Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g00998 ATGTGGGCAAGCGCCGAAGGAGGGCCGCCGGAGGTTACTCTGGAGACTTCCATGGGTTCTTTCACTGTCGAGCTTTACTTCAAACATGCGCCGAGAACATGTAGAAATTTTATTGAACTTTCTCGGCGAGGTTATTACGACAATGTCAAATTTCACCGGATTATTAAGGATTTTATAGTTCAAACTGGAGATCCCACAGGAACTGGACGGGGTGGGGAATCTATTTATGGTAAGAAGTTTGAGGATGAAATAAAACCAGAGTTGAAGCATACCGGAGCTGGTATTCTATCAATGGCAAATGCTGGTCCTGATACAAATGGAAGCCAATTCTTTATCACTCTTGCTCCTTGCCCATCTCTAGATGGGAAGCACTCCATCTTTGGAAGAGTTTGTAGGGGAATGGAAATAATCAAAAGGCTTGGCAGCGTACAAACTGATAACAATGATAGACCCATCCATGATGTGAAAATACTACGAGCATCAGTTAAAGACTAA 495 43.03 MWASAEGGPPEVTLETSMGSFTVELYFKHAPRTCRNFIELSRRGYYDNVKFHRIIKDFIVQTGDPTGTGRGGESIYGKKFEDEIKPELKHTGAGILSMANAGPDTNGSQFFITLAPCPSLDGKHSIFGRVCRGMEIIKRLGSVQTDNNDRPIHDVKILRASVKD 164
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7735065 7740194 + Cp4.1LG08g09910.1 Cpe08g00998 473964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g00998 164 PIRSF Peptidylpro_ismrse 3 164 IPR024936 GO:0003755
Cpe08g00998 164 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 161 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 25 40 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 51 63 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 109 121 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 SUPERFAMILY Cyclophilin-like 11 162 IPR029000 -
Cpe08g00998 164 Gene3D - 3 164 IPR029000 -
Cpe08g00998 164 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 46 63 IPR020892 GO:0003755|GO:0006457
Cpe08g00998 164 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 15 162 IPR002130 GO:0000413|GO:0003755
Cpe08g00998 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 1 5 163 - -
Cpe08g00998 164 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 5 163 IPR044666 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00282 Cpe08g00998 CCT
Cpe03g00282 Cpe08g00998 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01345 Cpe-Chr2:11902854 Cpe08g00998 Cpe-Chr8:7735065 3.09E-12 dispersed
Cpe04g00858 Cpe-Chr4:7892184 Cpe08g00998 Cpe-Chr8:7735065 9.16E-27 dispersed
Cpe08g00998 Cpe-Chr8:7735065 Cpe16g00113 Cpe-Chr16:2241725 2.15E-53 dispersed
Cpe03g00282 Cpe-Chr3:1446526 Cpe08g00998 Cpe-Chr8:7735065 1.83E-117 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g00998 K12733 - csv:101222111 338.191