Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00818 CAAGAAGCAGCAAAGGAATCAATTTTGTACTCCTATACGAGATCTTTCAACGGTTTTGCAGCCATACTCAACGAGAAAGAAGCAGCAGATTTAGCGAGAAGCCCACAAGTGATATCAGTGTTGGAAAACAGAGGGAGAAAATTGCATACAACAAACTCATGGCGTTTTCTTGGGGTGGAAGATGATGAAGGAATCCCTTCCAATTCCATTTGGAATGCTGCACAGTTTGGTCGAGATATGATCATAGCCAACATTGACACAGGCGTTTGGCCAGAATCAAAGAGTTTTAGCGACGAAGGGTATGGACCCGTCCCATCAAAGTGGCAAGGCACGTGTCCAGATGACCCGAGCTTCCGTTGCAATAGGAAGCTGATTGGAGGAAGGTATTTCTACAAAGGATATAAATTCGCCGGAGGCGTTCTCAACGCCACTTTTGATTCCATACGCGACCACAATGGACATGGGACCCACACACTCTCCACTGCCGCCGGCAACTTCGTCCCCGGAGCCAACATTTTCGGCCATGGTAACGGCACGGCCAAAGGCGGCGCTCCAAAAGCCCGCGTCGCCGCCTACAAGGCCTGCTGGCCTCTCATACCCGAAGGAGAGTGCTTCGATGCCGATGTCCTCGCCGCCTTCGAAGCCGCCATCAACGACGGAGTCGACGTCATATCCGCTTCCCTCGGTGGAGGCGACCAAGAATTCTTCAGAGATCCTGTTGCTATGGCTGCCTTCCACGCCGCTCAACAAGGCATCATCGTCGTCTTCTCCGCTGGTAATGACGGTCCTAAACCGGAAACCGTCGGCAACGTTGCGCCGTGGGAGATCACCGTCGCTGCGAGCACCACCGGGAGGAATTTCGTCAGTAACGTCGTCCTTGGAAATAACAAAATCCTAAAGGGCTCGAGCCTTTCGTCAGTTTCCGCATTACCACAGTTCTATCCATTAATCGATTCTGTGGATGCGAAATTCAGCAACGTCAACGAGTTCCAAGCGAAATTTTGCGGCGAGGGAACGCTTAATCCGAAGAAGGTAAAGGGGAAGATCTTGATTTGCACTGCAGGGAAGATTACAGGAGTTGAGAAGGGTTACAATGCTGCGGAAGCAGGTGCTGTGGGGATGATTTTGGCTACCAACATTGACAATCTGGACGAAATCAAACCTGAGTTGTATTTCCTTCCAGCTTCGGGTATAACCTATTCCGATGGCGAATTGCTTGACGATTACATCAACTCCACCAGTACACCAGTGGCTCAGATAATGAACGTAAGAACAGAGGTGGAACTAAATCCATCTCCGGTCGTTGCTGCATTCTCATCCAGAGGTCCCAATCCGTTCGAGAAGGCCATCCTCAAGCCCGACATAACAGCTCCGGGTTTTACCATATTAGCGTCTTACCCCACCACAATAGCCCCAACCCGTTCAGGCTTCGACCAACGGCGCACCCCCTTCAATGTATTCTCCGGTACCTCCATGGCCTGCCCTCACGTCTCTGCCATCGCCGCCCTTCTCAAGTCCATTCATCCCGAATGGAGCCCTGCTGCAATTAAGTCTGCCCTTATGACCACGGCCAAAACAAGCGACGACAACAACAACAACGACTTGCTGCTCAATGCCACCCCATTCGCTCTTGGTGCAGGACATGTTCGTCCAAATGATGCAATGGATCCTGGCCTTGTATATGATATTACTGCCGATGAGTACTTGAATTTCTTGTGTGCTCGAGGCTACGATGCAATTCAACTTAGGAGATTCAGTAAGCAGCCATTTGTTTGTGAGAAATCATTCAAAGCCATAGATCTCAACTACCCATCCATCTCAATTCCAAATCTAAACGTGAATGCTCCGGTGACAATCAATAGAAGAGTTAAGAATGTGGGATATCCAGGGACATACGTGGCCCGAGTCGAGGTACCAGAGGGGGTTGCAGCATCGGTTGAGCCAAGTACGTTGCAGTTTAGCAGTGTGGGTGAAGAGAAAGCATTCAGGGTTGTAGTGCAAAACACGGGAGAATTGAAACATGAAGGTTATGTGTTCGGGAAATTGATATGGTCCGACGGAAAGCATTCAGTAGGAAGTCCCATCTCAATGAAATCTACGATGCGATTGACATGA 2115 49.79 QEAAKESILYSYTRSFNGFAAILNEKEAADLARSPQVISVLENRGRKLHTTNSWRFLGVEDDEGIPSNSIWNAAQFGRDMIIANIDTGVWPESKSFSDEGYGPVPSKWQGTCPDDPSFRCNRKLIGGRYFYKGYKFAGGVLNATFDSIRDHNGHGTHTLSTAAGNFVPGANIFGHGNGTAKGGAPKARVAAYKACWPLIPEGECFDADVLAAFEAAINDGVDVISASLGGGDQEFFRDPVAMAAFHAAQQGIIVVFSAGNDGPKPETVGNVAPWEITVAASTTGRNFVSNVVLGNNKILKGSSLSSVSALPQFYPLIDSVDAKFSNVNEFQAKFCGEGTLNPKKVKGKILICTAGKITGVEKGYNAAEAGAVGMILATNIDNLDEIKPELYFLPASGITYSDGELLDDYINSTSTPVAQIMNVRTEVELNPSPVVAAFSSRGPNPFEKAILKPDITAPGFTILASYPTTIAPTRSGFDQRRTPFNVFSGTSMACPHVSAIAALLKSIHPEWSPAAIKSALMTTAKTSDDNNNNDLLLNATPFALGAGHVRPNDAMDPGLVYDITADEYLNFLCARGYDAIQLRRFSKQPFVCEKSFKAIDLNYPSISIPNLNVNAPVTINRRVKNVGYPGTYVARVEVPEGVAASVEPSTLQFSSVGEEKAFRVVVQNTGELKHEGYVFGKLIWSDGKHSVGSPISMKSTMRLT 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6526441 6530149 + Cp4.1LG08g08170.1 Cpe08g00818 473784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00818 704 Gene3D - 284 427 - -
Cpe08g00818 704 Pfam PA domain 331 406 IPR003137 -
Cpe08g00818 704 Pfam Fibronectin type-III domain 600 696 IPR041469 -
Cpe08g00818 704 Gene3D - 572 700 - -
Cpe08g00818 704 SUPERFAMILY Subtilisin-like 48 559 IPR036852 GO:0004252|GO:0006508
Cpe08g00818 704 Pfam Peptidase inhibitor I9 3 49 IPR010259 -
Cpe08g00818 704 ProSiteProfiles Serine proteases, subtilase domain profile. 53 555 - -
Cpe08g00818 704 CDD PA_subtilisin_like 290 420 - -
Cpe08g00818 704 CDD Peptidases_S8_3 47 524 IPR034197 -
Cpe08g00818 704 SUPERFAMILY PA domain 336 414 IPR046450 -
Cpe08g00818 704 ProSitePatterns Serine proteases, subtilase family, serine active site. 489 499 IPR023828 -
Cpe08g00818 704 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 49 IPR037045 -
Cpe08g00818 704 PRINTS Subtilisin serine protease family (S8) signature 150 163 IPR015500 -
Cpe08g00818 704 PRINTS Subtilisin serine protease family (S8) signature 77 96 IPR015500 -
Cpe08g00818 704 PRINTS Subtilisin serine protease family (S8) signature 488 504 IPR015500 -
Cpe08g00818 704 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 699 IPR045051 -
Cpe08g00818 704 Gene3D Peptidase S8/S53 domain 79 568 IPR036852 GO:0004252|GO:0006508
Cpe08g00818 704 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 699 - -
Cpe08g00818 704 Pfam Subtilase family 77 533 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00818 Cpe-Chr8:6526441 Cpe14g00800 Cpe-Chr14:6353968 0 dispersed
Cpe08g00816 Cpe-Chr8:6490241 Cpe08g00818 Cpe-Chr8:6526441 1.90E-94 proximal
Cpe14g00807 Cpe-Chr14:6378313 Cpe08g00818 Cpe-Chr8:6526441 1.03E-118 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00818 - - cmo:103491001 978.008