Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00812 | ATGGGGAGGACTGATGATAACGTTGCTATAATTGGGGATTGGGTACCTCCAAGTCCCAGTACACGAGCCTTCTTCTCAGCAATGCTAGGGGAGGATGTTGGTTCTAGACCTGCAATGGATACTATCACCATTGATAAAACTGAAGAGCTATTTCAAAGGCCTCGAGAACATCCGGTATCGAACAACACCGTTGCAAGAGGCGGGATCCCGAGTGCCAATTCTGGTGATCGGTCGATGGATTTAAGTTCGTTTTCGGGGCAGAAATTCCGTGGGGGTCTTGTGGAAAGGATTGCAGCCAGAGCTGGATTTAATGCTCCAAGATTGAATACGGAGAGTATTAGATCCACTGATCAATCTCTGGATTCAGATGCCAAGTCTCCTTACTTGACAATACCGCCTGGTCTCAGTCCTACTACATTGCTAGATTCACCTGTTTTTCTTTCTAATTCACTGGCTCAGCAATCTCCCACAACTGGAAAGTTCCCGTTCTTGCCGAATGTTAGTAATCGGAGCTCGATGATGATGTCAGAGGGCGACGATAAAGGCAGCGACAATCCATTCAACAATAACAGTACATCGTTTGCATTCAGTTCTGGTGTGGAATCTGGATCGTTCTTTTATGTCGGTGCAGCAAGCAAAACAGATTCTGCCACTGTTCTTCCACAATCTTGTCCAAGAATTGAGGTTTCAGTTCCACGTTCAGAAAATTATTTTCAATCTCATCTTGTAGAACCATCTCTGTCTTTACCTCAAAACAGAATCAGTCATCATCCGCAAGTGGGACTCTCTACGTCATGCGTCGAGAGGGATGATGTGGGTAAGACCGTGTCAGATGATCAAAGAACCTTTGATTCTTTGTGTGGTGGTGGTGAACATTCTTCACCACTCGATGAGCAACCGGATGAAGGGGAGCAAAGAGGCAGTGGGGATTCTATGGCTGGTGGTGGTAGTGGCGCTCCCTCGGAGGATGGATATAACTGGAGAAAATATGGACAAAAACAGGTTAAAGGAAGCGAGTACCCTCGTAGTTATTATAAGTGCACGCATCCAAACTGTCAGGTCAAGAAAAAAGTCGAGCGATCTAATGAGGGTCATATAACAGAGATCATCTATAAAGGAACACATAATCACCCAAAGCCCTCGCCCTATCGACGAGCTGCGACCGGACCTTCGGATTCCCATATCAATATGCAACTAGACATCTCTGCACAAGGTGGCGAACAGACTGCTGAAGGTCTCCTTTGGGGAGATTCACAGAAACGGATTCCAAATGGAGCTCCTGATTGGATGCATGAGAACCTTGAGGTGACTTCTTCAGCATCCTTGGGTCCTGAATATGGCAATCAGCCTAATACTTCACAGGCTCAAAATGGCAGTCATGTTGAAACAGTTGAAGCCATTGATGCCTCATCCACATTCTCTAATGATGAAGATGAAGATGATAGGGGCACCCATGGCAGTGTAACATTGGGATATGAGGGGGAAGGAGATGAGTCTGAGTCTAAGAAAAGGAAACTTGACGCTTATGTAACGGAAATGAGCGGGGCCACTAGAGCTATCCGTGAGCCTAGAGTTGTCGTGCAGACTACCAGCGAAGTAGATATTCTGGACGATGGCTATCGCTGGCGCAAATACGGGCAGAAGGTTGTAAAAGGAAATCCAAATCCTAGGAGTTACTACAAGTGCACAAATCCTGGCTGCACAGTGAGGAAGCATGTCGAGCGGGCATCACATGACCTGAAGTCTGTGATCACGACATACGAAGGAAAGCACAATCATGATGTTCCTGCTGCTCGCAACAGCAGCCACATCAATTCCAGTACATCCAGTCCAGTAACCACACAAAACTCGACCGCAACGACTCAAACTCATATTCACAGGCCGGGGCCACCCCAGCCTCAGAACACCATTCCAAGATTTGAAAGGCCAGGGTTTAGCCTTCCTGGAAGACAGCAGATGGGCAGTGCCCATGGGTTCTCTTTTGGAATGAACCAACCTGGACTGAGAAATCTGACAATGGCAGCCGTTGGCCAAGCCAAGCTTCCTGTTCTGCCAATGCATCCATACTTAGCACAAGCACACCATGTTAATGACATGGGTTTCTTGTTGCCTAAAGGAGAGCCCAATGTAGAACCTACATCTGACCTTGGCTTGAACTTTTCCCATGGTTCAACCGTGTATCAGCAAATTATGAGTAGGCTTCCACTTGGACCTGAGATGTGA | 2223 | 47.01 | MGRTDDNVAIIGDWVPPSPSTRAFFSAMLGEDVGSRPAMDTITIDKTEELFQRPREHPVSNNTVARGGIPSANSGDRSMDLSSFSGQKFRGGLVERIAARAGFNAPRLNTESIRSTDQSLDSDAKSPYLTIPPGLSPTTLLDSPVFLSNSLAQQSPTTGKFPFLPNVSNRSSMMMSEGDDKGSDNPFNNNSTSFAFSSGVESGSFFYVGAASKTDSATVLPQSCPRIEVSVPRSENYFQSHLVEPSLSLPQNRISHHPQVGLSTSCVERDDVGKTVSDDQRTFDSLCGGGEHSSPLDEQPDEGEQRGSGDSMAGGGSGAPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSNEGHITEIIYKGTHNHPKPSPYRRAATGPSDSHINMQLDISAQGGEQTAEGLLWGDSQKRIPNGAPDWMHENLEVTSSASLGPEYGNQPNTSQAQNGSHVETVEAIDASSTFSNDEDEDDRGTHGSVTLGYEGEGDESESKKRKLDAYVTEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARNSSHINSSTSSPVTTQNSTATTQTHIHRPGPPQPQNTIPRFERPGFSLPGRQQMGSAHGFSFGMNQPGLRNLTMAAVGQAKLPVLPMHPYLAQAHHVNDMGFLLPKGEPNVEPTSDLGLNFSHGSTVYQQIMSRLPLGPEM | 740 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6472290 | 6476034 | - | Cp4.1LG08g08130.1 | Cpe08g00812 | 473778 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00812 | 740 | SUPERFAMILY | WRKY DNA-binding domain | 528 | 596 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | Pfam | WRKY DNA -binding domain | 537 | 593 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | Pfam | WRKY DNA -binding domain | 322 | 378 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | Gene3D | WRKY domain | 315 | 381 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | MobiDBLite | consensus disorder prediction | 58 | 80 | - | - | |
Cpe08g00812 | 740 | MobiDBLite | consensus disorder prediction | 598 | 630 | - | - | |
Cpe08g00812 | 740 | MobiDBLite | consensus disorder prediction | 590 | 637 | - | - | |
Cpe08g00812 | 740 | SMART | WRKY_cls | 536 | 595 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | SMART | WRKY_cls | 321 | 379 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | ProSiteProfiles | WRKY domain profile. | 316 | 380 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | PANTHER | WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 | 107 | 692 | - | - | |
Cpe08g00812 | 740 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 107 | 692 | IPR044810 | GO:0003700 | |
Cpe08g00812 | 740 | MobiDBLite | consensus disorder prediction | 471 | 504 | - | - | |
Cpe08g00812 | 740 | MobiDBLite | consensus disorder prediction | 275 | 327 | - | - | |
Cpe08g00812 | 740 | ProSiteProfiles | WRKY domain profile. | 531 | 596 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | Gene3D | WRKY domain | 523 | 589 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00812 | 740 | SUPERFAMILY | WRKY DNA-binding domain | 320 | 380 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe04g00677 | Cpe-Chr4:6812437 | Cpe08g00812 | Cpe-Chr8:6472290 | 6.60E-15 | dispersed | |
Cpe08g00812 | Cpe-Chr8:6472290 | Cpe08g00850 | Cpe-Chr8:6729186 | 1.64E-95 | dispersed | |
Cpe18g00254 | Cpe-Chr18:4198269 | Cpe08g00812 | Cpe-Chr8:6472290 | 7.52E-113 | transposed | |
Cpe14g00818 | Cpe-Chr14:6556851 | Cpe08g00812 | Cpe-Chr8:6472290 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49879 | PF03106 | WRKY | 3.00E-24 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00812 | K18835 | - | csv:101207853 | 1213.36 |