Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe08g01033 | ATGGACTTTCATCTGAAGCAATGTAGAGAGCAGGAGGAGTCAGAGGAACAACATTCTGCAAAGATATCCAAGTTCTTTCTTCAACACCCACAATCCTCTGTTTCCTCTGTTTCCTCTGTTTCCTCTGTTTCCTCTGTTCTTCCTCTCTTCGTATCTGATTCCAACAACAACTCCAAAGCTTCATCAATCCTCTCGCCATTTCCCGATTCAACTCCTTCTGCTAATACACTCCCAAGGATGTGGGGTTATTTCAGTGCTGCTCAGAGGCAGGAGCTTGAGCTTCAAGCTCTCATTTTCCGGTATATGTTGGCCGGAGCTGCCGTACCGCCGGAGCTTCTTCTCACCATTAAGAAAAGCCTTCTTTCTTCCAGTACTCCATTTTTTCTTCATCACCCTCTTCAGCATTTCCCTCATTATCCCACTTCTTTGTTGCAAGCAGGTTACTGGGGCAGAGCCGCCATGGATCCTGAGCCCGGCCGGTGTCGGAGAACCGACGGCAAAAAATGGCGTTGTTCAAGAGATGTGGTCGCCGGGCAGAAATACTGCGAGCGCCACATGCACCGTGGCCGTAACCGTTCAAGAAAGCCTGTGGAAACTGCCACAATTAACCCCAGCACCACCACATCGACCGCCGGAGCTAATGGTGGCGGTGGTGGTTGTTCTCTCAGTTCCAACACCAACCGTGTTGTTGGTGGCGGTGGTCGGCCTTTTCTGGCTGTGGAAAGTGGGAATTATTTCTCTTTGTCTGGACAAACCCCATCCGTTGATCTTCTCCATCTTAATCAACGTTCTTGCTCGGATTCCTTATCGGAGCACAAGAATTTCTATGAATCCCATAAGGAAGCCGTTGCCGGAGACGCCAAGTCCGACAGCCATATATTAAGGCATTTCTTCGACGATTGGCCAAGGTCCAACAACAATGGGAGCGACAACGTCACCCGAAAAATGAACTCTACATCCGCTTCCACCACTTCCCTTTCGATCTCCATACCCGAGAACCCATCATCCTCTTCGGACGTGTCGTTGAAATTGTCGACAGGAGGAAGCTCTGATCAAGGGGTTGGCCATCATATTCATCAGGATGGCAATTCTGAGCGGGAGCACACGCATTTGAATTGGGCAGCTGGGTGGGCAGCCACGCAGATGGCGTCGATGGGTGGACCGCTGGCAGAGGTGCTGCGATCGACTAATAACAACTCGTCGCCAACGAGTATACTACATCAGTTGCAAAGAGCAACGAACTCGGAAGCTAGCTATATTAGCACTTGA | 1269 | 50.2 | MDFHLKQCREQEESEEQHSAKISKFFLQHPQSSVSSVSSVSSVSSVLPLFVSDSNNNSKASSILSPFPDSTPSANTLPRMWGYFSAAQRQELELQALIFRYMLAGAAVPPELLLTIKKSLLSSSTPFFLHHPLQHFPHYPTSLLQAGYWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVETATINPSTTTSTAGANGGGGGCSLSSNTNRVVGGGGRPFLAVESGNYFSLSGQTPSVDLLHLNQRSCSDSLSEHKNFYESHKEAVAGDAKSDSHILRHFFDDWPRSNNNGSDNVTRKMNSTSASTTSLSISIPENPSSSSDVSLKLSTGGSSDQGVGHHIHQDGNSEREHTHLNWAAGWAATQMASMGGPLAEVLRSTNNNSSPTSILHQLQRATNSEASYIST | 422 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 7928427 | 7930864 | - | Cp4.1LG08g10400.1 | Cpe08g01033 | 473999 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe08g01033 | 422 | MobiDBLite | consensus disorder prediction | 196 | 219 | - | - | |
Cpe08g01033 | 422 | PANTHER | - | 7 | 422 | IPR031137 | GO:0005634|GO:0006351|GO:0032502 | |
Cpe08g01033 | 422 | PANTHER | GROWTH-REGULATING FACTOR 3 | 7 | 422 | - | - | |
Cpe08g01033 | 422 | MobiDBLite | consensus disorder prediction | 302 | 357 | - | - | |
Cpe08g01033 | 422 | MobiDBLite | consensus disorder prediction | 188 | 219 | - | - | |
Cpe08g01033 | 422 | ProSiteProfiles | QLQ domain profile. | 83 | 118 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe08g01033 | 422 | Pfam | QLQ | 84 | 116 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe08g01033 | 422 | ProSiteProfiles | WRC domain profile. | 155 | 199 | IPR014977 | - | |
Cpe08g01033 | 422 | SMART | QLQ_2 | 82 | 118 | IPR014978 | GO:0005524|GO:0005634|GO:0006355 | |
Cpe08g01033 | 422 | MobiDBLite | consensus disorder prediction | 302 | 366 | - | - | |
Cpe08g01033 | 422 | Pfam | WRC | 156 | 198 | IPR014977 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe03g00250 | Cpe08g01033 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe08g01033 | Cpe-Chr8:7928427 | Cpe16g00168 | Cpe-Chr16:3771041 | 5.73E-43 | dispersed | |
Cpe03g00250 | Cpe-Chr3:1245735 | Cpe08g01033 | Cpe-Chr8:7928427 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49903 | PF08879 | WRC | 2.70E-22 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe08g01033 | - | - | cpep:111791263 | 574.704 |