Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00881 | ATGAGTAGCAGTGAGATGGAGAAACCACCCAAAGACAAGGAGACCAAGACACCGCCGCTTACCACCCAGGAGCAGACTTCAACCACTAGCGCTGGCGCAGTTAATCCTGATTGGTCGGGATTTCAGGCATATTCTCCAATGCCTCCGCATGGTTTCTTGGCATCAAGCCCCCAAGCCCACCCATATATGTGGGGAGTTCAGCATATTATGCCTCCTTATGGCACGCCTCCACATCCATATGTTGCAATGTACCCCCCTGGTGGCATATATGCTCATCCTTCCATTCCTCCGGGATCGTATCCTTTTAGCCCATTTGCAATGCCCTCTCCAAATGGCATCACTGAGGCCTCTGGTAATACAGCAGGCAGCTTAGATGGGGAGGGTAAGCCACCTGAAGTGAAGGAAAAGCTTCCAATTAAAAGATCAAAAGGAAGTTTGGGCAGTTTGAACATGATTACGGGGAAGAACAATGAGCTCGGTAAAACATCTGGAACATCTGCCAATGGAGCATACTCTAAAAGTGGTGAGAGTGCTAGCGAAGGTACAAGTGAAGGAAGCGATGCCAATTCTCAAAATGAATCACAACCTAAGTTAGGTTCCAGGCAAGACACTTTGGAAGGTGAAGCATCTCAGAACGGCAACTCCATGCATGGTACTCAAAATGGAGGATCTAATACTCAGGCAATGACTGTCATTCCATTGGCTGCTGCTGGGGCCCCGGGAGTCATTCCTGGTCCCACGACCAACTTAAATATTGGAATGGACTATTGGGGTGCATCATCCGCTATCCCTGCAATGCATGGAAAGGTTCCATCAACTCGAGTAGCTGGAGGATTAGTTGGATCTCGGGATAGTGTACAGTCACAGCTTTGGTTGCAGGATGAGAGAGAGCTTAAAAGACAGAGAAGAAAGCAATCAAATAGAGAATCTGCACGGCGATCCCGGTTACGCAAGCAGGCAGAGTGTGATGAACTAGGACACCGAGCTGAAGCCTTACAAGAAGAAAATGCCAGTCTTAGGTCTGAAGTGAACCGGATAAGGAGTGAATATGAACAATTACTTTCAGAGAATACTTCTCTGAAGGAACGACTCGGTGAAGTTACGGGAAACGAAGAAGTAAGGGCCAGCAGGAACGGCCAGCATTCGAGTAACGAAACCACACAACTTACAGAGTCGGAGGTTGTACAAGTTGGTATCAAGAATTGA | 1206 | 47.84 | MSSSEMEKPPKDKETKTPPLTTQEQTSTTSAGAVNPDWSGFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPPGGIYAHPSIPPGSYPFSPFAMPSPNGITEASGNTAGSLDGEGKPPEVKEKLPIKRSKGSLGSLNMITGKNNELGKTSGTSANGAYSKSGESASEGTSEGSDANSQNESQPKLGSRQDTLEGEASQNGNSMHGTQNGGSNTQAMTVIPLAAAGAPGVIPGPTTNLNIGMDYWGASSAIPAMHGKVPSTRVAGGLVGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELGHRAEALQEENASLRSEVNRIRSEYEQLLSENTSLKERLGEVTGNEEVRASRNGQHSSNETTQLTESEVVQVGIKN | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6961788 | 6967227 | - | Cp4.1LG08g08860.1 | Cpe08g00881 | 473847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00881 | 401 | Pfam | bZIP transcription factor | 295 | 357 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | SUPERFAMILY | Leucine zipper domain | 298 | 354 | IPR046347 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | SMART | brlzneu | 295 | 359 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Cpe08g00881 | 401 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 396 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Cpe08g00881 | 401 | CDD | bZIP_plant_GBF1 | 300 | 350 | IPR045314 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 302 | 317 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | Coils | Coil | 315 | 363 | - | - | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cpe08g00881 | 401 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 297 | 360 | IPR004827 | GO:0003700|GO:0006355 | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 357 | 401 | - | - | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 111 | 226 | - | - | |
Cpe08g00881 | 401 | Pfam | Disordered region downstream of MFMR | 135 | 261 | - | - | |
Cpe08g00881 | 401 | Pfam | G-box binding protein MFMR | 1 | 96 | IPR012900 | - | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 146 | 226 | - | - | |
Cpe08g00881 | 401 | Gene3D | - | 298 | 368 | - | - | |
Cpe08g00881 | 401 | PANTHER | BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN | 1 | 396 | - | - | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 373 | 395 | - | - | |
Cpe08g00881 | 401 | MobiDBLite | consensus disorder prediction | 19 | 36 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g00881 | Cpe-Chr8:6961788 | Cpe19g00799 | Cpe-Chr19:6026592 | 1.73E-66 | dispersed | |
Cpe14g00989 | Cpe-Chr14:8347870 | Cpe08g00881 | Cpe-Chr8:6961788 | 0 | wgd | |
Cpe05g00154 | Cpe-Chr5:801123 | Cpe08g00881 | Cpe-Chr8:6961788 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49890 | PF16596 | MFMR_assoc | 9.00E-51 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00881 | K09060 | - | csv:101206627 | 711.449 |