Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00826 ATGGCTTCCACGGCGAAGGAACAATCCACCATAGCTTCCTCCAACTCCGACGACGGCCAAGAACAACAACACTACGCTTATGCTGCGCAATTGGTTACCTCAACGGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCCGGCGATGGGGCCGAGCTGTCTCCGATCGAGATAGCCTCTAAGATAACCATGTCGAACCTGGATGCAGCGTCGATGATCGATCGGATCCTGAGGCTTCTGGCGGCCCACTCCGTGGTGGGGTGCTCGGTGATCATTGATGAATATAGGAATCATCAAAGATTGTATAGCCTCACGCCCGTGGCTAAGTATTTTGTTCTTAACGAACATGGCGTATCGTTGGGTGCTATTTTATCGTTGATCCAAGACAAAGTCTCGCTCCAAAGCTGGAGTGAGCTCAAAAACGCTGTGATCGAAGGAGGAGTTCCATTCAATAGGGCTCATGGGGGACTTCATGCCTTTGAATACCCTCGCTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCAATGATAAATAACACTGCCACGACCATCAAGACAGCCGTCAAATGTTACAACGGCTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGCGGCCTTGGGTTCACCCTTAAAATCATCACGTCTGCATACCCTTCAATCAAAGGCATCAACTTCGACTTGCCTTATGTCATTAAAGATGCACCGTCCTATCCATATGACGGGAAGGTAATCGTGATGGAAGGAGTGGTTTCGACGGTGTCGGAGACCACGGACGCAGCCAAAGCCGTCATCCAATGCGATATTCTTATGATGACTCAAAGCATAGGAGGAAAGGAGCGAACTCGCGATGAATTTAAAGCCCTTGCAACCAAAGCTGGCTTTAAACACATCAAATTCGTCTGTTTCGAACAGTCAACCANACACTACTCTTACGCTGCGCAATTGGTTACCTCATCAGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCCGCTAAGATAACCACCTCGAACCCGGATGCAGCGTCGTTGATCGATCGGATCCTGAGGCTTCTGGCGGCCCACTCGGTGGTGGGATGCTCGGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGTCTTACGCCGGTGGCTAAGTATTTTGTTCTTAACGAAGATGGCCTGTCGTTGGGTCCTATTTTATCGATGATTCAAGATAAAGTCATTCTCCATAGCTGGAGTGAGCTGAAAAATGTTGTGATTGAAGGAGGAGTTCCATTCAATAGGGCTCATGATGGACTTCATCTCTTTGAATACAATGGTTTGGATCAAAGATTTAATCAAGTTTTCAACAATGCGATGATAAATCACACCACCATGGTTATCAAGATAGCTGTTGAGTCCTATAACGGCTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGTCTCGGGGTCACCCTTAAAATCATCACGTCTGCATATCCTTCAATCAAAGGCATCAACTTTGACTTGCCTCATGTCATTCAAGATGCACCATCCTATCCACGTGTAGAACATGTAGGAGGAGACATGTTTGAGAAAATTCCAAACGGAGATGCTATTTTCGTGAAGTGGATACTTCACGATTGGAGTGACGACCATTGTGTGAAGCTGTTGAAAAATTGCTATGTCGCCATCCCGGACGACGGGAAGGTCATTGTGATGGAGGGAGTGGCTCCAACGGTGCCGGAGACCACAGCCGCAGCGAAAGTCGTCATCCAAGGCGATGTGCTTATGATGACTCAAAGCATAGAAGGAAAGGAGCGAACTCGGGATGAATTTAAAGCCCTCGCAACCAAAGCTGGCTTTAAACACATCAAATTCGTTTGTTTCCTAAGCAATTATTGGATCATAGACCTTCTATCTTCTACACCAACCATTAAAAAAGTTGCTGCTGCAGCCTCAGCTTCTCCTCCTCATCACAGAGCTCCGGCGATGGCTTCCACGGCGAAGGAACGCTCAACTGTGGCTTCCTCCAACTCCGACGACGGCCAAGAACAACAACACTACTCTTACGCTGCGCAATTGGTTACCTCATCAGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTTGGCTTGTTTGAGATCTTGGCCAAGGCTGGCGATGGGGCCGAGCTGTCTCCGACTGAGATAGCCACTAAGATAACCACCTCGAACCCGGATGCTGCGTCGATGATCGATCGGATCCTGAGGCTTATGGCGGCCCACGCGGTGGTGGGGTGCTCTGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCCTTGCGCCGGTGGCTAAGTATTTTGTTCCGAATGAAGATGGCGTGTCGTTGGGTCCTATTGTATCGATGATCCAAGATAAAGTCTTTCTTCATAGCTGGAGTGAGCTCAAGAATGCTGTGATTGAAGGGGGAGTTCCATTCAATAGAGCTCATGGGGGAGTTCATGCCTTTGAGTACCCTCGCTTGGATCAAAGATTTAATCAAGTTTTCAACAACGCAATGATAAACTACTCCACTACGGCCATCAAGGCCGTTGTCAAGTGCTACAACGGTTTTGCAAACCTCAAGCAACTGGTTGATGTTGGTGGTGGCCTCGGGGTCACCCTTAAAATCATCACGTCTGCATACCCTTCAATCAAAGGCATCAACTTCGATTTGCCTCATGTTATTCAAGATGCACCTTCCTATCCAGGTGTGGAACACGTAGGAGGAGACATGTTCGAGAAAGTTCCCGAGGGAGATGCTATTTTCATAAAGTGGATACTTCACGATTGGAGTGACGAACATTGCGTGAAGCTACTGAAAAATTGCTACGCTGCGATCCCGGACGATGGAAAGGTAATCGTGATGGAGGGAGTGCTTCCAACGGTGCCTGAGACCTCAGAAGCAGCTAAAGGCATCATCCAAGGCGATGTGCTTATGATGACTCAAAACCCAGGAGGAAAGGAGCGAACTCTTGCTGCTGCAACCTCAGCTTCCCCTCCTCATCACACAGCTCCGGCGATGGGTTCCACGGCGGAGGAACAGTCAACCATAGTTTCCTCCATCTCCGACGACGGCCAACAACACCAACATTTCGCTTACGCTATGCAATTGGTTACCTCATCAGTTCTGCCGATGACACTCCAAGCAGCCTTCGAGCTCGGCTTGTTTGAGATCTTGGCCAAGGCCGGCAATGGGGCCGAGCTGTCTCCGACTGAGATAACCGCTAAGTTAACCACCTCAAACCCGGATGCAGCGTCGATGATCGATCGGATCCTGAGGCTTCTGGCGGCCCACTCGGTGGTGGGATGCTCGGTGATCATTGATGAAAATGGGAATCAGCAGAGATTGTATAGCCTTACGCCGGTGGCTAAGTATTTTCTTCTCGATGAAGATGGCGTGTCATTGGGTGCTTTGTTATCGATGATTCAAGATAAAGTCTTTCTCGAGAGCTGGAGTGAGCTGAAGAATGGTGTGATCGAAGGAGGAATTCCATTCAATAGAACCCATGGAGGAGTTCATGCCTTTGAATACCCTCGCTTGGATCAAAGATTCAATCAAGTTTTCAACAACGGAATGATAAATCACACCACCATGGTCATCAAGGTAGTTGTCGAGTCCTACAACGGCTTTGCAAACCTCAAGCAACTAGTTGATGTTGGTGGTGGCCTCGGAGTCACCCTTAAAATCATCACGTCTGCATACCCTTCAATCAAAGGTATCAACTTCGACTTGCCTCATGTCATTCAAGATGCACCATCCTATCCAGGTGTAGAACACGTTGGAGGAGACATGTTTGAGAAACTGTTGAAAAATTGCTACGCCGCCATCCCGGACGACGGGAAGGTAATCGTGATGGAGGGAGTGGTTCCAACAGTGCCTGAGACAACAGCCGCAGCGAAAGCCATCGGCCAAGGCGATATGCTTATGATGACTCAAAACCCAGGAGGAAAGGAACGAACTCGCGATGAGTTTAAAGCCCTTGCAACCAAAGCAGGGTTTAAACACGTCAAA 4113 48.6 MASTAKEQSTIASSNSDDGQEQQHYAYAAQLVTSTVLPMTLQAAFELGLFEILAKAGDGAELSPIEIASKITMSNLDAASMIDRILRLLAAHSVVGCSVIIDEYRNHQRLYSLTPVAKYFVLNEHGVSLGAILSLIQDKVSLQSWSELKNAVIEGGVPFNRAHGGLHAFEYPRLDQRFNQVFNNAMINNTATTIKTAVKCYNGFANLKQLVDVGGGLGFTLKIITSAYPSIKGINFDLPYVIKDAPSYPYDGKVIVMEGVVSTVSETTDAAKAVIQCDILMMTQSIGGKERTRDEFKALATKAGFKHIKFVCFEQSTXHYSYAAQLVTSSVLPMTLQAAFELGLFEILAKAGDGAELSPTEIAAKITTSNPDAASLIDRILRLLAAHSVVGCSVIIDENGNQQRLYSLTPVAKYFVLNEDGLSLGPILSMIQDKVILHSWSELKNVVIEGGVPFNRAHDGLHLFEYNGLDQRFNQVFNNAMINHTTMVIKIAVESYNGFANLKQLVDVGGGLGVTLKIITSAYPSIKGINFDLPHVIQDAPSYPRVEHVGGDMFEKIPNGDAIFVKWILHDWSDDHCVKLLKNCYVAIPDDGKVIVMEGVAPTVPETTAAAKVVIQGDVLMMTQSIEGKERTRDEFKALATKAGFKHIKFVCFLSNYWIIDLLSSTPTIKKVAAAASASPPHHRAPAMASTAKERSTVASSNSDDGQEQQHYSYAAQLVTSSVLPMTLQAAFELGLFEILAKAGDGAELSPTEIATKITTSNPDAASMIDRILRLMAAHAVVGCSVIIDENGNQQRLYSLAPVAKYFVPNEDGVSLGPIVSMIQDKVFLHSWSELKNAVIEGGVPFNRAHGGVHAFEYPRLDQRFNQVFNNAMINYSTTAIKAVVKCYNGFANLKQLVDVGGGLGVTLKIITSAYPSIKGINFDLPHVIQDAPSYPGVEHVGGDMFEKVPEGDAIFIKWILHDWSDEHCVKLLKNCYAAIPDDGKVIVMEGVLPTVPETSEAAKGIIQGDVLMMTQNPGGKERTLAAATSASPPHHTAPAMGSTAEEQSTIVSSISDDGQQHQHFAYAMQLVTSSVLPMTLQAAFELGLFEILAKAGNGAELSPTEITAKLTTSNPDAASMIDRILRLLAAHSVVGCSVIIDENGNQQRLYSLTPVAKYFLLDEDGVSLGALLSMIQDKVFLESWSELKNGVIEGGIPFNRTHGGVHAFEYPRLDQRFNQVFNNGMINHTTMVIKVVVESYNGFANLKQLVDVGGGLGVTLKIITSAYPSIKGINFDLPHVIQDAPSYPGVEHVGGDMFEKLLKNCYAAIPDDGKVIVMEGVVPTVPETTAAAKAIGQGDMLMMTQNPGGKERTRDEFKALATKAGFKHVK 1371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6584025 6597933 - Cp4.1LG08g08220.1 Cpe08g00826 473792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00826 1371 SUPERFAMILY Winged helix DNA-binding domain 1060 1161 IPR036390 -
Cpe08g00826 1371 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 707 1025 - -
Cpe08g00826 1371 SUPERFAMILY Winged helix DNA-binding domain 20 122 IPR036390 -
Cpe08g00826 1371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 812 1026 IPR029063 -
Cpe08g00826 1371 MobiDBLite consensus disorder prediction 680 706 - -
Cpe08g00826 1371 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 249 314 - -
Cpe08g00826 1371 SUPERFAMILY Winged helix DNA-binding domain 707 810 IPR036390 -
Cpe08g00826 1371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1069 1371 IPR016461 GO:0008168
Cpe08g00826 1371 MobiDBLite consensus disorder prediction 1019 1041 - -
Cpe08g00826 1371 SUPERFAMILY Winged helix DNA-binding domain 318 417 IPR036390 -
Cpe08g00826 1371 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Cpe08g00826 1371 Pfam Dimerisation domain 726 777 IPR012967 GO:0046983
Cpe08g00826 1371 Pfam Dimerisation domain 1079 1130 IPR012967 GO:0046983
Cpe08g00826 1371 Pfam Dimerisation domain 334 385 IPR012967 GO:0046983
Cpe08g00826 1371 PANTHER O-METHYLTRANSFERASE 249 314 IPR016461 GO:0008168
Cpe08g00826 1371 PANTHER O-METHYLTRANSFERASE 1061 1369 IPR016461 GO:0008168
Cpe08g00826 1371 PANTHER O-METHYLTRANSFERASE 707 1025 IPR016461 GO:0008168
Cpe08g00826 1371 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 1061 1369 - -
Cpe08g00826 1371 Gene3D - 1044 1160 IPR036388 -
Cpe08g00826 1371 Gene3D - 691 807 IPR036388 -
Cpe08g00826 1371 Gene3D - 317 415 IPR036388 -
Cpe08g00826 1371 Gene3D - 3 120 IPR036388 -
Cpe08g00826 1371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 324 664 IPR016461 GO:0008168
Cpe08g00826 1371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 259 IPR016461 GO:0008168
Cpe08g00826 1371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1166 1371 IPR029063 -
Cpe08g00826 1371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 716 1056 IPR016461 GO:0008168
Cpe08g00826 1371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 421 660 IPR029063 -
Cpe08g00826 1371 PANTHER O-METHYLTRANSFERASE 318 661 IPR016461 GO:0008168
Cpe08g00826 1371 Pfam O-methyltransferase domain 1301 1368 IPR001077 GO:0008171
Cpe08g00826 1371 Pfam O-methyltransferase domain 249 306 IPR001077 GO:0008171
Cpe08g00826 1371 Pfam O-methyltransferase domain 1185 1300 IPR001077 GO:0008171
Cpe08g00826 1371 Pfam O-methyltransferase domain 832 1025 IPR001077 GO:0008171
Cpe08g00826 1371 Pfam O-methyltransferase domain 440 646 IPR001077 GO:0008171
Cpe08g00826 1371 Pfam O-methyltransferase domain 145 248 IPR001077 GO:0008171
Cpe08g00826 1371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 313 IPR029063 -
Cpe08g00826 1371 PANTHER O-METHYLTRANSFERASE 20 248 IPR016461 GO:0008168
Cpe08g00826 1371 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 318 661 - -
Cpe08g00826 1371 PANTHER CAFFEIC ACID 3-O-METHYLTRANSFERASE 1-LIKE 20 248 - -
Cpe08g00826 1371 Gene3D Vaccinia Virus protein VP39 249 316 IPR029063 -
Cpe08g00826 1371 Gene3D Vaccinia Virus protein VP39 1162 1371 IPR029063 -
Cpe08g00826 1371 Gene3D Vaccinia Virus protein VP39 809 1031 IPR029063 -
Cpe08g00826 1371 Gene3D Vaccinia Virus protein VP39 417 664 IPR029063 -
Cpe08g00826 1371 Gene3D Vaccinia Virus protein VP39 122 248 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00826 Cpe-Chr8:6584025 Cpe09g00009 Cpe-Chr9:41343 2.39E-74 dispersed
Cpe08g00826 Cpe-Chr8:6584025 Cpe15g00615 Cpe-Chr15:6843429 7.50E-12 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00826 K13066 - csv:101214916 526.554