Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g00966 | ATGGCGACGTACCTTCATGCCAATTCTGAGTTTCAATCTGCTGCTGATGCTGGCCTTCAAACCCTTGTCTTAATGAATCCCGGCTATGTTCAATTCTCCGACACTCCACCGCCGCCTTCATCGCCGCCTCCCTCACACCCTAATCTTGTTTTCTTCAATTCTGCTTCGCCTGCTAATGCCTACTCTGCACAGACTCTGCCTCACCCGCCTTCTCATGCTCAACAGTTTGTCGGCATCCCACTACCGTCGACGACAACCGCTTCTCCGACGTCTCAAGACCATAATTTGTATTCCTTCAATACCCACCATGATATCTCCTCCTTACATGGCTTTGTTCCTCGTGTTCAGTATGATATTTGGAAACCAATTAACCCATCCACGACGGCGCGTGAGAGTTCACGCGCTCAACAGGGTTTGTCTTTGAGTCTGTCTTCACAGCAGGGTTTTGGGTCGAGAGAGATTCAATCGCAAACCCATCAGGCGGTTTCCGGCGAGGAGAACGTTCGGATCTCCGGTGGATCGTCTTCCTCTGCTTCCGGTATCACCAATGGCGCGGCTGGAATTCAGGGCGTTTTAATTAGTTCTAAGTATCTCAAGGCTGCTGTAGAACTTCTAGATGAGGTTGTTAATGTAACCCAAAACGGGATTAAGAACGAATCGTCTCCTAAAAAGGCCGCCGGAAATCAAAACAAGATGAATGGAGATGCATCCGCCGCCGCCACAACTGCCGATGGTTCTTTCGAAGGGGATGCCGACCGAAAACGCGCCGCCGATTTAACGACCGCCGAGAGACAAGAAATTCAGATGAAGAAAGAAAAGCTTATCAGTATGCTCGATGAGGTAGAGCAGAGGTACAGACACTACCACCACCAAATGAAGATAGTGATATCCACATTTGAAAAGGCGGCCGGAGCTGGGTCGGCAAGAACCTACACCGCGCTGGCACTTCAGACAATTTCGAAGCAATTCCGGTGCTTAAAAGACGCAATCACCGGCCAAATCAAAGCGGCGAACAAGAGTTTAGGAGAAGAAGAATACAACGGAAGAAAAATGGAAGGTTCCCGGTTGAAATTCGTCGATAACCATCTCCGGCAACAGCGAGCTCTGCAACAATTGGGTATGATCCAACACAATGCGTGGAGACCCCAACGAGGCTTACCAGAGCGATCCGTTTCGATTCTTCGCGCTTGGCTGTTCGAACACTTTCTCCATCCTTACCCTAAAGATTCAGACAAACACATGCTCGCTAAGCAAACAGGGCTCACCAGAGGCCAGGTTTCGAATTGGTTCATAAATGCGAGAGTTCGACTGTGGAAGCCCATGGTGGAAGAGATGTATTTGGAGGAAGTCAAGGAACAAGAACAGAACGGCGGTGGCGGATTGGCACCGTCGACGGCTGCGGAAAAAAGCAACGACGATTCAGATTCAAAAAGCCCAAATTCAAAACAAGAAAACTCTCCAAACCAAAACGTTCATCCTTCAGTCTCAATCTCAACGTCCTCCGATGGAAATGTTCGAAACCCATCTGGGTTTACCCTCATCGGAACCTCATCGGAGCTCGACGGAATCACTCAACGAAGCCCCAAGAAACAGAGAGGCACCGAAATCCTCTATTCCTCAAACAACAACAACAACAACAACAACGTCCAGTTCATAAACATGGACATCAAACTCCGAGAAGAAGAACAACAAAATCAAAATCAAAATCTCCATCATCTTCCAATGAAATTCGACGAGGAACGACAAAACAGAGATGGGTATTCATTTCTAGGCCAACCCCATTTCAACATGGCCGGATTCGGTCAATACCCAATCGGAGAAATCGGCCGATTCGACGCCGATCAGTTCACTCCAAGATTCTCCGGCAACAATGGCGTCTCATTGAGTCTAGGCCTTCCCCATGGCGAAAATCTCTCCGTAAACGCAGCCACCCACCAAGCCTTTCTCCCAAATCAAAGCATCCATTTAGGAAGAAGAACAGAAATGGGAAAACCCACTGATTTTTCCGCCATTAACGCCTCAACACCTCACTCCTCCACTGCTTTTGAAACCATCAACATCCAAAATGGCAAAAGGTTTGCAGCTCAGTTACTGCCGGACTTCGTGGCCTGA | 2112 | 48.48 | MATYLHANSEFQSAADAGLQTLVLMNPGYVQFSDTPPPPSSPPPSHPNLVFFNSASPANAYSAQTLPHPPSHAQQFVGIPLPSTTTASPTSQDHNLYSFNTHHDISSLHGFVPRVQYDIWKPINPSTTARESSRAQQGLSLSLSSQQGFGSREIQSQTHQAVSGEENVRISGGSSSSASGITNGAAGIQGVLISSKYLKAAVELLDEVVNVTQNGIKNESSPKKAAGNQNKMNGDASAAATTADGSFEGDADRKRAADLTTAERQEIQMKKEKLISMLDEVEQRYRHYHHQMKIVISTFEKAAGAGSARTYTALALQTISKQFRCLKDAITGQIKAANKSLGEEEYNGRKMEGSRLKFVDNHLRQQRALQQLGMIQHNAWRPQRGLPERSVSILRAWLFEHFLHPYPKDSDKHMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYLEEVKEQEQNGGGGLAPSTAAEKSNDDSDSKSPNSKQENSPNQNVHPSVSISTSSDGNVRNPSGFTLIGTSSELDGITQRSPKKQRGTEILYSSNNNNNNNNVQFINMDIKLREEEQQNQNQNLHHLPMKFDEERQNRDGYSFLGQPHFNMAGFGQYPIGEIGRFDADQFTPRFSGNNGVSLSLGLPHGENLSVNAATHQAFLPNQSIHLGRRTEMGKPTDFSAINASTPHSSTAFETINIQNGKRFAAQLLPDFVA | 703 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7581769 | 7585464 | - | Cp4.1LG08g09640.1 | Cpe08g00966 | 473932 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 126 | 180 | - | - | |
Cpe08g00966 | 703 | ProSiteProfiles | 'Homeobox' domain profile. | 377 | 440 | IPR001356 | GO:0003677 | |
Cpe08g00966 | 703 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 6 | 654 | - | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 450 | 543 | - | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 217 | 240 | - | - | |
Cpe08g00966 | 703 | SMART | prehox3 | 186 | 332 | IPR006563 | - | |
Cpe08g00966 | 703 | SUPERFAMILY | Homeodomain-like | 381 | 446 | IPR009057 | - | |
Cpe08g00966 | 703 | Pfam | Homeobox KN domain | 397 | 436 | IPR008422 | GO:0003677|GO:0006355 | |
Cpe08g00966 | 703 | Coils | Coil | 264 | 284 | - | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 247 | 263 | - | - | |
Cpe08g00966 | 703 | Pfam | Associated with HOX | 191 | 331 | IPR006563 | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 480 | 543 | - | - | |
Cpe08g00966 | 703 | PANTHER | BEL1-LIKE HOMEODOMAIN PROTEIN 5 | 6 | 654 | - | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 61 | 92 | - | - | |
Cpe08g00966 | 703 | MobiDBLite | consensus disorder prediction | 217 | 263 | - | - | |
Cpe08g00966 | 703 | CDD | homeodomain | 380 | 441 | IPR001356 | GO:0003677 | |
Cpe08g00966 | 703 | Gene3D | - | 383 | 445 | - | - | |
Cpe08g00966 | 703 | SMART | HOX_1 | 380 | 444 | IPR001356 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00311 | Cpe08g00966 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe05g00449 | Cpe-Chr5:2586530 | Cpe08g00966 | Cpe-Chr8:7581769 | 1.35E-179 | dispersed | |
Cpe08g00966 | Cpe-Chr8:7581769 | Cpe16g00265 | Cpe-Chr16:4649470 | 8.91E-97 | dispersed | |
Cpe11g00080 | Cpe-Chr11:425117 | Cpe08g00966 | Cpe-Chr8:7581769 | 3.09E-46 | dispersed | |
Cpe16g00823 | Cpe-Chr16:7935654 | Cpe08g00966 | Cpe-Chr8:7581769 | 8.97E-145 | wgd | |
Cpe03g00311 | Cpe-Chr3:1597464 | Cpe08g00966 | Cpe-Chr8:7581769 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49898 | PF07526 | POX | 1.00E-46 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g00966 | - | - | csv:101208201 | 1046.96 |