Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00850 | ATGGACCCCACTGATGCCGACCTCGCCGATCCTTCTCATGTCCGCCTTTCCGTTTCCTCTGAACCTTCCTCCGCCTCCGCTGCTGGCGCCAAGTACAAGCTACTGTCTCCGGCTAAGCTCCCGATCTCCAGGTCCCCTTGCATTACCATCCCTCCCGGTCTCAGTCCCACTTCCTTTCTCGAGTCTCCCGTTTTGCTCACCAACTTAAAGGTAGAGCCTTCTCCGACTACCGGGTCCTTTACTAAGCTTCCAATGGCACACGACTCTTCTAGCTCAGCTATTTATTCAATGACCACCATGGCTTTCTCAAATACGCATGCCTCAGACGAAGGAAGATCCAGCTATTTCGAGTTCAAACCTTATGCTGGACCGAATATGGTTCCTGCAGATTTGAGTCATCGGAAAGGCGAACAATCCAGAGAAGTTCAAGTTCAGGGCCAACCTCAACCATTTACTGCTCCGCCCATGACTAAAAGTGAGATCAACGTCAATTCTAATGATTTGAGTCGGTCGATTCAGATGGATACAGTTGCCTCGAGGGCTAGTGTTCCTGAAGTTGATGGAGACGATTTCAACCATAGTTTGAACACAAATACCAGGGTTCAGCCCCAACAATCTGATCCAAAAGCCAGTGGCATTCAAGTAGTTTCTGATAGGTTATCTGATGATGGATATAACTGGCGTAAGTATGGACAGAAGCATGTTAAAGGGAGTGAATTTCCGCGTAGCTATTATAAATGTACCCATCCTAACTGTGAAGTGAAAAAACTCTTCGAACGCTCTCACGATGGACAGATAGTCGATATTATCTATAAGGGTACCCATGATCATCCTAAACCTCAGCCAAGTCGGCGATATTCTGCCAGTGCTTCGATGAATGTTCAAGAAGATGGGCCTGATAAGCCTTCACCTTTAACTGGTCAAGATGACAGGTCCTGCGTAATATATGCTCGGGCGGTGCGTACCATTGAGCCAAATGGAACTCCAGAACCATCCCATGCTGCTAACGATAGCATGGCCGAAGGCGTAGGAACAACTCTGCCACCCAGGAGTCATGATGAGGTTGACGATGATGACATATTCTCGAAGCGGAGGAAAATGGAACTTGGAGGTTTTGATGTCTGCCCAATGGTTAAGCCGATCAGGGAACCACGTGTTGTGGTTCAAACTCTAAGCGAGGTTGATATACTGGATGATGGGTATCGCTGGCGTAAATACGGCCAGAAGGTAGTGAGAGGAAACCCGAACCCAAGGAGTTATTACAAGTGCACAAATGTTGGATGCCCTGTTAGAAAACATGTTGAAAGAGCATCCCATGACCCAAAAGCTGTTATAACTACATACGAGGGGAAACATAATCACGACGTTCCCACAGCAAAAACGAGTAGCCATGAGGTCCAAGGCTCATTGACAATTGCACCATCAAGGTACAGACTTGAAGAGAGTGACACCATAAGCCTTGATCTTGGCGTTGGCATTGGCGCCGGTGGTGAGAATAGATCGAACGAATACAGGCAGGCATTTCATTCTCAACTTGCTGAAAACCAAAATCCAAATGGCAATTTCAACTTCGAAATAGTTCAAGAAAACTCACCCCCAGCCTATTTCGGTGTTCTCGATCGGGGTATAAGCCAGCACGGATCAAGAGAGAGTTTAAGCGAAAGCCGCACCATGTCGCTAAACCATTCGTCTCACCCATATCCTCCTAGCATTGAGAGAATACTAACAGGGCCATAA | 1737 | 47.27 | MDPTDADLADPSHVRLSVSSEPSSASAAGAKYKLLSPAKLPISRSPCITIPPGLSPTSFLESPVLLTNLKVEPSPTTGSFTKLPMAHDSSSSAIYSMTTMAFSNTHASDEGRSSYFEFKPYAGPNMVPADLSHRKGEQSREVQVQGQPQPFTAPPMTKSEINVNSNDLSRSIQMDTVASRASVPEVDGDDFNHSLNTNTRVQPQQSDPKASGIQVVSDRLSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQIVDIIYKGTHDHPKPQPSRRYSASASMNVQEDGPDKPSPLTGQDDRSCVIYARAVRTIEPNGTPEPSHAANDSMAEGVGTTLPPRSHDEVDDDDIFSKRRKMELGGFDVCPMVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNVGCPVRKHVERASHDPKAVITTYEGKHNHDVPTAKTSSHEVQGSLTIAPSRYRLEESDTISLDLGVGIGAGGENRSNEYRQAFHSQLAENQNPNGNFNFEIVQENSPPAYFGVLDRGISQHGSRESLSESRTMSLNHSSHPYPPSIERILTGP | 578 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6729186 | 6736106 | - | Cp4.1LG08g08540.1 | Cpe08g00850 | 473816 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00850 | 578 | SUPERFAMILY | WRKY DNA-binding domain | 389 | 457 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | Gene3D | WRKY domain | 384 | 450 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | Gene3D | WRKY domain | 206 | 281 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | ProSiteProfiles | WRKY domain profile. | 216 | 280 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 195 | 212 | - | - | |
Cpe08g00850 | 578 | ProSiteProfiles | WRKY domain profile. | 392 | 457 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 18 | 553 | IPR044810 | GO:0003700 | |
Cpe08g00850 | 578 | SUPERFAMILY | WRKY DNA-binding domain | 218 | 280 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 546 | 578 | - | - | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 546 | 566 | - | - | |
Cpe08g00850 | 578 | Pfam | WRKY DNA -binding domain | 222 | 278 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | Pfam | WRKY DNA -binding domain | 398 | 454 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | SMART | WRKY_cls | 397 | 456 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | SMART | WRKY_cls | 221 | 279 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 272 | 357 | - | - | |
Cpe08g00850 | 578 | PANTHER | WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED | 18 | 553 | - | - | |
Cpe08g00850 | 578 | MobiDBLite | consensus disorder prediction | 195 | 215 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00812 | Cpe-Chr8:6472290 | Cpe08g00850 | Cpe-Chr8:6729186 | 1.64E-95 | dispersed | |
Cpe08g00850 | Cpe-Chr8:6729186 | Cpe14g00818 | Cpe-Chr14:6556851 | 5.11E-94 | dispersed | |
Cpe11g00361 | Cpe-Chr11:1979817 | Cpe08g00850 | Cpe-Chr8:6729186 | 1.55E-12 | dispersed | |
Cpe02g01138 | Cpe-Chr2:10375710 | Cpe08g00850 | Cpe-Chr8:6729186 | 3.23E-91 | transposed | |
Cpe04g00677 | Cpe-Chr4:6812437 | Cpe08g00850 | Cpe-Chr8:6729186 | 1.17E-82 | transposed | |
Cpe05g00995 | Cpe-Chr5:6508052 | Cpe08g00850 | Cpe-Chr8:6729186 | 1.30E-65 | transposed | |
Cpe14g00767 | Cpe-Chr14:6036846 | Cpe08g00850 | Cpe-Chr8:6729186 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49883 | PF03106 | WRKY | 3.30E-25 | CL0274 | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00850 | - | - | bhj:120090463 | 1010.36 |