Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01043 ATGGAAATGGAGAGCTCGCGGAGACCTTTCGATCGAACGAGGGAACCGGGTTTGAAGAAGCAGCGACTGGCCGATGAGGCTGAGCGCGGTGGGAACATTAATGGCCGGCCGTTTCCGCAGAGACCAATTGGTTCGGGGACCAATATTGTGCAACCCAGATTTCGAGCAAGTGATAGAGATTCGGGAAGCAGTGATTCTGGTCGAGGGGGGTATCAGCCTCAACCACTGCAGCATCAGGAGCTTGTCAGCCAATACAGAACAGCCCTTGCTGAGCTGACTTTCAATTCGAAACCAATCATCACGAATTTGACCATAATCGCGGGTGAAAATCTCCAGGCTGCAAAAGCCATCTCTGCCACCGTTTGCGCCAACATTCTTGAGGTTTCCAGTGAGCAGAAGCTACCATCACTTTATCTATTGGACAGTATTGTGAAGAATATTGGAAGAGACTACATAAAATACTTTGCAGCAAAGCTGCCCGAGGTATTCTGCAAAGCTTATAGGCAAGTTGACTCTCCTGTACATACAAGTATGAGACATCTTTTTGGCACCTGGAAAGGAGTGTTTCCTCCTCAAACACTGCAGGTTATCGAGAAAGAACTTGGCTTCATAACCAACAGTGGTTCTTCTTCTGGGACCATATCCTCAAAGCCAGAATTGCAGTCACAACGTCCACCCCATAGTATCCATGTAAATCCCAAGTATATAGAGAGACAACGGCTTCAACAGTCGGGCAGGGTGAAAGGAATGACTAGTGATGCTACTATTGCAACTACAAATGTAACTCAGGATGTTGCCCAAGCCAAAATTAGCACTGGACGTCCATGGGCAGATGCTTCAATTAAAGTGCATGACATTCAGCGTCCACTTAGAGATGCACCAAATGATATGGCACAAGAGAAGAACATCACGGCTGCATATGCAGATTACGAATATGGTTCCGATCTTTCGAGGACTCCAGGTATCGGAAGAAGGGCTGTTGATGAAGGGCGAGACAAACCTTGGTCTACAACTGGTAGCAATTTGGCAGAGAAGTTATCTGGCCAAAGAAATGGGTTCAACATCAAGCTTGGATATGAAAATTATCCTGCACCCAGGTCTGCAAACACTGGTGCACGTCTACTGCCCACGCAAAATTTTTCAAGCAGCAGCAGCAACCGAGGATTGTCTACTAACTGGAAGAACTCTGAGGAAGAGGAGTTCATGTGGGGTGAAATGAACTCTATGTTGACAGGTCATAGTGCATCTGCCATTGCCAGTAGCATTGGGAAAGATCAATGGACTCCTGAGGATTCAGATAATTCGGGTATTGAAAATAAGCTATTAAGTTTACGAGATACTGGGGGAAGTGTTGATAGAGAAGCTTCCAGTGATTCACAATCATCTGAGCAGAGAGAACTGGGGGATTCTGGACAGCAAAGGTCATCAATGTGGCAAGTGCAGGAGCCATTGTCTCTGGATGGGCTGAGAGGCGGGATTCCTAAAAAGAATTCAGCTCAGTCGGGAGGATATGGTACCACTCTTACTGCCCTGTCAGGTGGTAACTCTTCTGTGGATCAAATGGGAGGTCGACCACAAATTACATCGTCGAATATTGGAGCTTCAGGACATGAATTTCTGAACAAGGGAGGTTCAGGGTCCATTGGGACTGTAGGCCAGCAAATATTTCCATCACGAAATGTTGCATTCGCATCTGGACAGCCACCCTTGCATCAACGTCCCCCTTCACCATTGTCAGTGGATCATATTCCTCATCAAATGCCCAACCATAAAACTTCTTCATTTTCTAACCTTGACCCACGTAAAAGGCATTTACAGGATGCTTCCCTTGGTCGGCATCCCAACGTTCAGTCAGATAACCTTAAAAAACCACAGCCTCAGGACCGTCAAGCTGCAGCCTCCTCCATACCTACTTCTCAACCCAGGCAGCCGTTCTCTTTATCTGAGTCACTAAAACCTGATGTTAGGCAGTCCGAACTTTCAAGACAGCATGCAGTATCTATTCCAGGCACTGATTTTGGACCTCCTTCATCAGCTGGGACAGTTCCAGTTCGTTTACCTGCAGAAATTTTGGGAGAGACAAGCACTAGTAGTTTGTTGGCTGCCGTAATGAAGAGTGGAATTTTTTCCAACCATTCAATAGCCAGTAGCATGCAGCAGAATATCAGCTTCCAAGATGCAGGAAATATGCAACCCCATTCAAACGTCAAACCTCCACTACCAAGCCGGTCTTCTCCTGCTCATACTCAGACGACATTCTCAGAGCCAAAGACTGCGGGAGAATCTTCATTAGGTCCTCTTGAAAGCCCGTCAGCTCTGGTTAAGCTATCTCAAACTAAGGTAGAAGATACTCCGTTGCCATCTGATCCACCTTCACCCTCATCTCCTATGACTAGTGCATCCACGGAAACTTCAAATGTGGTAAACGACTCTTCTACCCCAATTTCTAACCTTTTGAGCTCATTGGTTGCAAAGGGCCTTATATCTGCTTCAAAAGGAGAATTAACAAATAGTGCAACTTCCCAAATGCCTGCACAGCCTGAAAATTTGAAGTTAGGTGATGCTGTGACATGTTCTGTACCAGTTCCTTCCATCCCCGCTACTTCTTCCAGTCAATCATCTACGATACTTGAATCATCCTCAAAAGCTGCTGCTAAGAGCTCCACTAGTCCACCTCCATTTGCCACAACTGAGATAACCAACCTCATAGGCTTTGAATTTAGTTCACATGTTATTCGAAAATTTCAGCCATCTGTGATCAGTGGACTCTTCGACGATATTCCATATCAATGTAAGATCTGTGGTCTGAGACTGAAACTTGAAGAACAGTTGGATACACACTTGCAGTGGCACACATTAAGAACTGAGGCAAACAATTCAAATAGGACACCAAGAAGATGGTATCCAAGTTCAGATGATTGGATTTCTGGAAATGATATACTCTTACATGATGCTGCCACTTCTCCGGACAGGTGTGACATGATGGAAGAAGTTAATGAGCCAATGGTACCTGCAGATGAAGATCATTTGGTCTGTGTTTTATGTGGTGAACTTTTTGAAGATTTTTATAGTCATGACTTGGACAAGTGGATGTTCAAAGGAGCAATGTATATCACCATCCCATCAGCGGTTAGTGAGATAGGAAGCACAAATGAACAAGTTGCTAGAGGACCCATCGTTCACACAAAATGTATAACTGAAAGTTCACTACATGACTTGGGACTGGCAACTGATATTAAGATGGTAATGTTCTTGATTCTTTATACTTCTGCAGGACTTGATTTGGGTTTACAATCGTCCAATGGTCTCCCTGATGACTTTATGTGTTGTTCCTAG 3336 45.02 MEMESSRRPFDRTREPGLKKQRLADEAERGGNINGRPFPQRPIGSGTNIVQPRFRASDRDSGSSDSGRGGYQPQPLQHQELVSQYRTALAELTFNSKPIITNLTIIAGENLQAAKAISATVCANILEVSSEQKLPSLYLLDSIVKNIGRDYIKYFAAKLPEVFCKAYRQVDSPVHTSMRHLFGTWKGVFPPQTLQVIEKELGFITNSGSSSGTISSKPELQSQRPPHSIHVNPKYIERQRLQQSGRVKGMTSDATIATTNVTQDVAQAKISTGRPWADASIKVHDIQRPLRDAPNDMAQEKNITAAYADYEYGSDLSRTPGIGRRAVDEGRDKPWSTTGSNLAEKLSGQRNGFNIKLGYENYPAPRSANTGARLLPTQNFSSSSSNRGLSTNWKNSEEEEFMWGEMNSMLTGHSASAIASSIGKDQWTPEDSDNSGIENKLLSLRDTGGSVDREASSDSQSSEQRELGDSGQQRSSMWQVQEPLSLDGLRGGIPKKNSAQSGGYGTTLTALSGGNSSVDQMGGRPQITSSNIGASGHEFLNKGGSGSIGTVGQQIFPSRNVAFASGQPPLHQRPPSPLSVDHIPHQMPNHKTSSFSNLDPRKRHLQDASLGRHPNVQSDNLKKPQPQDRQAAASSIPTSQPRQPFSLSESLKPDVRQSELSRQHAVSIPGTDFGPPSSAGTVPVRLPAEILGETSTSSLLAAVMKSGIFSNHSIASSMQQNISFQDAGNMQPHSNVKPPLPSRSSPAHTQTTFSEPKTAGESSLGPLESPSALVKLSQTKVEDTPLPSDPPSPSSPMTSASTETSNVVNDSSTPISNLLSSLVAKGLISASKGELTNSATSQMPAQPENLKLGDAVTCSVPVPSIPATSSSQSSTILESSSKAAAKSSTSPPPFATTEITNLIGFEFSSHVIRKFQPSVISGLFDDIPYQCKICGLRLKLEEQLDTHLQWHTLRTEANNSNRTPRRWYPSSDDWISGNDILLHDAATSPDRCDMMEEVNEPMVPADEDHLVCVLCGELFEDFYSHDLDKWMFKGAMYITIPSAVSEIGSTNEQVARGPIVHTKCITESSLHDLGLATDIKMVMFLILYTSAGLDLGLQSSNGLPDDFMCCS 1111
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7981994 7988621 - Cp4.1LG08g10430.1 Cpe08g01043 474009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01043 1111 PANTHER RNA POLYMERASE II-BINDING DOMAIN PROTEIN 3 1073 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 321 342 - -
Cpe08g01043 1111 SUPERFAMILY ENTH/VHS domain 78 207 IPR008942 -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 371 393 - -
Cpe08g01043 1111 CDD CID_Pcf11 82 194 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 453 482 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 499 522 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 563 681 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 611 665 - -
Cpe08g01043 1111 ProSiteProfiles CID domain profile. 77 205 IPR006569 -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 726 759 - -
Cpe08g01043 1111 ProSiteProfiles Zinc finger C2H2 type domain profile. 929 956 IPR013087 -
Cpe08g01043 1111 SMART 558neu5 80 202 IPR006569 -
Cpe08g01043 1111 Pfam CID domain 87 195 IPR006569 -
Cpe08g01043 1111 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 3 1073 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 208 228 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 1 75 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 726 812 - -
Cpe08g01043 1111 Gene3D - 72 202 IPR008942 -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 368 393 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 208 229 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 795 812 - -
Cpe08g01043 1111 ProSitePatterns Zinc finger C2H2 type domain signature. 931 951 IPR013087 -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 444 522 - -
Cpe08g01043 1111 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00240 Cpe08g01043 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01043 Cpe-Chr8:7981994 Cpe20g00378 Cpe-Chr20:2128870 7.22E-32 dispersed
Cpe03g00240 Cpe-Chr3:1194792 Cpe08g01043 Cpe-Chr8:7981994 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01043 K14400 - csv:101223169 1676.76