Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00897 ATGTTTACATGCATAGCATGTACGAAACAGACAGACGACGGGGGTGAGGATGGGGCTGCGCGTGGGAGTGGCACGCCTAGTACAAAGGAAGCCGTCAAAAGCCTGACAACGCAGATCAAGGACATGGCGTTGAAATTCTCTGGTGCTTATAGGCAGTGCAAACCCTGTACAGGCTCCAGTAGCTATAAGAAAGGACAGAGACCTTACCCAGATTTTGACACTGCTTCAGAAGGGGTTCCATACCCCTACATAGGAGGGGCAAGTGCAAGTTCAACACCTGCCTGGGACTTCCCTCCTGTCAATCGCCACCCACATACGAGATCTGACTCGAGATTTAAAGGGGTGTTCAGAGGAGACCAGACCCCTGGAGCCGATTCCACCATATCAGCATGTGATGTGGTGCTTGAGGATGAGGATGAGCCGAAAGAGTGGATGGCACAGGTGGAGCCTGGTGTTCACATTACTTTTGTGTCCCTACCCAATGGAGGCAATGATTTAAAACGAATTCGTTTCGATCGAGAAATGTTTAACAAATGGCAAGCTCAGCGATGGTGGGGCGAAAACTATGACAGAATAACGGAGCTCTATAATGTCCAGAGATTCAACCAACAAGCTCTTCATACGCCACCAAGAACTGAGGATGAGAGGGATTCTTCCTACTCAAAGATGGAAAGGGATAGCCCAATGACTGCAGCGAACAAAGATTGGGCACTGAAAAACCACAAACCTTCAGGAAGTAAAGGTTATTTCCCATCTGACCAGCATTTTGATCATGGAAGCAGCCACCACTATGCAGGGTCAAGTGCCTATCCAACCGGGGGCGCCAAAGGCGACATGTCATCTATGGAAGCCTCACGCACAACTACCTCTTCTAGAGACGAACCTTCAATTTCCGTTAGCAATGCAAGCGACATCGAGGCCGAATGGGTCGAGGAAGACGAACCAGGAGTCTACATAACAATCAGGCAGCTTGTTGATGGCTCTAGAGAGCTTCGTCGTGTCAGATTCAGGTAA 1014 49.31 MFTCIACTKQTDDGGEDGAARGSGTPSTKEAVKSLTTQIKDMALKFSGAYRQCKPCTGSSSYKKGQRPYPDFDTASEGVPYPYIGGASASSTPAWDFPPVNRHPHTRSDSRFKGVFRGDQTPGADSTISACDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFDREMFNKWQAQRWWGENYDRITELYNVQRFNQQALHTPPRTEDERDSSYSKMERDSPMTAANKDWALKNHKPSGSKGYFPSDQHFDHGSSHHYAGSSAYPTGGAKGDMSSMEASRTTTSSRDEPSISVSNASDIEAEWVEEDEPGVYITIRQLVDGSRELRRVRFR 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7081373 7086768 + Cp4.1LG08g08920.1 Cpe08g00897 473863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00897 337 MobiDBLite consensus disorder prediction 281 303 - -
Cpe08g00897 337 MobiDBLite consensus disorder prediction 96 124 - -
Cpe08g00897 337 MobiDBLite consensus disorder prediction 11 30 - -
Cpe08g00897 337 Pfam Transcription factor BRX N-terminal domain 23 56 IPR027988 -
Cpe08g00897 337 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 336 IPR044532 -
Cpe08g00897 337 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 336 - -
Cpe08g00897 337 MobiDBLite consensus disorder prediction 209 223 - -
Cpe08g00897 337 Pfam Transcription factor regulating root and shoot growth via Pin3 306 336 IPR013591 -
Cpe08g00897 337 Pfam Transcription factor regulating root and shoot growth via Pin3 142 196 IPR013591 -
Cpe08g00897 337 ProSiteProfiles BRX domain profile. 307 337 IPR013591 -
Cpe08g00897 337 MobiDBLite consensus disorder prediction 203 303 - -
Cpe08g00897 337 ProSiteProfiles BRX domain profile. 142 197 IPR013591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g00897 Cpe-Chr8:7081373 Cpe17g00467 Cpe-Chr17:3481829 4.49E-12 dispersed
Cpe14g01000 Cpe-Chr14:8438601 Cpe08g00897 Cpe-Chr8:7081373 6.82E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00897 - - mcha:111014865 660.603