Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00861 ATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGATGATAGCTGCAACAGTATTGGCTCGGATGCCCCTTCATCGGTCGTGCAAGACCGGATGATTATTGTGGGGAATCAGCTCCCGATTCGGGCACATCGAGATGAGAATGGAGATTGGGAGTTTAGTATGGATGAGGATTCACTTCTTTTACAGCTTAAAGATGGGCTTGGAGAAGATGTGGAGGTGATTTATATTGGTTGTTTAAGAGAGGAGGTCGATCCAAGGGAGCAAGATGAGGTTGCACAAACGCTTTTGGACCGATTCAAATGTGTCCCGACATTCCTCCCTCCCGAGCTTTTTAGTAAATTTTACCATGGATTCTGTAAGCAACATTTATGGCCATTGTTTCACTATATGCTTCCTCTTTCGCCTGATCTTGGTGGTCGATTTGATAGGTCGTTATGGCAAGCTTATCTTTCGGTTAATAAGATATTTGCAGATAAAGTTATGGAAGTGATTAGCCCTGATGATGACTTTGTTTGGGTTCATGATTATCATTTGATGGTTTTGCCAACATTTTTGAGGAAGAGGTTTAACAGGGTGAAGCTCGGATTCTTCCTACACAGTCCGTTTCCTTCGTCTGAGATTTATCGAACGCTTCCCGTTAGAGATGAACTTCTTCGGGCACTATTGAACTCTGATCTTATTGGCTTCCATACATTTGATTATGCTAGGCACTTTTTATCTTGCTGCAGTAGAATGCTTGGTCTGTCTTATCAATCTAAGCGAGGTTACATCGGGCTTGAATACTACGGTCGTACTGTGAGTATTAAGATTCTTCCTGTCGGTATTCATATCGGTCAGCTCCAAAATGTTTTAAATCTCCCCGAGACTGTTTCGAAAGTTGCAGAATTGCAAAATCGGTTCAAAGGTCAAACGGTTTTGCTTGGGGTTGATGATATGGACATATTTAAAGGGATCAGCCTGAAACTTTTGGCATTTGAACAATTGCTCCGACAACATCCCGAGAGATGGGGTAAAGCTGTGTTAGTACAGATAGCGAACCCTGCACGAGGTAGAGGGAAAGATGTACAGGAAGTTGTGGCTGAAACTACTGCGACCGTGAATAGGATTAATGCAACATTCAGGAGGCCGGGATATGAGCCTGTGGTTTTGATTAACACTCCCTTGCAGTTTTTCGAGCGAATTGCATACTATTCGATTGCTGAGTGCTGCTTGGTCACTGCAGTGAGAGATGGGATGAATCTCATACCTTACGAGTATATTATATGTCGACAAGGCAACGAGAAGCTCGACAATGTTCTTGAGCTAAATCCTTCAACTGCAAAGAAGAGCATGATAGTGCTGTCTGAGTTTATTGGGTGTTCCCCGTCCCTCAGCGGAGCTATTCGGGTTAACCCATGGAATATTGAAGCTGTCACCGAAGCAATGGATTCTGCCCTGGTAATCCCTGAGGCGGAAAAGCAATTGCGACATGAAAAACATTATAGGTACGTTAGTACACACGATGTTGCGTACTGGGCGCGCAGCTTTTTGCTGGATCTGGGCAGGGCATGTCGAGACCATTCAATGAGGAGATGTTGGGGTATAGGTTTTGGCTTAGGATTTCGAGTGATCGCTCTGGATCCAAATTTCAGGAAGCTTTCAGTTGATCATATTGTTTCGGTTTATAAGAGAACCTGCCACCGGGCGATCTTGTTAGATTATGATGGTATCATGATGCTTCCTGGCTCGATTAGCATGAATCCAACTGCTGAAGCCCTTGGGATCTTGAATAACTTGTGTAAAGATCCTAAGAACGTCGTGTTCCTTGTTAGCGGAAAGGACCGAAAAACTCTGACGGAATGGTTTTCACCGTGCGAAAAGCTTGGACTAGCTGCAGAACATGGTTTCTACCTTAGGCCAAATCATGCTGCAGATTGGGAGACATCTGTAAGTGTGACAGATTTCGACTGGAAACAGATTGCCGAACCCGTTATGCAACTGTACACCGAGACGACGGATGGTTCTACAATCGAAACTAAAGAGAGCGTTCTTGTTTGGAACTACCTTTACGCGGATCCTGATTTCGGATCGTGCCAGGCTAAGGAACTTTTAGATCACCTTGAAAGTGTTCTTGCTAATGAGCCAGTTTCTGTCAAGAGTGGCCAACACATTGTAGAAGTCAAACCTCAGGGTGTAAACAAGGGTATTGTAGCAGAATATCTCTTGCAAACAATGAGGGAGAAGGGAATGCTTCCTGATTTCGTTCTATGCATCGGAGACGATAGGTCGGACGAGGATATGTTCGAGGTGATAACGAGTGCAAAACCCACCCTTCCTCCCAATGCTGAAGTGTTCGGTTGCACGGTCGGGCAGAAACCAAGCAAGGCTAAGTATTACTTGGAAGACACACACGAAATCTTGAGAATGTTACAAGGTCTCACCCATGCGTCCGAGCATGCCGCTCGAGCCACCGCACAGACGACGCCTCATAGAGTGATTATTCTTTACGGCGACCCCGAGAGCTGCGGCGGCGCGTATCTGAATGTTGTCCAATCCTCCATTCCGGCCGGCGGCTGCACGGAACTTTGCTCCAAAACTAACACCGTTTGTGGTATTCTGTCAACGATTCTTCTTCTTCCTCTTCGTTCACTTTTCTTTGTCATTGATTTCGGTTCGGTTTGTGCGGTTGCGAACTTGATGGATTCAAGTATTGCTATTGGCATCGTAATTCTCAGTATCAGCTTGATTTTGAGTCGTGTCCTTTATGTTTTATATTGGAGCGGTAGGGCCCTTCCAAACAAAAGCTTGGGATCTGTCAGTACCCTCATTGTCTTAGGCTCAGGGGGTCACACGGCCGAAATGCTCAATGTGTTGTCTGTGCTGCAGAAAGACTCGTTTTCTCCAAGATTCTACATTGCTGCTGCTGCTACCGATGACATGAGTCTTCAAAAAGCTCGCACATATGAACATCAACTGGCTCATAAGATTCTCTGCAATGGCCCTGGTACCTGTATCCCATTATGCGCAATTGCATTCACATTCAAGGTTGTGGGGATTAGATGGTCATCAATTTTTTATGTGGAAAGCATTGCAAGAGTGAAGAGATCATCATTGAGTGGGTACATTTTATACAAGTTGCACATGGCTGATCGGTTCTTTGTGCAATGGCCACAACTGCAGAGAAAATATCCCCACGCTCACTACGTTGGTTGTCTCATGTAG 3300 45.21 MVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSCNSIGSDAPSSVVQDRMIIVGNQLPIRAHRDENGDWEFSMDEDSLLLQLKDGLGEDVEVIYIGCLREEVDPREQDEVAQTLLDRFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYLSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQNVLNLPETVSKVAELQNRFKGQTVLLGVDDMDIFKGISLKLLAFEQLLRQHPERWGKAVLVQIANPARGRGKDVQEVVAETTATVNRINATFRRPGYEPVVLINTPLQFFERIAYYSIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDNVLELNPSTAKKSMIVLSEFIGCSPSLSGAIRVNPWNIEAVTEAMDSALVIPEAEKQLRHEKHYRYVSTHDVAYWARSFLLDLGRACRDHSMRRCWGIGFGLGFRVIALDPNFRKLSVDHIVSVYKRTCHRAILLDYDGIMMLPGSISMNPTAEALGILNNLCKDPKNVVFLVSGKDRKTLTEWFSPCEKLGLAAEHGFYLRPNHAADWETSVSVTDFDWKQIAEPVMQLYTETTDGSTIETKESVLVWNYLYADPDFGSCQAKELLDHLESVLANEPVSVKSGQHIVEVKPQGVNKGIVAEYLLQTMREKGMLPDFVLCIGDDRSDEDMFEVITSAKPTLPPNAEVFGCTVGQKPSKAKYYLEDTHEILRMLQGLTHASEHAARATAQTTPHRVIILYGDPESCGGAYLNVVQSSIPAGGCTELCSKTNTVCGILSTILLLPLRSLFFVIDFGSVCAVANLMDSSIAIGIVILSISLILSRVLYVLYWSGRALPNKSLGSVSTLIVLGSGGHTAEMLNVLSVLQKDSFSPRFYIAAAATDDMSLQKARTYEHQLAHKILCNGPGTCIPLCAIAFTFKVVGIRWSSIFYVESIARVKRSSLSGYILYKLHMADRFFVQWPQLQRKYPHAHYVGCLM 1099
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6802020 6811412 + Cp4.1LG08g08650.1 Cpe08g00861 473827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00861 1099 CDD HAD_TPP 595 831 - -
Cpe08g00861 1099 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 846 IPR001830 GO:0003824|GO:0005992
Cpe08g00861 1099 Pfam Oligosaccharide biosynthesis protein Alg14 like 1020 1098 IPR013969 GO:0006488
Cpe08g00861 1099 Pfam Oligosaccharide biosynthesis protein Alg14 like 968 1019 IPR013969 GO:0006488
Cpe08g00861 1099 Gene3D Glycogen Phosphorylase B; 57 314 - -
Cpe08g00861 1099 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 550 - -
Cpe08g00861 1099 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 797 IPR006379 -
Cpe08g00861 1099 TIGRFAM T6PP: trehalose-phosphatase 593 840 IPR003337 GO:0003824|GO:0005992
Cpe08g00861 1099 Pfam Glycosyltransferase family 20 63 546 IPR001830 GO:0003824|GO:0005992
Cpe08g00861 1099 Gene3D Glycogen Phosphorylase B; 315 531 - -
Cpe08g00861 1099 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 846 - -
Cpe08g00861 1099 Gene3D - 723 855 IPR023214 -
Cpe08g00861 1099 Gene3D - 593 710 IPR023214 -
Cpe08g00861 1099 CDD GT20_TPS 63 546 IPR001830 GO:0003824|GO:0005992
Cpe08g00861 1099 Pfam Trehalose-phosphatase 597 829 IPR003337 GO:0003824|GO:0005992
Cpe08g00861 1099 SUPERFAMILY HAD-like 594 839 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00071 Cpe-Chr1:426969 Cpe08g00861 Cpe-Chr8:6802020 0 dispersed
Cpe02g00653 Cpe-Chr2:4020471 Cpe08g00861 Cpe-Chr8:6802020 3.88E-122 dispersed
Cpe04g00803 Cpe-Chr4:7586345 Cpe08g00861 Cpe-Chr8:6802020 0 dispersed
Cpe08g00861 Cpe-Chr8:6802020 Cpe14g00973 Cpe-Chr14:8231859 0 dispersed
Cpe14g00972 Cpe-Chr14:8225304 Cpe08g00861 Cpe-Chr8:6802020 3.07E-78 dispersed
Cpe18g00836 Cpe-Chr18:7720004 Cpe08g00861 Cpe-Chr8:6802020 0 dispersed
Cpe08g00861 Cpe-Chr8:6802020 Cpe01g00950 Cpe-Chr1:5627484 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00861 K16055 - csv:101207192 1665.59