Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01053 ATGGTGATGATGATGGTGAAGGAGAAGATGGAGGTGAAGATTTTCAGTTCCGCCATAGCTTTTCTTCTCTGCATTACCCTTTTGATTTCACCTTCTCTCTGTTTAGATGATACTTCTGCTCTGATTCGCTTTCGTCTTCAAGCTGATTCCCATGGCGGCCTGCTCGGAAACTGGACTGGTTCTGATGCTTGTGGTTCTTCATGGCGGGGAGTTCAGTGCTCTGTTAATGGCCGTGTTATCGCTCTTTCTCTTCCTTCTATGAACTTGCGTGGCCCCATTGAGTCTTTAGCGCCGCTCGATCAGCTCCGGGCACTCGACCTCCATGACAACCGTTTGAACGGAACCATTTCGCCGATTGTGAACTGTACGAATCTCAAGCTGTTGTATCTCTCTGGTAATGACTTCTCCGGCGAGATTCCGCCGGGATTCTCGTCTCTTAGACGACTTCTCCGACTGGATTTGTCTGATAACAACATTCGCGGCGGAATTCCTGAGGATCTCTCGAAATTGTCTCGACTTCTTACTCTCCGTTTGCAGAATAATGTCCTCTCCGGTACGGTTCCCGATCTCTCTGTTTCGCTTGTGAATCTTACTGAAGTTAATTTATCCAACAATGAACTGTACGGACGGTTACCTGACGGGTTGGTGAAGAAATTCGGCGAGGAGAGTTTCGCTGGTAACGAAGGGGTCTGTGGATCGAGTCCTTTACCGATCTGTTCGGTTACTAGTTCACCGCCGGCGTCGGATTCCGGCAGAACGGTACCATCAAATCCAATCTCAATACCGAAAAACCCTAATATCAGTCCGAACATTAAGGAATCGCGAAAAGGACTCAGCCCTGGCGCGATTGTTGCGATTGTGATCGCAAATTGCGTTGCGTTGCTCGTGATTATCTCCTTCGTCGTCGCGTATTACTGCGCTCGTGACCGGAGCTCGAGTTCCATGGCGGGAAGCGACAGTGGGAAGAGAAGAAAGAGCGGAAGTAGCTACGGAAGCGAGAAAAGAGTCTACGCCAATGGCGGTGGCGACAGTGACAGTACTAACGCTACAGATAGAAGCAAACTGGTGTTCTTCGATTGGAAGAAGCAATTCGAGCTTGAAGATTTGCTGAGAGCCTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTATACAGGGCGGTACTCGACGACGGTTGTACAGTGGCGGTGAAGAGATTGAAGGATGCAAATCCATGTCCGAGGAAGGATTTTGAACAGTACATGGATGTGATTGGGAAACTGAAACATCAAAATATCGTTAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTACGATTATCTTCCTAATGGAAGCTTGCATTCTCTTCTCCATGGTAATCGAGGTCCAGGAAGGATTCCATTGGATTGGACGACGAGAATCAGTTTGCTTTTGGTTGATCTCCCGAATTGGGTTCGATCCGTGGTGAAAGAAGAGTGGACGGCCGAGGTGTTTGATCCCGAGCTATTACGGTACAAGAACATTGAGGAGGAGCTTGTGTCAATGCTTCATGTTGGGTTGGCTTGCGTTCTTCCTCAGCCTGAGAAGAGACCGACGATGGTAGAAGTGGCTAAGATGATCGAAGATATCAGGGTCGAGCAATCCCCGCTCGGAGAAGATTACGACGAATCACGTAATTCGCTTTCGCCTTCCCTTGGAACCACAGAAGATGGTATGGTGTAG 1719 48.57 MVMMMVKEKMEVKIFSSAIAFLLCITLLISPSLCLDDTSALIRFRLQADSHGGLLGNWTGSDACGSSWRGVQCSVNGRVIALSLPSMNLRGPIESLAPLDQLRALDLHDNRLNGTISPIVNCTNLKLLYLSGNDFSGEIPPGFSSLRRLLRLDLSDNNIRGGIPEDLSKLSRLLTLRLQNNVLSGTVPDLSVSLVNLTEVNLSNNELYGRLPDGLVKKFGEESFAGNEGVCGSSPLPICSVTSSPPASDSGRTVPSNPISIPKNPNISPNIKESRKGLSPGAIVAIVIANCVALLVIISFVVAYYCARDRSSSSMAGSDSGKRRKSGSSYGSEKRVYANGGGDSDSTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHQNIVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLLLVDLPNWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMVEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLGTTEDGMV 572
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8040718 8043246 + Cp4.1LG08g10520.1 Cpe08g01053 474019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01053 572 Pfam Protein kinase domain 375 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01053 572 MobiDBLite consensus disorder prediction 311 325 - -
Cpe08g01053 572 SUPERFAMILY Protein kinase-like (PK-like) 375 475 IPR011009 -
Cpe08g01053 572 MobiDBLite consensus disorder prediction 311 345 - -
Cpe08g01053 572 Gene3D Ribonuclease Inhibitor 34 116 IPR032675 -
Cpe08g01053 572 MobiDBLite consensus disorder prediction 242 272 - -
Cpe08g01053 572 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 478 563 - -
Cpe08g01053 572 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 477 - -
Cpe08g01053 572 SUPERFAMILY L domain-like 35 216 - -
Cpe08g01053 572 Gene3D Transferase(Phosphotransferase) domain 1 478 560 - -
Cpe08g01053 572 Pfam Leucine Rich Repeat 124 146 IPR001611 GO:0005515
Cpe08g01053 572 PANTHER LRR RECEPTOR-LIKE KINASE 478 563 - -
Cpe08g01053 572 PANTHER LRR RECEPTOR-LIKE KINASE 17 477 - -
Cpe08g01053 572 ProSiteProfiles Protein kinase domain profile. 371 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe08g01053 572 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
Cpe08g01053 572 Gene3D Transferase(Phosphotransferase) domain 1 355 477 - -
Cpe08g01053 572 MobiDBLite consensus disorder prediction 549 572 - -
Cpe08g01053 572 Gene3D Ribonuclease Inhibitor 117 240 IPR032675 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00227 Cpe08g01053 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01053 Cpe-Chr8:8040718 Cpe09g00316 Cpe-Chr9:1877589 3.72E-137 dispersed
Cpe03g00227 Cpe-Chr3:1131574 Cpe08g01053 Cpe-Chr8:8040718 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62563 PF00069 Pkinase 1.50E-12 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01053 - - bhj:120091526 773.852