Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00825 ATGTTAGCTGTTGCTTTCTTCGGCCTCGAATTTCGTTCTGGAAGGTTTCAAGTTGGTACGAGAATGTCGGAGAGTTTTGCTTACAAGAGCGTGAAGATTGTAATCTTCTCAAATAAACTCAACTTCCTTATGTCTTTTGGGCCGCTAGCAATTCTTGTGGATAAGTTGACTGGACACAATAGTTGGGTCTTCTTCCTGAGTCTATTGGGTATCATACCGTTCGCTGAGCGGTTAGGTTATGCGACAGAGCAGCTGGCTTTTTACACTGGGCCTACAGGTGTTGTAAAATATCTGCAACTGCAAAAATGTTCTTTTTGCACTGTAACTCCTGGTGCTGATTCATCTGTTGCCATTAGTCTACTGAACGAGTACAATCCTCAGAAGGGGAGGGAGAGGGGGAGGGAGGGTTCTGTCGTAGTGTACTATATACAAATTATCGTAGTTGTGAAAATCTCAAGTGTATTTGTTGGCGGTCTACTAAATGCTACTTTTGGAAATGCAACAGAACTCATCATATCAATTTTTGCACTGAAAAATCAAATGATACGTGTTGTTCAGCTATCCTTGCTAGGCTCAATTCTGTCGAACATGTTGCTGGTGCTTGGTTGTGCGTTCTTCTGTGGTGGGCTTGTTTTCAACAAAAAGGAACAGACTTTTAACAAGGCAGCTGCTGGTGTCAACTCAGGATTGTTGTTAATGGCTGTCATGGGCCTTCTTTTTCCTGTTCTTCTCAACTACACCCACAGCGAAGCCCATTTTGGGAAGTCGGAATTGGCACTTTCTAGATTCAGCAGTTGCATTATGCTTCTGGCTTATGCTGCTTTTCTTTTCTTTCAGTTAAAAAGTCAGAGGAATAATTATTCTTCCGTTTATGAGGTTGATTATGTTATTTTTGTTCTTTCTTTGAAGTTATGCATCATCATGGAAGATAATTTTAATCCACGTTCTATTGAGCTGCAAGTTCAGGAAGAAACTCGGAGTGAAGAAATCTCAGATGAAGATGAAGCTCCTGAGATCACCAAGTGGGAATCAGTTATCTGGCTATCAATTTTGACTGCCTGTATCTCTGTTCTATCAGAATACTTGGTCGATGCAATCGAAGTTGCATCTGAATCATTGAAAATCCCAGTGTCGTTTATTAGTGTTATACTGCTTCCGATTGTAGGGAATGCTGCTGAGCATGCAAGCGCTGTTATGTTTGCTATGAAAGATAAGCTTGTAAGCTTTAGAACATATTATCCATCCAAATTCCTTGTGATGGAAAAACGGACTGATGCGATCTCTAGTTTCTTGGCAGGATATTTCTCTGGGTGTAGCTATCGGATCATCAACCCAGATATCTATGTTCGGGGTAAGTAA 1359 40.99 MLAVAFFGLEFRSGRFQVGTRMSESFAYKSVKIVIFSNKLNFLMSFGPLAILVDKLTGHNSWVFFLSLLGIIPFAERLGYATEQLAFYTGPTGVVKYLQLQKCSFCTVTPGADSSVAISLLNEYNPQKGRERGREGSVVVYYIQIIVVVKISSVFVGGLLNATFGNATELIISIFALKNQMIRVVQLSLLGSILSNMLLVLGCAFFCGGLVFNKKEQTFNKAAAGVNSGLLLMAVMGLLFPVLLNYTHSEAHFGKSELALSRFSSCIMLLAYAAFLFFQLKSQRNNYSSVYEVDYVIFVLSLKLCIIMEDNFNPRSIELQVQEETRSEEISDEDEAPEITKWESVIWLSILTACISVLSEYLVDAIEVASESLKIPVSFISVILLPIVGNAAEHASAVMFAMKDKLVSFRTYYPSKFLVMEKRTDAISSFLAGYFSGCSYRIINPDIYVRGK 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6579625 6582679 - Cp4.1LG08g08250.1 Cpe08g00825 473791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00825 452 Gene3D - 151 291 IPR044880 -
Cpe08g00825 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 92 IPR004713 GO:0006812|GO:0008324|GO:0016021
Cpe08g00825 452 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 16 92 - -
Cpe08g00825 452 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 155 407 - -
Cpe08g00825 452 Pfam Sodium/calcium exchanger protein 62 280 IPR004837 GO:0016021|GO:0055085
Cpe08g00825 452 Pfam Sodium/calcium exchanger protein 345 405 IPR004837 GO:0016021|GO:0055085
Cpe08g00825 452 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 155 407 IPR004713 GO:0006812|GO:0008324|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g01322 Cpe-Chr5:9283872 Cpe08g00825 Cpe-Chr8:6579625 5.22E-24 dispersed
Cpe08g00825 Cpe-Chr8:6579625 Cpe02g01752 Cpe-Chr2:14286057 5.67E-18 dispersed
Cpe08g00825 Cpe-Chr8:6579625 Cpe16g00366 Cpe-Chr16:5336225 2.75E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00825 K07300 - twl:119990568 386.341