Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00851 ATGCAAGAAGCTTCAAGAAAGAAGGTTTCAGATCAATCTCACAGGTTCTATGAACAGCCACAGCAAGAACCTGGATCCTATTACTGGCCTCCTATCAACCAAAATCACTTACCATCTGAGGCTTTCAACCCATATTGCAACCTTGAGTCGTCCTTGGGAACTAGCAGTTACCCACCTCAAAATTCTTCTTCTACTGTTAGCTTCACATCTAATGGAAGCCCTTCACACCAAGAGTGCCATTCATACCCGTTAGAACCGTATTATTCTCCCGACCACAACCGTGGCTCGCCTGTCAGTAGATCTTGCTTAACAGATGATGCTGATGATGACTTGAGGCACAAGATCAGGGAATTGGAGATTGCAATCCTTGGACCTGATTCAGAGATGTTTGATATCTATTCTGTCTCTAATCCAGTCAATCCTGTGTTATCTGAGCAAGAAGCAGGGTGGAAAGATGTGGCTGAGATAATCTCTAGAAGGGATTTGAAAGAGATGCTTTGTGCTTGTGCTCGAGCAATAGGAGAAAATGATATGTTGGCTGGAGAATGGTTGATATCTGAGTTACGTGGAATGGTCTCGGTTTCGGGTGAGCCAATCCAACGTTTAGGAGCTTACTTGTTAGAGGCACTTGTTGCAAGGACAGCCTCTTCAGGTAGTACTATCTATAAAGCACTAAGATGTAAAGAGCCTATAGGCTCTGAATTGCTCTCATACATGAACATTCTCTATGAAGTTTGCCCTTATTTCAAGTTCGGGTACCTATCAGCAAATGGGGCAATTGCTGAAGCCATAAAAGGTGAAAATAGAGTTCACATAATTGATTTCCAGATAGGTCAGGGAAATCAGTGGATGACATTGATGCAAGCTCTTGCGAATCGGCCTGGAGGGCCCCCAAAGATTACTATCACAGGGATAGATGATTCTACTTCAGCATTTTCTCGAGGAGGGGGCGTCGAGATTGTAGCGAAAAGGTTGTCGAATTTGGCAGAGTCATTGATGGTACCCTTTGAGTTCCATGGAATTGCAGGCTCTGCTTCCGAAATTCAACTAGAAGATCTAAAAGTTCAACCAGGTGAGGCCATTGCTGTGAATTTTGCCTTGGTGCTACACCATATGACAGATGAAAGTGTTGGCAGTCCGAATCATCGAGATCGAATCCTGCGACTCGTCAAGAGCCTGTCTCCAAAAGTTGTGACCGTTGTCGAGCAAGAGTCGAACAACAATACAGCTCCCTTTTTTCCCCGTTTTCTCCAAACATTGAACTATTATACTGCCATTTTCGAGTCCATAGATATGACTCTTCCAAGAGAGCACAAGGAACGGATCAATGTCGAACAGCACTGTTTAGCTCGGGACATCGTTAATATAGTAGCATGTGAGGGAGCCGAAAGAGTCGAACGTCATGAACTTCTTGGAAAGTGGAGATCACGGTTCCTCATGGCAGGGTTTGAGCCACACCCTTTAAGCCCTTTTGTCAACTCTACAATTGAAGCACTGCTAAAGAACTACTGTGACAAGTACACGCTAGAAGAAAGGGATGGGGCCCTATATCTTGGCTGGTTGAATCAAAACCTGGTTACCTCTAGTGCTTGGATATGA 1599 44.4 MQEASRKKVSDQSHRFYEQPQQEPGSYYWPPINQNHLPSEAFNPYCNLESSLGTSSYPPQNSSSTVSFTSNGSPSHQECHSYPLEPYYSPDHNRGSPVSRSCLTDDADDDLRHKIRELEIAILGPDSEMFDIYSVSNPVNPVLSEQEAGWKDVAEIISRRDLKEMLCACARAIGENDMLAGEWLISELRGMVSVSGEPIQRLGAYLLEALVARTASSGSTIYKALRCKEPIGSELLSYMNILYEVCPYFKFGYLSANGAIAEAIKGENRVHIIDFQIGQGNQWMTLMQALANRPGGPPKITITGIDDSTSAFSRGGGVEIVAKRLSNLAESLMVPFEFHGIAGSASEIQLEDLKVQPGEAIAVNFALVLHHMTDESVGSPNHRDRILRLVKSLSPKVVTVVEQESNNNTAPFFPRFLQTLNYYTAIFESIDMTLPREHKERINVEQHCLARDIVNIVACEGAERVERHELLGKWRSRFLMAGFEPHPLSPFVNSTIEALLKNYCDKYTLEERDGALYLGWLNQNLVTSSAWI 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6729502 6731100 + Cp4.1LG08g08510.1 Cpe08g00851 473817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00851 532 Pfam GRAS domain family 163 531 IPR005202 -
Cpe08g00851 532 MobiDBLite consensus disorder prediction 15 33 - -
Cpe08g00851 532 PANTHER GIBBERELLIN-RESPONSIVE PROTEIN, PUTATIVE-RELATED 32 531 - -
Cpe08g00851 532 MobiDBLite consensus disorder prediction 1 33 - -
Cpe08g00851 532 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 531 IPR005202 -
Cpe08g00851 532 ProSiteProfiles GRAS family profile. 153 532 IPR005202 -
Cpe08g00851 532 MobiDBLite consensus disorder prediction 48 100 - -
Cpe08g00851 532 MobiDBLite consensus disorder prediction 48 78 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00851 Cpe14g00825 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe06g00888 Cpe-Chr6:5925360 Cpe08g00851 Cpe-Chr8:6729502 3.41E-143 dispersed
Cpe08g00851 Cpe-Chr8:6729502 Cpe14g00768 Cpe-Chr14:6042419 0 dispersed
Cpe08g00851 Cpe-Chr8:6729502 Cpe16g00391 Cpe-Chr16:5492187 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49884 PF03514 GRAS 5.80E-131 CL0063 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00851 - - csv:101220072 906.746