Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe08g01062 ATGGGTACTCATGGCCGAAGCAGTGAGAGAAAGAAAGAGAAGACGTCATCTTCGAGGAGACGTAGCAGAAGAAGGTCTGACGACTCTGAATCTGATTCCGACGACTCAGATAGCCGGGATTCATCTCCAGTGGCGAGCTCCCGGAAGCGCAGGGAAAGACTCGGTGGTAGCAGGAGTAGTCACCGGAGTAGACGAAGGAGCTCCTCTCGTGGGCGGGATTCTGGAGACGATAGTTCGAATGATAGTTATTGCAGCGATGATGGTGGTCGCAAGAAGAGTAAGTCTTCCAGGAAAGTTACTGAAGAGGAAATTAGCGAATACTTGGCCAAGAAAGCGCAGAAAAAGGCCTTGCGAGTTGCCAAGAAATTGAAGTCCCAGACGGTTTCTGGTTATTCCAACGATTCGAATCCATTCGGCGATTCCAATCTCAATGAAAAATTTGTATGGCGAAAGAAAATTGAGCGTGATGTTACTCAAGGTGTGTCGCTTGATGCCTTTTCAATGAAGTCCGAGAAAAAAAGACAGAGAGAAAGGATGGCAGAGATTGAAAAGGTGAAGAAAAGGAGGGAGGAAAGGGCTCTTGAAAAAGCACAACATGAGGAAGAAATGGCATTGCTAGCTAGAGAACGTGCTCGTGCTGAATTTCAGGATTGGGAGAAAAAGGAAGAAGAGTTCCATTTTGATCAAAGCAAAATCAGATCAGAGATAAGAGTTCGTGATGGGCGTTCGAAGCCTATTGATATTCTATCCAAGCAACTGAATGGATCGGATGATTTTGATATAGTAATCAATGAGCCATACACTGTATTCAAGGGCTTGACTGTGAAAGAAATGGAAGAGCTTCGTGATGACATCAAAATGCATCTTGATCTGGACAGGGCGACGCCTACACATATCGAGTATTGGGAGGCACTTCTCGTAGTTTGTGATTGGGAACTAGCTGAAGCTCGAAAAAAGGATGCTCTGGATAGAGCCAGAGTTCGTGGTGAGGAGCCTCCTGCTGAGTTGCTTGCAGAAGAAAGGGGTCTGCATTCCAGCATTGAAACAGATGTCAAAAATCTTCTGGAAGGAAAGACTTATGGTGAATTGGAGGCATTACAATCTCAGATTGAGTCACAGATGCGATCTGGAACTGCAAAGGTGGTTGAGTACTGGGAGGCTGTAATAAAGCGCCTTCATATATACAAGGCCAAGGCTTGCTTGAAGGAGATTCATACGAAAAAACTGCATGAGCATCTTGTACGCCTTGAGCAGCCTTTTGAGGATGATGAAGAAAAGGTGGACCAGGAAATCGAGATGGAAACTGAACGCTCTTTACAAGTGAAAGCTGAAGAGCAAGAGCTTGATATTAGAGCAGCGGAAACATATTCGCCTGATCTCCTTGAGGAAGAAGAGAATGAAGAAGCTGGATCATTTTCACCGGAACTTATTCATGGTGATGAAGATGAACAGGCGATTGATCCTGAGGAGGATAGGGCTATACTGGAACGTAAACGAATTGCAGTCTTGGAAGAACAGCAGAGACGGATTCAAGAAGCAATGGCCACAAAACCTGCTCCACCAGAGGATAATTTTGAGCTTAAAGCCTCAAAAGCAATGGGAGTCATGGAGGAAGGCGATGCAGTTTTTGGATCTGGTGCTGAAGTGAACCTGGATTCACAGGTATATTGGTGGCATGACAAATATCGTCCAAGAAAACCGAAATATTTCAATCGGGTTCACACAGGATACGAGTGGAACAAATACAACCAGACTCACTATGATCATGACAATCCACCTCCAAAGATTGTCCAAGGATATAAGTTTAACATCTTCTATCCAGACCTTGTTGACAAGACAAAAGCTCCAACTTACACCATTGAAAAGGATGGAAACAGCAGCGAGACATGTATCATAAGGTTCCACGCGGGGCCACCGTATGAGGATATTGCGTTTCGAATTGTAAACAAAGAATGGGAGTACTCTCATAAGAAGGGGTTTAAGTGCACATTTGAGCGTGGTATTTTGCACGTATACTTCAACTTTAAGCGATATCGTTACCGCAGGTAA 2049 44.56 MGTHGRSSERKKEKTSSSRRRSRRRSDDSESDSDDSDSRDSSPVASSRKRRERLGGSRSSHRSRRRSSSRGRDSGDDSSNDSYCSDDGGRKKSKSSRKVTEEEISEYLAKKAQKKALRVAKKLKSQTVSGYSNDSNPFGDSNLNEKFVWRKKIERDVTQGVSLDAFSMKSEKKRQRERMAEIEKVKKRREERALEKAQHEEEMALLARERARAEFQDWEKKEEEFHFDQSKIRSEIRVRDGRSKPIDILSKQLNGSDDFDIVINEPYTVFKGLTVKEMEELRDDIKMHLDLDRATPTHIEYWEALLVVCDWELAEARKKDALDRARVRGEEPPAELLAEERGLHSSIETDVKNLLEGKTYGELEALQSQIESQMRSGTAKVVEYWEAVIKRLHIYKAKACLKEIHTKKLHEHLVRLEQPFEDDEEKVDQEIEMETERSLQVKAEEQELDIRAAETYSPDLLEEEENEEAGSFSPELIHGDEDEQAIDPEEDRAILERKRIAVLEEQQRRIQEAMATKPAPPEDNFELKASKAMGVMEEGDAVFGSGAEVNLDSQVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKTKAPTYTIEKDGNSSETCIIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHVYFNFKRYRYRR 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 8093533 8099610 - Cp4.1LG08g10630.1 Cpe08g01062 474028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe08g01062 682 Pfam Conserved mid region of cactin 208 405 IPR018816 -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 460 481 - -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 1 53 - -
Cpe08g01062 682 Pfam Cactus-binding C-terminus of cactin protein 558 682 IPR019134 GO:0005515
Cpe08g01062 682 PANTHER BNAC05G02180D PROTEIN 1 682 - -
Cpe08g01062 682 SMART CactinC_cactus_3 558 682 - -
Cpe08g01062 682 PANTHER POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3 1 682 - -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 1 140 - -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 69 113 - -
Cpe08g01062 682 Coils Coil 172 216 - -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 125 140 - -
Cpe08g01062 682 MobiDBLite consensus disorder prediction 54 68 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe08g01062 K25058 - csv:101205416 1125.15