Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01055 ATGGAAAGCGATAGTTTAGGAGGCGACGGTGGAGGCGGTGGCGGCGGCGGAGGAGGGATGTTTTCCGGGATGAATTCGGCAATGTTGGGATTGGATTTACCTCTTCATCCACACCCTACGAATCCCCCGAATTCTCACCAATTACATCACCCTTCAATGGTGTCTTACGTCCCACAAAAGCCGCAGCTCCAACAACAACCGCCGCCTACCGCCGTGAGATACCCTTACCCTGCGAAGCCCAAGCCGCAGCAGTCGAATCTCAGCGATGATGAGGAGCAGGGATTCGCGGTGGAGGACGGCAACAGCGATGGAAAGAAGAAGATCTCCCCATGGCAGAGGATGAAATGGACGGACATGATGGTCCGGCTGTTAATCACGGCGGTGTTTTACATCGGCGATGAAGGTGGGACGGAGCAGGCGGACCACGCCGGCAAGAAAAAACCAGTGGGACTGCTGCAGAAGAAGGGGAAATGGAAATCGGTTTCCAGAGCGATGATGGAGAAGGGATTTTATGTTTCGCCACAGCAATGCGAAGACAAATTCAACGATTTAAACAAGAGATATAAACGAGTTAACGACATTTTGGGGAAGGGAACCGCTTGCAGAGTCGTCGAGAATCAAACGCTATTGGATTCGATGGAATTAACACCAAAAACGAAGGAAGAAGTTCGAAAATTACTCAATTCTAAACATCTATTCTTCAGAGAAATGTGCGCTTACCACAACACTTGCCGTCACAGCACTGGCAACAACGGCGGAGGAGGCGCCCATCCTTCTCCGGACACTGCAGCAGAACCACCCTCCCACCTTCAACAACACCACCAACAACAACAACGATGCTTCCACGCGACGGAGACCGCCGCTACCGCGGCGACAGTAGGAGCGGACGGAGATGACGAAGATGAGGACGATGAAGAAGACGAATCAGAGGAAGATGAGGATGACGAGGAGGAGGAGGAAATTGAAGGAACTTCGAGAGGTCACGAAGAGGAGGATGAGACGGAATCGAGGAAGCGGGCGAGGAAAGGGGGGATTGCAGTGGCGGCGATGCAGCAATTGAATGCAGAGGTGATCGGAGTGCTGCAGGACGGGGGGAGGAGTCCGTGGGAGAAGAAGCAGTGGATGAAGAGCCGGTTGATTCAGCTTGAAGAGCAACAGGTGAACTACCAATCGCAGGCGTTCGAGCTGGAGAAGCAGCGGCTGAAATGGCTGAAGTTCAGGAGCAAGAAGGAGAGGGATATGGAGAGGGCGAAGCTGGAGAACGAGAAGAGAAGGCTGGAGACGGAGAGGATGGTGCTGATGGTGAAGCAGAAGGAGTTGGATTGGATGGATATGCACCATTATCAGCAGCAGCATTCCTCCAACAAGCGAGGCGATCCATCGTCGATTACAGGTTGA 1398 53.0 MESDSLGGDGGGGGGGGGGMFSGMNSAMLGLDLPLHPHPTNPPNSHQLHHPSMVSYVPQKPQLQQQPPPTAVRYPYPAKPKPQQSNLSDDEEQGFAVEDGNSDGKKKISPWQRMKWTDMMVRLLITAVFYIGDEGGTEQADHAGKKKPVGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQTLLDSMELTPKTKEEVRKLLNSKHLFFREMCAYHNTCRHSTGNNGGGGAHPSPDTAAEPPSHLQQHHQQQQRCFHATETAATAATVGADGDDEDEDDEEDESEEDEDDEEEEEIEGTSRGHEEEDETESRKRARKGGIAVAAMQQLNAEVIGVLQDGGRSPWEKKQWMKSRLIQLEEQQVNYQSQAFELEKQRLKWLKFRSKKERDMERAKLENEKRRLETERMVLMVKQKELDWMDMHHYQQQHSSNKRGDPSSITG 465
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8051528 8052925 - Cp4.1LG08g10570.1 Cpe08g01055 474021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01055 465 Coils Coil 379 399 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 445 465 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 327 342 - -
Cpe08g01055 465 Pfam Myb/SANT-like DNA-binding domain 113 239 IPR044822 -
Cpe08g01055 465 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 19 462 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 265 285 - -
Cpe08g01055 465 PANTHER F16F4.11 PROTEIN-RELATED 19 462 - -
Cpe08g01055 465 Coils Coil 407 436 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 295 326 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 249 342 - -
Cpe08g01055 465 Gene3D - 116 190 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 1 108 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 42 61 - -
Cpe08g01055 465 MobiDBLite consensus disorder prediction 62 76 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe03g00225 Cpe08g01055 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe08g01055 Cpe-Chr8:8051528 Cpe13g00682 Cpe-Chr13:6381999 4.19E-80 dispersed
Cpe03g00225 Cpe-Chr3:1123388 Cpe08g01055 Cpe-Chr8:8051528 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49909 PF13837 Myb_DNA-bind_4 2.80E-21 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01055 - - cmax:111498678 790.801