Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00913 ATGGGAAGGATGGGAGGTCGGCAAAGGACTTACAGCGCCAATTCCACCGATTATAAGCTTCTTGAAGAGATTGGTTATGGTGCTAGTGCCACGGTTTTTCGAGCGATCTATACTCCGTCCAATGAAGTTGTTGCCATTAAGTGTTTGGATCTTGATCGCTGTAATAGTAATCTAGATGATATACGTAGGGAGGCTCAAACAATGAGTTTGATAGATCATCCAAACCTCGTAAGGGCTTATTGTTCATTTGTTGTTGACCGAAACCTTTGGGTTGTCATGCCATTCATGGCAGAGGGTTCTTGTTTGCACCTAATTAAGACAGCATACTCAGATGGCTTTGAAGAGGTTGCTATTGGTTCTGTCCTGAAAGAAACTCTTAAAGCCTTGGAGTACCTTCATCGACAAGGACACATACATCGGGATGTGAAGGCTGGAAATATACTACTCGATGGTAATGGGGCTGTGAAGCTTGCTGATTTTGGTGTTTCAGCTTGCATGTTTGATACAGGTGATAGACAGCGCTCCAGAAATACCTTTGTGGGAACCCCATGCTGGATGGCGCCCGAGGTATTGCAACCAGGAACGGGATATAATTCCAAGGCCGATATTTGGTCTTTTGGTATTACAGCATTGGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTGCTTCTTATGACCATACAAAATGCTCCTCCTGGGCTGGATTATGATAGGGATAAAAAGTTCTCTAAGTCTTTTAAAGAAATGGTTGCAATGTGCCTGGTGAAAGATCAATCCAAGAGGCCAACAGCTGAGAAACTTTTAAAGCACTCCTTTTTCAAGAATGCTAAGCCTCCAGAGCTTTCTTTGAAGAAATTATTTGCTGACTTGCCTCCTCTTTCACTTCGTGTGAAGGACCTGCTGCTTAAAGATGCTGCCCAGCTAGCCTTAAAGAAAATGCCTTCAGCAGAGCAAGAAGCATTATCACAGAGTGAGTACCAGCGAGGAGTTAGCGCATGGAAATTTGATGTTGAGGATTTGAAAGCCCAAGCTTCCCTGGTGAATGATGATATGGAAGAGATGATGGACGAGGAGGAGAATATAAATACTTGTCATGTTAAGGATGCCTTTTGTTCTCAATCTAGTTTGAGGAATTTCAGTTCATGTAATGAATCATCTCAGGATGAACATGGAGTAGGGGCAAGTGGTCAGGGGTTGCCAAAAGCGGAGTGCTTGAACAAAAAGGGAAACTTTATGGAAGGTGATATGCTGAAAGCTGGGTTCCAAGAAACAACTGGATGGAAGAGAAATGGAACTAGCACTGAAGCAGAAGCTTCTACATCTGGCCAAGACAGTGTACAAGGAAAAACCAAAACCCAAATGCCAAAAGGTCGTCAAACTCAAAGTGGTCCACTTCTACCTGGTACTGTGCTTAGTCATTCTTTATCAGAAAGAGTGCGAGGATCTGATAGGAGTGATGTTTATGCACTCCTGTTTGAATCTGAAATTCAACCATCTACTGAAAAAAATCGTCGAGAAGCACGGCAAGCTCCAAGCTTCAGTGGTCCACTAATGCTGCCAAACCGTGCCTCAGCAAACAGCCTATCAGCTCCCATAAAACCTTCTGGAGGGTATAGAGATTCAATGGATGACAAATCAAAAGCTAATCTTGTGCAAATTAAGGGGCGTTTTTCAGTGACGTCAGAGAACCTAGATCTCGTAAAGGATATTCCATTGAGCACGGTTTCACGACGGTCTGCACAGAACTCACCTCTACGAAAGTCGGCTAGTGTTGGTGATTGGATATTTGATTCCAAGCAGGTTTGGATAATGTCCCTGCTTGCTTCGTCTCCATATGATTACTGTAATGCAAAATCTGTCAGCCAACCCCCCAAGGAGGCTTGCAACATCAACATGCCCACATCAATTCTTATGCCTCATCTTCAGAATCTTTTCCATCAGACCTCAATTCAACAGGATCTTATAGTGAACTTATTGAATAGCTTACAAACAGCAGACGTGGTTGATGCTACTCAAAATGGAAAGTTGCCTCCATTACCTCGAAGTTTGGAGAATAATGGAAGTGCCGAAACAGCAGCGGTTGAGAGAGAGCGTTTACTGATGCGTAAAGTCTCTGAACTTCAAGCTAGAATGACGCATTTGACTTATGAGTTGACTTCTGAAAAGTTGAAATACATACAATTACAAGAGCAGTTCAACTCAGCATCTGGTCAGGAAGAAAACGAGATCAAGAGGGAAGAGAACGTCTGA 2268 43.17 MGRMGGRQRTYSANSTDYKLLEEIGYGASATVFRAIYTPSNEVVAIKCLDLDRCNSNLDDIRREAQTMSLIDHPNLVRAYCSFVVDRNLWVVMPFMAEGSCLHLIKTAYSDGFEEVAIGSVLKETLKALEYLHRQGHIHRDVKAGNILLDGNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVLQPGTGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQSKRPTAEKLLKHSFFKNAKPPELSLKKLFADLPPLSLRVKDLLLKDAAQLALKKMPSAEQEALSQSEYQRGVSAWKFDVEDLKAQASLVNDDMEEMMDEEENINTCHVKDAFCSQSSLRNFSSCNESSQDEHGVGASGQGLPKAECLNKKGNFMEGDMLKAGFQETTGWKRNGTSTEAEASTSGQDSVQGKTKTQMPKGRQTQSGPLLPGTVLSHSLSERVRGSDRSDVYALLFESEIQPSTEKNRREARQAPSFSGPLMLPNRASANSLSAPIKPSGGYRDSMDDKSKANLVQIKGRFSVTSENLDLVKDIPLSTVSRRSAQNSPLRKSASVGDWIFDSKQVWIMSLLASSPYDYCNAKSVSQPPKEACNINMPTSILMPHLQNLFHQTSIQQDLIVNLLNSLQTADVVDATQNGKLPPLPRSLENNGSAETAAVERERLLMRKVSELQARMTHLTYELTSEKLKYIQLQEQFNSASGQEENEIKREENV 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7182865 7195360 - Cp4.1LG08g09110.1 Cpe08g00913 473879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00913 755 CDD STKc_OSR1_SPAK 17 279 - -
Cpe08g00913 755 Gene3D Transferase(Phosphotransferase) domain 1 99 307 - -
Cpe08g00913 755 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 3 747 - -
Cpe08g00913 755 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 3 747 - -
Cpe08g00913 755 Coils Coil 343 363 - -
Cpe08g00913 755 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
Cpe08g00913 755 MobiDBLite consensus disorder prediction 431 475 - -
Cpe08g00913 755 ProSiteProfiles Protein kinase domain profile. 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00913 755 SUPERFAMILY Protein kinase-like (PK-like) 17 333 IPR011009 -
Cpe08g00913 755 Pfam Protein kinase domain 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00913 755 MobiDBLite consensus disorder prediction 504 549 - -
Cpe08g00913 755 SMART serkin_6 18 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g00913 755 MobiDBLite consensus disorder prediction 430 475 - -
Cpe08g00913 755 ProSitePatterns Protein kinases ATP-binding region signature. 24 47 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe08g00913 Cpe14g01014 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g02349 Cpe-Chr1:19680058 Cpe08g00913 Cpe-Chr8:7182865 2.35E-07 dispersed
Cpe06g00678 Cpe-Chr6:4198781 Cpe08g00913 Cpe-Chr8:7182865 5.92E-70 dispersed
Cpe08g00913 Cpe-Chr8:7182865 Cpe13g00900 Cpe-Chr13:7689434 5.02E-147 dispersed
Cpe03g01498 Cpe-Chr3:11812109 Cpe08g00913 Cpe-Chr8:7182865 1.57E-106 transposed
Cpe14g01014 Cpe-Chr14:8545214 Cpe08g00913 Cpe-Chr8:7182865 1.34E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62559 PF00069 Pkinase 7.40E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00913 - - csv:101213683 1315.44