfam Phospholipase D C terminal 731 801 IPR024632 -
Cpe08g00791 811 ProSiteProfiles C2 domain profile. 14 162 IPR000008 -
Cpe08g00791 811 Gene3D Endonuclease Chain A 472 714 - -
Cpe08g00791 811 PANTHER PHOSPHOLIPASE D 319 811 IPR015679 -
Cpe08g00791 811 SUPERFAMILY Phospholipase D/nuclease 505 743 - -
Cpe08g00791 811 CDD C2_plant_PLD 34 185 - -
Cpe08g00791 811 PANTHER PHOSPHOLIPASE D 10 321 IPR015679 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00791 Cpe-Chr8:6274287 Cpe17g00327 Cpe-Chr17:2226890 0 dispersed
Cpe08g00791 Cpe-Chr8:6274287 Cpe12g00003 Cpe-Chr12:10623 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00791 K01115 - csv:101208016 1484.93